rna8699, rna8699 (mRNA) Nannochloropsis gaditana

Overview
Namerna8699
Unique Namerna8699
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length393
Alignment locationKK037249.1:618405..620439 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100353g5.3229.mrna
Orig protein idgnl|cribi|Naga_100353g5.3229
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:618405..620439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100353g5gene8432Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8699rna8699-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22002.1cds8670Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8699 ID=rna8699|Name=rna8699|organism=Nannochloropsis gaditana|type=mRNA|length=393bp
ATGTACGAGCTGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGT
GTGCGAGGCCGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACC
CCGTAAACATCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTTTTCTT
ACCAACTTTCCGGACTCCAAGGGGGCGAAGTGCAAGATGATGGGGGCACG
CGTGTCAATCAGGGCCAGCAAGCCCCCCAAGGATGTGAAGGTTAAGACGT
ACAACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTGGTGTG
CAGTTCCAGGAAGACCCTGTGATTTTCCCCTTGACGGCCGAGCTTACCGT
CCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTGA
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protein sequence of rna8699

>rna8699-protein ID=rna8699-protein|Name=rna8699|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MYEMVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTICC
DCFIFCRTSNVPHLILLFRRHRNLTKRTIMRRGLSLLALGLTLALTTGQM
LSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTAD
DTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTG
GYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTR
KVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM
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mRNA from alignment at KK037249.1:618405..620439-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8699 ID=rna8699|Name=rna8699|organism=Nannochloropsis gaditana|type=mRNA|length=2035bp|location=Sequence derived from alignment at KK037249.1:618405..620439- (Nannochloropsis gaditana)
ATGTACGAGATGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGT
GTGCGAGGCCGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACC
CCGTAAACATCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTTGTTGT
GATTGCTTTATCTTTTGGTTGCTATCAAATCATTAGCTGTTGGGGTTTCT
GGTGCAGCAACTGTGCATGCTATGATGTACAATAACAACTACATGGCATG
CCGTGCTTTCTATCCACGTTCGCACGTAGAAGATGAGCAGCTTATCGTTT
TTCAGACCCCTTTCCCTCCCTTGCGGACCTTGTTTGGGTCAACTTACTTA
AGTTTCATTTCGGATGGGATCACCTCACCCCTCGCTGTTCCATGTCTACC
TCCTTCTTTACATCCACTTCCCATATCAGCTTCCTCAGACCGCACCTTGG
TTGTCACTTGGCTGAAGGTTCATTCTACATGGGATGCTAATTATTGACCT
CATGCCTCTCTGTTCCGTTTTGACCTCCTTGTCTACCTCGTCTCTCCTCA
CATGCTTTCTGAGCCTGGATATCTTTCCCTCCTTCTCTGAGCCTGGGTCT
CTTTCCCTCCTTCTCTGCTGTCCCTTTGTATGTCTCTGCTGATGAGCTCG
CTTAAGCGCCTTTCATGGTGCATGGGTATTAGTCCGTCGTTGCCTCTTTG
TTCCAGCTCTCCGTTTGAACGGCTTTTTAAGATCATCGTAACGGCTGTTT
GACCGTTTCCGAAGACAACGAAAAAACAGGCTTCGTCTCGTGCCGTCGCT
TGGTGTGCCTAGCTGTTTGTAGATCACGATGTCATCTGAGTAGTATGGGA
AAATGACTCTTGCCTCTCTTGGTGACGACGTTTGCGTTGAAACCCTGACA
TGGCATAGGACGACTGTGAGCATGTTTATAAAAGCTCGGCCGCCGTCTGA
AACGAGTCTTTACGTAAGCTTTGGCGTGTATGTTTCCGTTGGGGGTCGCC
ATGCATACTCAGGAGATGCCGCGAATGAAGCTCTTGTTTTATGAATCCTT
TGCCAAGCTAAGTACTACTTCTGAACAAGTGTCAACCTACGAGTCGCCGC
TTACGTAGGAGCCAGCTTGTCAAACAGATTCAAGCTTTATATTGACACGA
CGTGCTGATAGAAGCGCAGCTCCATGACTCCGTACGGCTACTGGACGTGT
GACAGACAGACTGCCCGTCTTTGGAGCTTGCCCTTGCTCACTCCGGTACA
AGCCGCACAAGCAATGTTCCACATCTGATCCTTCTCTTTCGACGCCACAG
GAACTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCTCGCCT
TGGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAAGTCC
ATCAAGACGTTCGAAAGGACGCAGATGAATAAAGACAAGTGGAGCATGAA
GGCCCACCTGGAGGATCCCACTCTTGCTGTGGTGTCCGGCATTGGCACAA
GTGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGACACA
GCGACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGGGGGC
GAGGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAGCCCC
CCAAGGGTGTAGGAAAGTCGCACAACTCGACGGGAGGATACTACAGCGTG
TCAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCC
CTTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCAGACAT
TGACCGGGTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGTC
CCTGGACCCACAGCTGCCCCCACAGCTGCCCCCACCGGTGCGCCAATTTT
TGGTTAGGTGCCTTAATGCCTTCCTTAGCACTAGTCTTTTCTGGTCCTTG
GCGTAAAATTATTGAAACTCTCAGGATTGGACCACATGAGTTTCGATGCA
AATCTTCTACTTGGAAGAACTTGCAGGTGATGTGA
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Coding sequence (CDS) from alignment at KK037249.1:618405..620439-

>rna8699 ID=rna8699|Name=rna8699|organism=Nannochloropsis gaditana|type=CDS|length=2709bp|location=Sequence derived from alignment at KK037249.1:618405..620439- (Nannochloropsis gaditana)
TCTTTTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGACCA
CATGAGTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGATGTG
ACCGCACAAGCAATGTTCCACATCTGATCCTTCTCTTTCGACGCCACAGG
AACTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCTCGCCTT
GGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAAGTCCA
TCAAGACGTTCGAAAGGACGCAGATGAATAAAGACAAGTGGAGCATGAAG
GCCCACCTGGAGGATCCCACTCTTGCTGTGGTGTCCGGCATTGGCACAAG
TGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGACACAG
CGACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGGGGGCG
AGGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAGCCCCC
CAAGGGTGTAGGAAAGTCGCACAACTCGACGGGAGGATACTACAGCGTGT
CAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCC
TTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCAGACATT
GACCGGGTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGTCC
CTGGACCCACAGCTGCCCCCACAGCTGCCCCCACCGATGTACGAGATGGT
GACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGTGTGCGAGGCCGATG
ACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACCCCGTAAACATCTTG
TCGAAAGGAAAATGCTTTTGGTACACAATTTGTTGTGATTGCTTTATCTT
TTGTCTTTTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATTGGA
CCACATGAGTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGTGAT
GTGACCGCACAAGCAATGTTCCACATCTGATCCTTCTCTTTCGACGCCAC
AGGAACTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCTCGC
CTTGGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAAGT
CCATCAAGACGTTCGAAAGGACGCAGATGAATAAAGACAAGTGGAGCATG
AAGGCCCACCTGGAGGATCCCACTCTTGCTGTGGTGTCCGGCATTGGCAC
AAGTGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGACA
CAGCGACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGGGG
GCGAGGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAGCC
CCCCAAGGGTGTAGGAAAGTCGCACAACTCGACGGGAGGATACTACAGCG
TGTCAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGATTTC
CCCTTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCAGAC
ATTGACCGGGTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCG
TCCCTGGACCCACAGCTGCCCCCACAGCTGCCCCCACCGATGTACGAGAT
GGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGTGTGCGAGGCCG
ATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACCCCGTAAACATC
TTGTCGAAAGGAAAATGCTTTTGGTACACAATTTGTTGTGATTGCTTTAT
CTTTTGTCTTTTCTGGTCCTTGGCGTAAAATTATTGAAACTCTCAGGATT
GGACCACATGAGTTTCGATGCAAATCTTCTACTTGGAAGAACTTGCAGGT
GATGTGACCGCACAAGCAATGTTCCACATCTGATCCTTCTCTTTCGACGC
CACAGGAACTTAACCAAGCGTACCATCATGCGACGTGGTCTTTCTTTGCT
CGCCTTGGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCA
AGTCCATCAAGACGTTCGAAAGGACGCAGATGAATAAAGACAAGTGGAGC
ATGAAGGCCCACCTGGAGGATCCCACTCTTGCTGTGGTGTCCGGCATTGG
CACAAGTGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGG
ACACAGCGACCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAG
GGGGCGAGGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAA
GCCCCCCAAGGGTGTAGGAAAGTCGCACAACTCGACGGGAGGATACTACA
GCGTGTCAGGCAGCTTCCGACGTGTGCAGCTCCAGGAAGATCCCGTCGAT
TTCCCCTTGACGGCCGAGCTTACCGTGCCAGGCGTCGGCACTCTCTCCCA
GACATTGACCGGGTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACAT
GCGTCCCTGGACCCACAGCTGCCCCCACAGCTGCCCCCACCGATGTACGA
GATGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGTGTGCGAGG
CCGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACCCCGTAAAC
ATCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTTGTTGTGATTGCTT
TATCTTTTG
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Synonyms
Publications