EWM22003.1, cds8672 (CDS) Nannochloropsis gaditana

Overview
NameEWM22003.1
Unique Namecds8672
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:624285..624314 -
Alignment locationKK037249.1:623925..624091 -
Alignment locationKK037249.1:623476..623737 -

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Properties
Property NameValue
Protein idEWM22003.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100353g8.3230.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:624285..624314 -
KK037249.1supercontigKK037249.1:623925..624091 -
KK037249.1supercontigKK037249.1:623476..623737 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22003.1 vs. NCBI_GenBank
Match: gi|585102399|gb|EWM22003.1| (hypothetical protein Naga_100353g8 [Nannochloropsis gaditana])

HSP 1 Score: 313.538 bits (802), Expect = 2.527e-108
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 
Query:    1 MKGTTVSAIQGPLLQAIVDATNLRLADLSRPLSRIKPDFSCPRSVFPSAAASHRAAVCYLLHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIGDEENVVSRHYEQFAETIPVFPFEAYNFSSPSVAATLAQQIYGYSGVGHREKK 152
            MKGTTVSAIQGPLLQAIVDATNLRLADLSRPLSRIKPDFSCPRSVFPSAAASHRAAVCYLLHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIGDEENVVSRHYEQFAETIPVFPFEAYNFSSPSVAATLAQQIYGYSGVGHREKK
Sbjct:    1 MKGTTVSAIQGPLLQAIVDATNLRLADLSRPLSRIKPDFSCPRSVFPSAAASHRAAVCYLLHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIGDEENVVSRHYEQFAETIPVFPFEAYNFSSPSVAATLAQQIYGYSGVGHREKK 152
[Close]
BLAST of EWM22003.1 vs. NCBI_GenBank
Match: gi|553178591|ref|XP_005852577.1| (hypothetical protein NGA_0721400 [Nannochloropsis gaditana CCMP526] >gi|422295957|gb|EKU23256.1| hypothetical protein NGA_0721400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 248.054 bits (632), Expect = 6.914e-82
Identity = 138/152 (90.79%), Postives = 141/152 (92.76%), Query Frame = 0 
Query:    1 MKGTTVSAIQGPLLQAIVDATNLRLADLSRPLSRIKPDFSCPRSVFPSAAASHRAAVCYLLHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIGDEENVVSRHYEQFAETIPVFPFEAYNFSSPSVAATLAQQIYGYSGVGHREKK 152
            +KG TVSAIQ     AIVDATNLRLADLSRP SR+KPDFSCPRSVFPSAAASHRAAVCY LHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIGDEENVVSRH+EQF ETIPVFPFEA  FSSPSVAATLAQQIYGYSGVGHREKK
Sbjct:   38 IKGITVSAIQ-----AIVDATNLRLADLSRPFSRVKPDFSCPRSVFPSAAASHRAAVCYFLHEWLRSLSPDLFPSFPQSESSYREQIRAAGGEEEEGNIGDEENVVSRHHEQFTETIPVFPFEADYFSSPSVAATLAQQIYGYSGVGHREKK 184
The following BLAST results are available for this feature:
BLAST of EWM22003.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102399|gb|EWM22003.1|2.527e-108100.00hypothetical protein Naga_100353g8 [Nannochloropsi... [more]
gi|553178591|ref|XP_005852577.1|6.914e-8290.79hypothetical protein NGA_0721400 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8701rna8701Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications