EWM22002.1, cds8670 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585102398|gb|EWM22002.1| (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana]) HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 Query: 1 MYEMVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTICCDCFIFCRTSNVPHLILLFRRHRNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 300 MYEMVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTICCDCFIFCRTSNVPHLILLFRRHRNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM Sbjct: 1 MYEMVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTICCDCFIFCRTSNVPHLILLFRRHRNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 300
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585102400|gb|EWM22004.1| (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana]) HSP 1 Score: 462.996 bits (1190), Expect = 1.387e-163 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 Query: 73 NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 300 NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM Sbjct: 4 NLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAAPTAAPTVFSGPWRKIIETLRIGPHEFRCKSSTWKNLQVM 231
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585102401|gb|EWM22005.1| (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana]) HSP 1 Score: 331.643 bits (849), Expect = 2.426e-111 Identity = 189/220 (85.91%), Postives = 197/220 (89.55%), Query Frame = 0 Query: 52 CFIFCRTSNVPHLILLFRRHRNLTKRTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVG-KSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPG---PTAAPTAAPT 267 C RTSNVPHLILLFRRHRN TK TIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERT+MNKDKWSMK +LEDPTLAVVSGIGTSGLTVTLLDTADDTLDTA+FAAGDCMVRKNSKGA+CKMMGARVSIRASKPPKGV K++NSTGGYYSVSGSFR VQLQEDPV PLTAELTV GVGTLSQTLT CSV+G T + TCVPG PT APTAA T Sbjct: 40 CSGTSRTSNVPHLILLFRRHRNFTKLTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSIRASKPPKGVKVKTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVRGAGTTRTTCVPGPIIPTNAPTAAST 259
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|553178588|ref|XP_005852576.1| (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >gi|422295956|gb|EKU23255.1| hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 306.99 bits (785), Expect = 1.386e-102 Identity = 150/157 (95.54%), Postives = 154/157 (98.09%), Query Frame = 0 Query: 99 QMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCV 255 QMLSLKSIKTFERTQMNKDKWSMK HLEDPTLAVVSGIGT+GLTVTLLD A DTLDTA+FAAGDCMVRK+SKGARCKMMGARVSIRASKPPKGVGKSHNSTGGY+SVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCV Sbjct: 20 QMLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSIRASKPPKGVGKSHNSTGGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCV 176
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585112674|gb|EWM30045.1| (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 176.407 bits (446), Expect = 3.706e-51 Identity = 98/195 (50.26%), Postives = 129/195 (66.15%), Query Frame = 0 Query: 80 MRRGLSLLALGLTLALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGV---GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCS--VKGT-KTRKVTCVPGP---TAAPTAA 265 MRR LSLLALG+TL +T GQ +LK++K ER++ +D+WSMK +L++P + VV IG GLTV LLD + D L + FAA +C + +N +G RCK MGARVSI+ ++ PKG + NSTGGYY SG FRR+Q +DPV PLT ++ V G TL ++ CS KG + K+TC PGP T APTAA Sbjct: 1 MRRILSLLALGVTLVMTAGQEFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRRPKGAKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVV-GSTTLPAIVSTCSERTKGAGRITKITCTPGPAPVTPAPTAA 194
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585112664|gb|EWM30036.1| (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 181.03 bits (458), Expect = 8.031e-51 Identity = 94/190 (49.47%), Postives = 128/190 (67.37%), Query Frame = 0 Query: 78 TIMRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGV---GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVG-TLSQTLTGCS--VKGT-KTRKVTCVPGPT 259 T MRR LLALG+TL +T GQ + +LK++K ++++ +D+WSMK +L+DPT+ VV IG GLTV L D A TL++ FAA DC +R+N +G CK GARVSI+ S+ PKG ++NSTGGYYS SG FRR+Q +DP+ FPLT L VP + S ++ CS +KG +T ++TC PGPT Sbjct: 18 TTMRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGAYVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPT 207
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|553189589|ref|XP_005855033.1| (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >gi|422294031|gb|EKU21331.1| hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 166.007 bits (419), Expect = 3.475e-47 Identity = 81/157 (51.59%), Postives = 109/157 (69.43%), Query Frame = 0 Query: 80 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASKPPKGV---GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGV 232 MRR LLALG+TL +T GQ + +LK++K ++++ +D+WSMK +L+DPT+ VV IG GLTV L D A TL++ FAA DC +R+N +G CK GARVSI+ S+ PKG ++NSTGGYYS SG FRR+Q +DP+ FPLT L VP + Sbjct: 1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRRPKGANVQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSI 157
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585108538|gb|EWM26485.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 160.614 bits (405), Expect = 2.576e-44 Identity = 98/194 (50.52%), Postives = 121/194 (62.37%), Query Frame = 0 Query: 80 MRRGLSLLALGLT----LALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRAS-----KPPKGV-GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVT---CVPGPTA 260 MR LSLL LG+T L T GQ L+LKSI+T +R+ NKD W MK ++ DP+L +V IG +GLTV L D A D L+T FAA DC V + + A CK+ GARVSI+ S K PK V KS+NSTGGYYSV+G+FR + E+PV PLTA L + G LS TLT C K+ + T C PGP A Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRING-SVLSDTLTSCYDLARKSGRNTISHCEPGPPA 193
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585109630|gb|EWM27399.1| (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 160.614 bits (405), Expect = 3.274e-44 Identity = 103/201 (51.24%), Postives = 122/201 (60.70%), Query Frame = 0 Query: 80 MRRGLSLLALGLTLA----LTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRAS-----KPPKGV-GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVT---CVPGPTAAPTAAPT 267 MR LSLLALG+TL T GQ L+LKSI+ +R+ NKD W MK + DP+L +VS IG GLTV L D A D L+T TFAA DC V + + A CK+ GARVSI+ S K PK V KS+NSTGGYYSV+G+FR + E+PV PLTA LTV LS TLT C K + T C PGP P PT Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTV-DESVLSDTLTLCYNLPRKNGRNTISHCEPGP---PVPTPT 197
BLAST of EWM22002.1 vs. NCBI_GenBank
Match: gi|585108537|gb|EWM26484.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 160.229 bits (404), Expect = 8.492e-44 Identity = 98/194 (50.52%), Postives = 121/194 (62.37%), Query Frame = 0 Query: 80 MRRGLSLLALGLT----LALTTGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRAS-----KPPKGV-GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVKGTKTRKVT---CVPGPTA 260 MR LSLL LG+T L T GQ L+LKSI+T +R+ NKD W MK ++ DP+L +V IG +GLTV L D A D L+T FAA DC V + + A CK+ GARVSI+ S K PK V KS+NSTGGYYSV+G+FR + E+PV PLTA L + G LS TLT C K+ + T C PGP A Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRING-SVLSDTLTSCYDLARKSGRNTISHCEPGPPA 193 The following BLAST results are available for this feature:
BLAST of EWM22002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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