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Properties
| Property Name | Value |
|---|
| Product | abc transporter b family member 28 |
| Orig transcript id | gnl|cribi|Naga_100670g3.7115.mrna |
| Orig protein id | gnl|cribi|Naga_100670g3.7115 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:635413..637815 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8709 ID=rna8709|Name=rna8709|organism=Nannochloropsis gaditana|type=mRNA|length=1480bp
GCTCGCGCGGCCTTACTCCACAAAGTGTCACGAAAAGCAGCAAACCTTTG
TCATTTGCTTGCTCGCCTCACAAGCGATCTTGCTCAACGTTCCTTATCCG
TGGCATTTCATCCCAGGAAAGTTGTAGCGGTTGTGACCATGTCATTACTC
TCGTCACGATCATTACGATGGCCGGTCTCCTCAAGGGCCTTGGTCTTCTG
TCTGGTCCTGATATTTTGGGCCGACACCATTGCCTACGTGCTTCCTCTTC
TCCGAACACTCGGGACCTCGACACGATCTCCCCCACAAAAAGCGCGGCTT
AATATGGCTACTCCTATACATCGTCCACAGAAAATTGCTCTACGGTCATG
TTTTGGATCAGGTTATCCGCCACGATCTCCAAGAATTCCTACCCTTCCAA
CCTCTGCTCCACGTGCATCCATCAGGCGTTTCAGCTCGATGCTTGCCTCA
TCCTTCATCCCTGCTTTCCTCCGTCGAAGGGGGGGAACGACAGCCAACCC
TCCTCCGGCCATCAGGCCATCTACGTCCCCCCCTCCTTCCTCCCCTCCCT
CCCTTGATGCCTCTCGCCAGCCCACGACCCCTCACGACCTTCAATGGGCC
GCTTTTGCAGGACCTTCAGACTCTCCTACCCGCCTGCGTAAACGAGACCT
GGCCATTGGGGGAGTGCTTTCCGTGCTGGCGACGGTTGCGGCCGTTTCCG
TGCCGTTAGGGTACGGGGGGGTCGTGAACGTCCTGTTGCTGCCTGCTGAA
ACGCCGCTGCTGGAAAGAAAAATGGCCTTTACCAAGGCCTTGCGTCTGCT
GGCATGCATCTACTCGGCGGAACCCTTTTTGACGTGGGTATACATCCGGC
ACATGACCGGATTGTTTTCCAAGGGCGTACTGAACCTCAAGAACGCTGTC
TTTACCAGGCTTTTGGAGCAGGACGTCGCCTTCTTCGACCGGGCAGGGCC
TGGGGAGATAACATCCTACCTGTCCCAAGACATCAGCGGGCTCAAAGATA
TACTGTACGGGAACCTGCAGAGAGACCGGGGTCTGCGCGCGCTCTTGGAG
GCAGTGGTGGGGACGATCCTCCTCTTCAAACTTCAACCCCGCCTTGGCCT
CGTCTTCTCCCTCGTGATCCCGACCGTGGCGACCATCACGGCCCAGCTCG
GACGACGCCTCACCCGTACCATCCTTCTAGAAGGTCGAGCGCTTGCCGCC
GAAAATGGCTGCGCCATCGAGGTGGTCCGCAACATCCGGGAGGTGAAGAG
CTTCGCCGCCGAGGGAAAAGAAACGGCACGGTATTTTTCGCGGTTGTGGC
GGACGCAAACCTTGTCCGCCCAGGCGGGTCGAAACCGGGGTTTGATGGAG
AGCTGTTCCCGTTTTGCGATTTATTTCTCGATATTCACCGTCTCCATGCT
GGGAGGGTCGTTGGTTCAACGCGGGGAGATGGGGGCAGCGAGCCTGGTGG
CCTTCATTGGGTACTGCTTCAGGTAGGGCG back to topprotein sequence of rna8709 >rna8709-protein ID=rna8709-protein|Name=rna8709|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQ
KARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSS
MLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHD
LQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLL
LPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNL
KNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLR
ALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITVSIPSA back to topmRNA from alignment at KK037249.1:635413..637815- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8709 ID=rna8709|Name=rna8709|organism=Nannochloropsis gaditana|type=mRNA|length=2403bp|location=Sequence derived from alignment at KK037249.1:635413..637815- (Nannochloropsis gaditana)
GCTCGCGCGGCCTTACTCCACAAAGTGTCACGAAAAGCAGCAAACCTTTG
TCATTTGCTTGCTCGCCTCACAAGCGATCTTGCTCAACGTTCCTTATCCG
TGGCATTTCATCCCAGGAAAGTTGTAGCGGTTGTGACCATGTCATTACTC
TCGTCACGATCATTACGATGGCCGGTCTCCTCAAGGGCCTTGGTCTTCTG
TCTGGTCCTGATATTTTGGGCCGACACCATTGCCTACGTGCTTCCTCTTC
TCCGAACACTCGGGACCTCGACACGATCTCCCCCACAAAAAGCGCGGCTT
AATATGGCTACTCCTATACATCGTCCACAGAAAATTGCTCTACGGTCATG
TTTTGGATCAGGTAGGAAACCGATCGACCTTTTCCCCAAGTCTCCTTGCT
CGCACGATCTTGCCGGCAAATGGAAGGAAATTGCCTTCCTATGACAAGAG
GGAGAATAAAATATGATAACAACGGCCTCCATCACTTCGTTATTTGTCTG
ATGCAAGTATATGACGAAGCAGCACGCGCTCGATTATCAAAAATCTTCCA
AACTCCCGGCCGTCCTGTGTGTTGCATCCTTTTCGAAGGCAAGGCCATGT
AGGTTCACAGCATTTCTCGCCCTTTCCGCCCAGGTTATCCGCCACGATCT
CCAAGAATTCCTACCCTTCCAACCTCTGCTCCACGTGCATCCATCAGGCG
TTTCAGCTCGATGCTTGCCTCATCCTTCATCCCTGCTTTCCTCCGTCGAA
GGGGGGGAACGACAGCCAACCCTCCTCCGGCCATCAGGCCATCTACGTCC
CCCCCTCCTTCCTCCCCTCCCTCCCTTGATGCCTCTCGCCAGCCCACGAC
CCCTCACGACCTTCAATGGGCCGCTTTTGCAGGACCTTCAGACTCTCCTA
CCCGCCTGCGTAAACGAGACCTGGCCATTGGGGGAGTGCTTTCCGTGCTG
GCGACGGTTGCGGCCGTTTCCGTGCCGTTAGGGTACGGGGGGGTCGTGAA
CGTCCTGTTGCTGCCTGCTGAAACGCCGCTGCTGGAAAGAAAAATGGCCT
TTACCAAGGTGCGTAAGCGTGATTCGTTGTTCGGAGGGGGCGATCCACCC
AAGGCGTGGCTGAGAAGGGGCTACCGTGGTAGGAAGTGGTGCTGGGAATC
CTCCGCCCCAGTGGTTGTGAAGCAAGCCAGCAGCATCAGGCTAGGGTTAA
CACATAGCTGTCATGGCGCAGGAATCTTGCTGGGATTGTGAAGGCTGTGA
CCGGAAGACTAAGGCCAAGTCAGGGTGACCGGGCCACGCACAATGAATAG
ATAGAAGCCATTCACTCGGAGGATATGGAATGTGCATCGCGCGAGAATCC
TTCCTCTATGTGTCTGACAGAATGAAAACAACCCCGCATGTGCCACCTCT
TCCTTTCGCAGGCCTTGCGTCTGCTGGCATGCATCTACTCGGCGGAACCC
TTTTTGACGTGGGTATACATCCGGCACATGACCGGATTGTTTTCCAAGGG
CGTACTGAACCTCAAGGTGGGAGAAATGCCTGCTCGTGACGGGGAGGGGG
CAAAAGGGGTATAAGGAAAAGATATCAGAGGTAAAAAGGATCCCTTCCAA
CGCCATGAGACACACATAGTATATGTGTATTATATATTTTGTGGTAGTAT
TAACCCTTACCCTAACACCAAGCCTTTCTCTGGCACGGGGCAGAACGCTG
TCTTTACCAGGCTTTTGGAGCAGGACGTCGCCTTCTTCGACCGGGCAGGG
CCTGGGGAGATAACATCCTACCTGTCCCAAGACATCAGCGGGCTCAAAGG
TAGGCAAAGAAACAGGGGCCATGGTGCCCGCGGCGAGGCCAACAAAGAGG
GAAAAAAAAGACCAAAAAGGAGGGTTGATAGAAGCTGTGCGTGCCTGCAG
TTACCTTAAGACAGGATTTCGCCGGGAGAAACAAATCTTTAACTTTTAGG
GGTCGGGATAGGGTGAAGGATCATCTAAATCCCATGATAACCCCGCCCCT
CCACCCCAGATATACTGTACGGGAACCTGCAGAGAGACCGGGGTCTGCGC
GCGCTCTTGGAGGCAGTGGTGGGGACGATCCTCCTCTTCAAACTTCAACC
CCGCCTTGGCCTCGTCTTCTCCCTCGTGATCCCGACCGTGGCGACCATCA
CGGTGAGCATTCCATCGGCGTGAACGGGCCCTGGGAGGCACAGAGGGGTC
CGTGGAGGGATGGGTGGCGCACTTGATATATATATATTTATGGAGTTCTC
GGACATATATGTATCGGCATCGCAACCTTGCCAACCTTGCCTTTCGTTTC
CTTCCTCCTCTCCTAGCACCTGTCCTTGTTCTGTGGGGGAAGGCGTGTCC
AACAAACAAGCAACCATACTACTAACCCCATTCCCCCCGCCTTCCCACCC
TCC back to topCoding sequence (CDS) from alignment at KK037249.1:635413..637815- >rna8709 ID=rna8709|Name=rna8709|organism=Nannochloropsis gaditana|type=CDS|length=5115bp|location=Sequence derived from alignment at KK037249.1:635413..637815- (Nannochloropsis gaditana)
ATATACTGTACGGGAACCTGCAGAGAGACCGGGGTCTGCGCGCGCTCTTG
GAGGCAGTGGTGGGGACGATCCTCCTCTTCAAACTTCAACCCCGCCTTGG
CCTCGTCTTCTCCCTCGTGATCCCGACCGTGGCGACCATCACGGTGAGCA
TTCCATCGGCGTGAAACGCTGTCTTTACCAGGCTTTTGGAGCAGGACGTC
GCCTTCTTCGACCGGGCAGGGCCTGGGGAGATAACATCCTACCTGTCCCA
AGACATCAGCGGGCTCAAAGGCCTTGCGTCTGCTGGCATGCATCTACTCG
GCGGAACCCTTTTTGACGTGGGTATACATCCGGCACATGACCGGATTGTT
TTCCAAGGGCGTACTGAACCTCAAGGTTATCCGCCACGATCTCCAAGAAT
TCCTACCCTTCCAACCTCTGCTCCACGTGCATCCATCAGGCGTTTCAGCT
CGATGCTTGCCTCATCCTTCATCCCTGCTTTCCTCCGTCGAAGGGGGGGA
ACGACAGCCAACCCTCCTCCGGCCATCAGGCCATCTACGTCCCCCCCTCC
TTCCTCCCCTCCCTCCCTTGATGCCTCTCGCCAGCCCACGACCCCTCACG
ACCTTCAATGGGCCGCTTTTGCAGGACCTTCAGACTCTCCTACCCGCCTG
CGTAAACGAGACCTGGCCATTGGGGGAGTGCTTTCCGTGCTGGCGACGGT
TGCGGCCGTTTCCGTGCCGTTAGGGTACGGGGGGGTCGTGAACGTCCTGT
TGCTGCCTGCTGAAACGCCGCTGCTGGAAAGAAAAATGGCCTTTACCAAG
ATGTCATTACTCTCGTCACGATCATTACGATGGCCGGTCTCCTCAAGGGC
CTTGGTCTTCTGTCTGGTCCTGATATTTTGGGCCGACACCATTGCCTACG
TGCTTCCTCTTCTCCGAACACTCGGGACCTCGACACGATCTCCCCCACAA
AAAGCGCGGCTTAATATGGCTACTCCTATACATCGTCCACAGAAAATTGC
TCTACGGTCATGTTTTGGATCAGATATACTGTACGGGAACCTGCAGAGAG
ACCGGGGTCTGCGCGCGCTCTTGGAGGCAGTGGTGGGGACGATCCTCCTC
TTCAAACTTCAACCCCGCCTTGGCCTCGTCTTCTCCCTCGTGATCCCGAC
CGTGGCGACCATCACGGTGAGCATTCCATCGGCGTGAAACGCTGTCTTTA
CCAGGCTTTTGGAGCAGGACGTCGCCTTCTTCGACCGGGCAGGGCCTGGG
GAGATAACATCCTACCTGTCCCAAGACATCAGCGGGCTCAAAGGCCTTGC
GTCTGCTGGCATGCATCTACTCGGCGGAACCCTTTTTGACGTGGGTATAC
ATCCGGCACATGACCGGATTGTTTTCCAAGGGCGTACTGAACCTCAAGGT
TATCCGCCACGATCTCCAAGAATTCCTACCCTTCCAACCTCTGCTCCACG
TGCATCCATCAGGCGTTTCAGCTCGATGCTTGCCTCATCCTTCATCCCTG
CTTTCCTCCGTCGAAGGGGGGGAACGACAGCCAACCCTCCTCCGGCCATC
AGGCCATCTACGTCCCCCCCTCCTTCCTCCCCTCCCTCCCTTGATGCCTC
TCGCCAGCCCACGACCCCTCACGACCTTCAATGGGCCGCTTTTGCAGGAC
CTTCAGACTCTCCTACCCGCCTGCGTAAACGAGACCTGGCCATTGGGGGA
GTGCTTTCCGTGCTGGCGACGGTTGCGGCCGTTTCCGTGCCGTTAGGGTA
CGGGGGGGTCGTGAACGTCCTGTTGCTGCCTGCTGAAACGCCGCTGCTGG
AAAGAAAAATGGCCTTTACCAAGATGTCATTACTCTCGTCACGATCATTA
CGATGGCCGGTCTCCTCAAGGGCCTTGGTCTTCTGTCTGGTCCTGATATT
TTGGGCCGACACCATTGCCTACGTGCTTCCTCTTCTCCGAACACTCGGGA
CCTCGACACGATCTCCCCCACAAAAAGCGCGGCTTAATATGGCTACTCCT
ATACATCGTCCACAGAAAATTGCTCTACGGTCATGTTTTGGATCAGATAT
ACTGTACGGGAACCTGCAGAGAGACCGGGGTCTGCGCGCGCTCTTGGAGG
CAGTGGTGGGGACGATCCTCCTCTTCAAACTTCAACCCCGCCTTGGCCTC
GTCTTCTCCCTCGTGATCCCGACCGTGGCGACCATCACGGTGAGCATTCC
ATCGGCGTGAAACGCTGTCTTTACCAGGCTTTTGGAGCAGGACGTCGCCT
TCTTCGACCGGGCAGGGCCTGGGGAGATAACATCCTACCTGTCCCAAGAC
ATCAGCGGGCTCAAAGGCCTTGCGTCTGCTGGCATGCATCTACTCGGCGG
AACCCTTTTTGACGTGGGTATACATCCGGCACATGACCGGATTGTTTTCC
AAGGGCGTACTGAACCTCAAGGTTATCCGCCACGATCTCCAAGAATTCCT
ACCCTTCCAACCTCTGCTCCACGTGCATCCATCAGGCGTTTCAGCTCGAT
GCTTGCCTCATCCTTCATCCCTGCTTTCCTCCGTCGAAGGGGGGGAACGA
CAGCCAACCCTCCTCCGGCCATCAGGCCATCTACGTCCCCCCCTCCTTCC
TCCCCTCCCTCCCTTGATGCCTCTCGCCAGCCCACGACCCCTCACGACCT
TCAATGGGCCGCTTTTGCAGGACCTTCAGACTCTCCTACCCGCCTGCGTA
AACGAGACCTGGCCATTGGGGGAGTGCTTTCCGTGCTGGCGACGGTTGCG
GCCGTTTCCGTGCCGTTAGGGTACGGGGGGGTCGTGAACGTCCTGTTGCT
GCCTGCTGAAACGCCGCTGCTGGAAAGAAAAATGGCCTTTACCAAGATGT
CATTACTCTCGTCACGATCATTACGATGGCCGGTCTCCTCAAGGGCCTTG
GTCTTCTGTCTGGTCCTGATATTTTGGGCCGACACCATTGCCTACGTGCT
TCCTCTTCTCCGAACACTCGGGACCTCGACACGATCTCCCCCACAAAAAG
CGCGGCTTAATATGGCTACTCCTATACATCGTCCACAGAAAATTGCTCTA
CGGTCATGTTTTGGATCAGATATACTGTACGGGAACCTGCAGAGAGACCG
GGGTCTGCGCGCGCTCTTGGAGGCAGTGGTGGGGACGATCCTCCTCTTCA
AACTTCAACCCCGCCTTGGCCTCGTCTTCTCCCTCGTGATCCCGACCGTG
GCGACCATCACGGTGAGCATTCCATCGGCGTGAAACGCTGTCTTTACCAG
GCTTTTGGAGCAGGACGTCGCCTTCTTCGACCGGGCAGGGCCTGGGGAGA
TAACATCCTACCTGTCCCAAGACATCAGCGGGCTCAAAGGCCTTGCGTCT
GCTGGCATGCATCTACTCGGCGGAACCCTTTTTGACGTGGGTATACATCC
GGCACATGACCGGATTGTTTTCCAAGGGCGTACTGAACCTCAAGGTTATC
CGCCACGATCTCCAAGAATTCCTACCCTTCCAACCTCTGCTCCACGTGCA
TCCATCAGGCGTTTCAGCTCGATGCTTGCCTCATCCTTCATCCCTGCTTT
CCTCCGTCGAAGGGGGGGAACGACAGCCAACCCTCCTCCGGCCATCAGGC
CATCTACGTCCCCCCCTCCTTCCTCCCCTCCCTCCCTTGATGCCTCTCGC
CAGCCCACGACCCCTCACGACCTTCAATGGGCCGCTTTTGCAGGACCTTC
AGACTCTCCTACCCGCCTGCGTAAACGAGACCTGGCCATTGGGGGAGTGC
TTTCCGTGCTGGCGACGGTTGCGGCCGTTTCCGTGCCGTTAGGGTACGGG
GGGGTCGTGAACGTCCTGTTGCTGCCTGCTGAAACGCCGCTGCTGGAAAG
AAAAATGGCCTTTACCAAGATGTCATTACTCTCGTCACGATCATTACGAT
GGCCGGTCTCCTCAAGGGCCTTGGTCTTCTGTCTGGTCCTGATATTTTGG
GCCGACACCATTGCCTACGTGCTTCCTCTTCTCCGAACACTCGGGACCTC
GACACGATCTCCCCCACAAAAAGCGCGGCTTAATATGGCTACTCCTATAC
ATCGTCCACAGAAAATTGCTCTACGGTCATGTTTTGGATCAGATATACTG
TACGGGAACCTGCAGAGAGACCGGGGTCTGCGCGCGCTCTTGGAGGCAGT
GGTGGGGACGATCCTCCTCTTCAAACTTCAACCCCGCCTTGGCCTCGTCT
TCTCCCTCGTGATCCCGACCGTGGCGACCATCACGGTGAGCATTCCATCG
GCGTGAAACGCTGTCTTTACCAGGCTTTTGGAGCAGGACGTCGCCTTCTT
CGACCGGGCAGGGCCTGGGGAGATAACATCCTACCTGTCCCAAGACATCA
GCGGGCTCAAAGGCCTTGCGTCTGCTGGCATGCATCTACTCGGCGGAACC
CTTTTTGACGTGGGTATACATCCGGCACATGACCGGATTGTTTTCCAAGG
GCGTACTGAACCTCAAGGTTATCCGCCACGATCTCCAAGAATTCCTACCC
TTCCAACCTCTGCTCCACGTGCATCCATCAGGCGTTTCAGCTCGATGCTT
GCCTCATCCTTCATCCCTGCTTTCCTCCGTCGAAGGGGGGGAACGACAGC
CAACCCTCCTCCGGCCATCAGGCCATCTACGTCCCCCCCTCCTTCCTCCC
CTCCCTCCCTTGATGCCTCTCGCCAGCCCACGACCCCTCACGACCTTCAA
TGGGCCGCTTTTGCAGGACCTTCAGACTCTCCTACCCGCCTGCGTAAACG
AGACCTGGCCATTGGGGGAGTGCTTTCCGTGCTGGCGACGGTTGCGGCCG
TTTCCGTGCCGTTAGGGTACGGGGGGGTCGTGAACGTCCTGTTGCTGCCT
GCTGAAACGCCGCTGCTGGAAAGAAAAATGGCCTTTACCAAGATGTCATT
ACTCTCGTCACGATCATTACGATGGCCGGTCTCCTCAAGGGCCTTGGTCT
TCTGTCTGGTCCTGATATTTTGGGCCGACACCATTGCCTACGTGCTTCCT
CTTCTCCGAACACTCGGGACCTCGACACGATCTCCCCCACAAAAAGCGCG
GCTTAATATGGCTACTCCTATACATCGTCCACAGAAAATTGCTCTACGGT
CATGTTTTGGATCAG back to top
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