EWM22001.1, cds8669 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585102397|gb|EWM22001.1| (hypothetical protein Naga_100353g4 [Nannochloropsis gaditana]) HSP 1 Score: 270.781 bits (691), Expect = 5.306e-92 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query: 1 MYELVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTIFLTNFPDSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
MYELVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTIFLTNFPDSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC
Sbjct: 1 MYELVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTIFLTNFPDSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585102401|gb|EWM22005.1| (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana]) HSP 1 Score: 147.132 bits (370), Expect = 1.960e-41 Identity = 71/76 (93.42%), Postives = 72/76 (94.74%), Query Frame = 0
Query: 55 DSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+SKGAKCKMMGARVSIRASKPPK VKVKTYNSTGGYYSVSGSFRGVQ QEDPVI PLTAELTV GVGTLSQTLTDC
Sbjct: 156 NSKGAKCKMMGARVSIRASKPPKGVKVKTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDC 231
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|553178588|ref|XP_005852576.1| (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >gi|422295956|gb|EKU23255.1| hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.798 bits (325), Expect = 1.720e-35 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
Query: 56 SKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
SKGA+CKMMGARVSIRASKPPK V K++NSTGGY+SVSGSFR VQ QEDPV FPLTAELTVPGVGTLSQTLT C
Sbjct: 90 SKGARCKMMGARVSIRASKPPKGVG-KSHNSTGGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGC 163
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585102400|gb|EWM22004.1| (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana]) HSP 1 Score: 130.954 bits (328), Expect = 1.841e-35 Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0
Query: 55 DSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+SKGA+CKMMGARVSIRASKPPK V K++NSTGGYYSVSGSFR VQ QEDPV FPLTAELTVPGVGTLSQTLT C
Sbjct: 99 NSKGARCKMMGARVSIRASKPPKGVG-KSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGC 173
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585102398|gb|EWM22002.1| (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana]) HSP 1 Score: 130.183 bits (326), Expect = 1.803e-34 Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0
Query: 55 DSKGAKCKMMGARVSIRASKPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+SKGA+CKMMGARVSIRASKPPK V K++NSTGGYYSVSGSFR VQ QEDPV FPLTAELTVPGVGTLSQTLT C
Sbjct: 168 NSKGARCKMMGARVSIRASKPPKGVG-KSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGC 242 HSP 2 Score: 105.916 bits (263), Expect = 3.665e-25 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
Query: 1 MYELVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTI 48
MYE+VTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTI
Sbjct: 1 MYEMVTLKVWSLCFNLVCEADDEALLYRVRVQNPVNILSKGKCFWYTI 48
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585108538|gb|EWM26485.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 85.1149 bits (209), Expect = 1.197e-17 Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0
Query: 59 AKCKMMGARVSIRAS-----KPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
A CK+ GARVSI+ S K PK V K+YNSTGGYYSV+G+FRG+ F E+PV+ PLTA L + G LS TLT C
Sbjct: 97 ATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRING-SVLSDTLTSC 172
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585108537|gb|EWM26484.1| (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 85.5001 bits (210), Expect = 1.940e-17 Identity = 45/79 (56.96%), Postives = 55/79 (69.62%), Query Frame = 0
Query: 57 KGAKCKMMGARVSIRAS-----KPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+ A CK+ GARVSI+ S K PK V K+YNSTGGYYSV+G+FRG+ F E+PV+ PLTA L + G LS TLT C
Sbjct: 95 RRATCKIRGARVSIKTSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRING-SVLSDTLTSC 172
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585100200|gb|EWM20521.1| (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 82.8037 bits (203), Expect = 5.730e-17 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 0
Query: 57 KGAKCKMMGARVSIRAS-----KPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+ A CK+ GARVSI+ S K PK V K+YNSTGGYYSV+G+FRG+ F E+PV+ PLTA L V G LS TL C
Sbjct: 95 RRAACKIRGARVSIKRSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNG-SVLSDTLISC 172
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585100656|gb|EWM20775.1| (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 82.4185 bits (202), Expect = 5.829e-17 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
Query: 55 DSKGAKCKMMGARVSIRAS-----KPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+ + A CK+ GARVSI++S K PK V KTYNSTGGYY V+G+ RG+ F ED V+ PLTA+LTV G LS TLT C
Sbjct: 93 NGRRATCKIRGARVSIKSSRRPKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNG-DVLSDTLTSC 172
BLAST of EWM22001.1 vs. NCBI_GenBank
Match: gi|585109630|gb|EWM27399.1| (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 83.1889 bits (204), Expect = 7.128e-17 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = 0
Query: 57 KGAKCKMMGARVSIRAS-----KPPKDVKVKTYNSTGGYYSVSGSFRGVQFQEDPVIFPLTAELTVPGVGTLSQTLTDC 130
+ A CK+ GARVSI+ S K PK V K+YNSTGGYYSV+G+FRG+ F E+PV+ PLTA LTV LS TLT C
Sbjct: 95 RRAACKIRGARVSIKTSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTV-DESVLSDTLTLC 172 The following BLAST results are available for this feature:
BLAST of EWM22001.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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