rna8701, rna8701 (mRNA) Nannochloropsis gaditana

Overview
Namerna8701
Unique Namerna8701
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length696
Alignment locationKK037249.1:623002..624537 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100353g8.3230.mrna
Orig protein idgnl|cribi|Naga_100353g8.3230
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:623002..624537 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100353g8gene8434Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8701rna8701-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22003.1cds8672Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8701 ID=rna8701|Name=rna8701|organism=Nannochloropsis gaditana|type=mRNA|length=696bp
ATGACTCCGAACTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTT
GCTCGCCTTGGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCC
TCAAGTCCATCAAGACGTTCGAAAGGACGCAGATGAACAAAGACAAGTGG
AGCATGAAGGCCCACCTGGAGGACCCTACTCTTGCTGTGGTGTCCGGCAT
TGGCACAAGTGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCT
TGGACACAGCGACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCC
AAGGGGGCGAGGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAG
CAAGCCCCCCAAGGGTGTAGGAAAGTCACACAACTCGACGGGAGGATACT
ACAGCGTGTCAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTC
GATTTCCCCTTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTC
CCAGACATTGACCGGTTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCA
CATGCGTCCCAGGGCCCACAGCTGCCCCCACAGCTGCCCCCACCGTCTTT
TCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGACCACATGA
GTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGATGTGA
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protein sequence of rna8701

>rna8701-protein ID=rna8701-protein|Name=rna8701|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MKGTTVSAIQGPLLQAIVDATNLRLADLSRPLSRIKPDFSCPRSVFPSAA
ASHRAAVCYLLHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIG
DEENVVSRHYEQFAETIPVFPFEAYNFSSPSVAATLAQQIYGYSGVGHRE
KK
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mRNA from alignment at KK037249.1:623002..624537-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8701 ID=rna8701|Name=rna8701|organism=Nannochloropsis gaditana|type=mRNA|length=1536bp|location=Sequence derived from alignment at KK037249.1:623002..624537- (Nannochloropsis gaditana)
CCCTTCCTCCCTCCCTCCCTCCCTCCCTCTTTCCCTCCCTCCCTCCCTCT
TTCCCTCCCTCCCTTCTGCCTTGCTTGTCTGTATGCCCCTGCGTTGTTCT
TATCCCACCCTCGAACTCCTCATCTTTCTCCCATTCTTTCCTCAAATTTC
GTCTATTCTTTAGGAGGGCCGCCTGGTCGAGGCATTGCGAACGCTTCGCG
CAATTTTTGCTTCCGCCCACAGCATGAAAGGCACCACCGTCTCCGCCATT
CAAGTATCGTTTTTCTCTTCCCACCGCTCCCCTTCGTTTGTTTGGCTCTT
TTTCCCTCCCTCCTTCCTTCCCTTCCTTCCTTCGCTTCCCTCCCATTTTT
TAAATCGCATATTCCTGTCCAACCGAAGTGGGCACAATTTCCTCCCTCCT
CCCACTCTCCTTTTTCCCTCTCCCCCCTTCTCCCCCCCCCCCCAAGGGAC
CTTTGCTGCAGGCAATTGTGGACGCCACGAATCTCCGCCTTGCCGATCTC
TCTCGGCCTCTTTCGAGAATAAAGCCTGACTTCTCATGCCCTCGTTCCGT
TTTCCCTTCCGCCGCAGCTTCTCACCGTGCCGCAGTCTGCTATCTTCTTC
ATGAATGGCTTCGGTCAGCATTTTCGCCTTTTATACCCTTTCTCTTTGTC
TCTTGAAAATTTCTTAGCGCCCTCCCTCTTCCTTGCCGACCCTTTTTGGT
CCCTTGACTCGACTGGTATTTCACGTAGGACGCGATTCTAAGACCTCACC
CCTTTCTCTTCCCTTTCTACCTCCTTCTCCACCTCCACGCTCCTCATCAG
CTCGCTAAGCCCAGATCTCTTTCCCTCCTTCCCGCAATCCGAATCCTCGT
ACCGGGAGCAAATACGAGCTGCAGGGGGCGAGGAGGAGGAGGGAAACATA
GGGGACGAGGAGAACGTCGTCAGCCGCCACTACGAACAATTCGCGGAAAC
GATCCCAGTCTTTCCGTTCGAGGCATATAATTTCTCTTCGCCTTCCGTAG
CCGCTACACTCGCCCAACAAATTTATGGTTATTCTGGGGTCGGGCACAGA
GAGAAGAAATAAAGAATTGTATAAAAAATTCGGAAGTTTCCAAGTGGTGA
AAAGAAAGGGTACGTCGTACATGTATAAGGTTTGAGTCATTTTACCGAGT
CGTTATTTAGGTCTATTCAAGGAAGTTTTAGTTTTGGAGTCAATTCATGT
ATACACCAGGGAAGAATTTGGTGAAAGATACAGGAATGATCAGCTAGTCT
TATATCGTAATATCTACTTTCACTATCGTTTAGCATCTAGACTGGCCCCC
GATGTGCACTTCGACACGGGATTAATGAGAACTTATTTGCATTCCGACGC
TAAGCGTGATTCAATGAACGTCGCATCAATTTGCTTGAAAGTGTATTCCC
GTGCCAATGATTCAACAAATGATAGTTGTCCTTCAACGTCGATCAACATG
CTTAGGTCTAGCAAGATCAATTCTTATTGATTTACATCACGTCTTTCTGC
ATGTTTCCGCAAAAGGGGTCAGATCCAATATTTCCG
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Coding sequence (CDS) from alignment at KK037249.1:623002..624537-

>rna8701 ID=rna8701|Name=rna8701|organism=Nannochloropsis gaditana|type=CDS|length=1377bp|location=Sequence derived from alignment at KK037249.1:623002..624537- (Nannochloropsis gaditana)
CTCGCTAAGCCCAGATCTCTTTCCCTCCTTCCCGCAATCCGAATCCTCGT
ACCGGGAGCAAATACGAGCTGCAGGGGGCGAGGAGGAGGAGGGAAACATA
GGGGACGAGGAGAACGTCGTCAGCCGCCACTACGAACAATTCGCGGAAAC
GATCCCAGTCTTTCCGTTCGAGGCATATAATTTCTCTTCGCCTTCCGTAG
CCGCTACACTCGCCCAACAAATTTATGGTTATTCTGGGGTCGGGCACAGA
GAGAAGAAATAAGGACCTTTGCTGCAGGCAATTGTGGACGCCACGAATCT
CCGCCTTGCCGATCTCTCTCGGCCTCTTTCGAGAATAAAGCCTGACTTCT
CATGCCCTCGTTCCGTTTTCCCTTCCGCCGCAGCTTCTCACCGTGCCGCA
GTCTGCTATCTTCTTCATGAATGGCTTCGATGAAAGGCACCACCGTCTCC
GCCATTCAACTCGCTAAGCCCAGATCTCTTTCCCTCCTTCCCGCAATCCG
AATCCTCGTACCGGGAGCAAATACGAGCTGCAGGGGGCGAGGAGGAGGAG
GGAAACATAGGGGACGAGGAGAACGTCGTCAGCCGCCACTACGAACAATT
CGCGGAAACGATCCCAGTCTTTCCGTTCGAGGCATATAATTTCTCTTCGC
CTTCCGTAGCCGCTACACTCGCCCAACAAATTTATGGTTATTCTGGGGTC
GGGCACAGAGAGAAGAAATAAGGACCTTTGCTGCAGGCAATTGTGGACGC
CACGAATCTCCGCCTTGCCGATCTCTCTCGGCCTCTTTCGAGAATAAAGC
CTGACTTCTCATGCCCTCGTTCCGTTTTCCCTTCCGCCGCAGCTTCTCAC
CGTGCCGCAGTCTGCTATCTTCTTCATGAATGGCTTCGATGAAAGGCACC
ACCGTCTCCGCCATTCAACTCGCTAAGCCCAGATCTCTTTCCCTCCTTCC
CGCAATCCGAATCCTCGTACCGGGAGCAAATACGAGCTGCAGGGGGCGAG
GAGGAGGAGGGAAACATAGGGGACGAGGAGAACGTCGTCAGCCGCCACTA
CGAACAATTCGCGGAAACGATCCCAGTCTTTCCGTTCGAGGCATATAATT
TCTCTTCGCCTTCCGTAGCCGCTACACTCGCCCAACAAATTTATGGTTAT
TCTGGGGTCGGGCACAGAGAGAAGAAATAAGGACCTTTGCTGCAGGCAAT
TGTGGACGCCACGAATCTCCGCCTTGCCGATCTCTCTCGGCCTCTTTCGA
GAATAAAGCCTGACTTCTCATGCCCTCGTTCCGTTTTCCCTTCCGCCGCA
GCTTCTCACCGTGCCGCAGTCTGCTATCTTCTTCATGAATGGCTTCGATG
AAAGGCACCACCGTCTCCGCCATTCAA
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Synonyms
Publications