rna8698, rna8698 (mRNA) Nannochloropsis gaditana

Overview
Namerna8698
Unique Namerna8698
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length780
Alignment locationKK037249.1:617141..618334 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100353g4.3228.mrna
Orig protein idgnl|cribi|Naga_100353g4.3228
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:617141..618334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100353g4gene8431Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8698rna8698-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22001.1cds8669Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8698 ID=rna8698|Name=rna8698|organism=Nannochloropsis gaditana|type=mRNA|length=780bp
ATGCTATCGGACAGCTTCGAGCACGTTTGTAAAGCTCGGCCGCTATCTGA
AACAAATCTTAATGTAAGTACACTCTCCTCACCAGCTCCCTCCCTTAATC
CGAGTCTTGCGCTTGCTTGCTCCGGTACAAGCCGCACAAGCAATGTTCCA
CATCTAATACTGCTCTTTCGACGCCACAGGAACTTCACCAAGCTTACCAT
CATGCGACGTGGTCTTTCTTTGCTCGCCTTGGGGCTTACCCTTGCGCTTA
CCACCGGACAAATGCTCTCCCTCAAGTCCATCAAGACGTTCGAAAGAACG
CGGATGAATAAAGACAAGTGGAGCATGAAGGGCAACCTGGAGGATCCCAC
TCTTGCTGTGGTGTCCGGCATTGGCACAAGTGGTCTGACTGTGACGCTGC
TCGATACGGCGGATGACACCTTGGACACAGCGTCCTTCGCGGCGGGCGAC
TGCATGGTGCGGAAGAACTCCAAGGGGGCGAAGTGCAAGATGATGGGGGC
ACGCGTGTCAATCAGGGCCAGCAAGCCCCCCAAGGGTGTGAAGGTTAAGA
CGTACAACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTGGT
GTGCAACTCCAGGAAGACCCTGTGATTTCCCCCTTGACGGCCGAGCTTAC
CGTCCAAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTCTGTCA
GGGGGGCTGGGACAACGAGGACCACATGCGTCCCAGGGCCCATCATTCCC
ACGAATGCCCCCACAGCTGCGTCCACGTAG
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protein sequence of rna8698

>rna8698-protein ID=rna8698-protein|Name=rna8698|organism=Nannochloropsis gaditana|type=polypeptide|length=130bp
MYELVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTIFL
TNFPDSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGV
QFQEDPVIFPLTAELTVPGVGTLSQTLTDC
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mRNA from alignment at KK037249.1:617141..618334-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8698 ID=rna8698|Name=rna8698|organism=Nannochloropsis gaditana|type=mRNA|length=1194bp|location=Sequence derived from alignment at KK037249.1:617141..618334- (Nannochloropsis gaditana)
ATGTACGAGCTGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGT
GTGCGAGGCCGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACC
CCGTAAACATCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTTGTTGT
GATTGCTTTATCTTTTGGTTGCTATCAAATCATTAGCTGTTGGGGTTTCT
GGTGCAGCAACTGTGCATGCTATGATGTACAATAACAACTACATGGCATG
CCGTGCTTTCTATCCACGTTCGCACGTAGAAGATGAGCAGCTTATCGTTT
TTCAGACCCCTTTCCCTCCCTTGCGGACCTTGTTTGGGTCAACTTACTTA
AGTTTCATTTCGGATGGGATCACCTCACCCCTCGCTGTTCCATGTCTACC
TCCTTCTTTACATCCACTTCCCATATCAGCTTCCTCAGACCGCACCTTGG
TTGTCACTTGGCTGAAGGTTCATTCTACATGGGATGCTAATTATTGACCT
CACGCCTCCCTGTTCCGTTTTGACCTCCTTGTCTACCTCCACTCTCCTCA
GATGCTTTTTGAGCCCGGGTCTCTTTCCGATTTTTGTTATATGTGAATAT
CGATCTTGACATGCAAGTCTGGAGTGAGCATCAATGGAGTGTACGAGACG
GTGACGCGCAAGATTTGCGCTATGTGTTTCAATCTTGTGTGCGAGGCAGC
GTGAAGCCTTGCTGTAGCGTGTATGCGAGCAAAACTCCGCAAGAATGTTT
TAAAAAGGAAAATGCTTGTCGTATAGACAACGTTCTGATTGCTTTATTTT
CGCTTTGCTATCAAATCATGAGCGATGTACAAGAAAAAGCATTGTACATA
CTTCTAAAAGCGTAGCCTTATAGATTCTTACGTCTAGTTGACGTGTGACA
GACTGCCCGTCTGTCTCCACACTACGCTCTCCGGATCCTTGATTAGTTCT
TACCAACTTTCCGGACTCCAAGGGGGCGAAGTGCAAGATGATGGGGGCAC
GCGTGTCAATCAGGGCCAGCAAGCCCCCCAAGGATGTGAAGGTTAAGACG
TACAACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTGGTGT
GCAGTTCCAGGAAGACCCTGTGATTTTCCCCTTGACGGCCGAGCTTACCG
TCCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTGA
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Coding sequence (CDS) from alignment at KK037249.1:617141..618334-

>rna8698 ID=rna8698|Name=rna8698|organism=Nannochloropsis gaditana|type=CDS|length=786bp|location=Sequence derived from alignment at KK037249.1:617141..618334- (Nannochloropsis gaditana)
TTCTTACCAACTTTCCGGACTCCAAGGGGGCGAAGTGCAAGATGATGGGG
GCACGCGTGTCAATCAGGGCCAGCAAGCCCCCCAAGGATGTGAAGGTTAA
GACGTACAACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTG
GTGTGCAGTTCCAGGAAGACCCTGTGATTTTCCCCTTGACGGCCGAGCTT
ACCGTCCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTGAAT
GTACGAGCTGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGTGT
GCGAGGCCGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACCCC
GTAAACATCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTTTTCTTAC
CAACTTTCCGGACTCCAAGGGGGCGAAGTGCAAGATGATGGGGGCACGCG
TGTCAATCAGGGCCAGCAAGCCCCCCAAGGATGTGAAGGTTAAGACGTAC
AACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTGGTGTGCA
GTTCCAGGAAGACCCTGTGATTTTCCCCTTGACGGCCGAGCTTACCGTCC
CAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTGAATGTACGAG
CTGGTGACGCTCAAGGTTTGGTCTCTTTGTTTTAATCTTGTGTGCGAGGC
CGATGACGAAGCCTTGCTGTACCGTGTACGCGTGCAAAACCCCGTAAACA
TCTTGTCGAAAGGAAAATGCTTTTGGTACACAATTT
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Synonyms
Publications