|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100353g3.3232.mrna |
| Orig protein id | gnl|cribi|Naga_100353g3.3232 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:615344..617119 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8697 ID=rna8697|Name=rna8697|organism=Nannochloropsis gaditana|type=mRNA|length=252bp
ATGGACGTACAACTCGACGGGAGGATACTTCAGCGTGTCAGGCAGCTTCC
GGCGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCCTTGACGGCCGAG
CTTACCGTCCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGGTTGCTC
TGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGTCCCAGGGCCCATCA
TTCCCACGAATGCCCCCACAGCTGCGCCTATGCCTTACCATCTTCGCACT
AG back to topprotein sequence of rna8697 >rna8697-protein ID=rna8697-protein|Name=rna8697|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MLSDSFEHVCKARPLSETNLNVSTLSSPAPSLNPSLALACSGTSRTSNVP
HLILLFRRHRNFTKLTIMRRGLSLLALGLTLALTTGQMLSLKSIKTFERT
RMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGD
CMVRKNSKGAKCKMMGARVSIRASKPPKGVKVKTYNSTGGYYSVSGSFRG
VQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVRGAGTTRTTCVPGPIIP
TNAPTAAST back to topmRNA from alignment at KK037249.1:615344..617119- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8697 ID=rna8697|Name=rna8697|organism=Nannochloropsis gaditana|type=mRNA|length=1776bp|location=Sequence derived from alignment at KK037249.1:615344..617119- (Nannochloropsis gaditana)
ATGCTATCGGACAGCTTCGAGCACGTTTGTAAAGCTCGGCCGCTATCTGA
AACAAATCTTAATGTAAGTACACTCTCCTCACCAGCTCCCTCCCTTAATC
CGAGTGTTCGTACCGCAAACAAATACGATATTAATTAGACGTAGAGAAGA
GGGAACATGAAATAGTTTAGTTTTTAAAAGGTAGTTCCTACTTTCATGCA
CATATCGATGAAGAAATTGTGCAAGATATTGGAATGATCAGCTACTCTTA
TATCGTAAGGTTCACGTTCACTCTCGGCCCGCATTAGTACAAGTGAGAGG
CTAGACTGTACACAAAAGATGCTTTGAGATAGGTGTATGAAGATATAATG
GCACTTCAATGAATGTCGCATTGATTGGCTCGAAAACGTATCCTCATAAC
AATGTGTTACCTATCGAATGGCAGCTTTAAAACATCGATCAAGATACCTA
CTCGGACAATATTGATGTTTATTGATTGACATCACGCCTTCTCGCATGTC
TCCGCTCGTCTATCTTTTAAAGGCCTTTCACAGCACACTGATGTTTGCCT
CTTGCTGTCTTTTGCTTCTGCTCCCTGATTAAACGGCTTTTTAACTCCAT
CGCACTTGCAACGGCTGCTCAGCCGTTTCGTAAGCGACTAGGAAGACATT
CTTCCTTCTGACAGAGTTCCCCAACGTGTCTAGATGTCATATGCTATTGG
TTTATGACGGTGTGATCTAAGCAATATTCAAAAACTACGCTTGCCTCTCT
TATCGACGTTCTTGGCATTGAGACCCTAACAAGCCATCAGACAACTTAGA
GCATGTTCGTAATGGTCGGCCGACATTAGAAACAAATCTCTAGATTATGA
AAGGTGTGTTTCCGTTGTGAATTGCCATCCAGTTTAGAAGGCGCCGCCAG
CAAAGCTCTCTTCTCATGGACCTTCCATATTCTTTGTTAAGCATCATTTG
TATACAAGTTTCAAAATACGAGTCGCCGCTCAAATAGGAGCCAGCTTGTC
AAATAGATTCAAGCTTTATATTGACACGACATGCTGATAGCAACAAAGCT
CCATGAATCCATACGGCTTCTGGATATGTGACACACTGCCCGTATCTGGA
GCTTGCGCTTGCTTGCTCCGGTACAAGCCGCACAAGCAATGTTCCACATC
TAATACTGCTCTTTCGACGCCACAGGAACTTCACCAAGCTTACCATCATG
CGACGTGGTCTTTCTTTGCTCGCCTTGGGGCTTACCCTTGCGCTTACCAC
CGGACAAATGCTCTCCCTCAAGTCCATCAAGACGTTCGAAAGAACGCGGA
TGAATAAAGACAAGTGGAGCATGAAGGGCAACCTGGAGGATCCCACTCTT
GCTGTGGTGTCCGGCATTGGCACAAGTGGTCTGACTGTGACGCTGCTCGA
TACGGCGGATGACACCTTGGACACAGCGTCCTTCGCGGCGGGCGACTGCA
TGGTGCGGAAGAACTCCAAGGGGGCGAAGTGCAAGATGATGGGGGCACGC
GTGTCAATCAGGGCCAGCAAGCCCCCCAAGGGTGTGAAGGTTAAGACGTA
CAACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTGGTGTGC
AACTCCAGGAAGACCCTGTGATTTCCCCCTTGACGGCCGAGCTTACCGTC
CAAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTCTGTCAGGGG
GGCTGGGACAACGAGGACCACATGCGTCCCAGGGCCCATCATTCCCACGA
ATGCCCCCACAGCTGCGTCCACGTAG back to topCoding sequence (CDS) from alignment at KK037249.1:615344..617119- >rna8697 ID=rna8697|Name=rna8697|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at KK037249.1:615344..617119- (Nannochloropsis gaditana)
CTTGCGCTTGCTTGCTCCGGTACAAGCCGCACAAGCAATGTTCCACATCT
AATACTGCTCTTTCGACGCCACAGGAACTTCACCAAGCTTACCATCATGC
GACGTGGTCTTTCTTTGCTCGCCTTGGGGCTTACCCTTGCGCTTACCACC
GGACAAATGCTCTCCCTCAAGTCCATCAAGACGTTCGAAAGAACGCGGAT
GAATAAAGACAAGTGGAGCATGAAGGGCAACCTGGAGGATCCCACTCTTG
CTGTGGTGTCCGGCATTGGCACAAGTGGTCTGACTGTGACGCTGCTCGAT
ACGGCGGATGACACCTTGGACACAGCGTCCTTCGCGGCGGGCGACTGCAT
GGTGCGGAAGAACTCCAAGGGGGCGAAGTGCAAGATGATGGGGGCACGCG
TGTCAATCAGGGCCAGCAAGCCCCCCAAGGGTGTGAAGGTTAAGACGTAC
AACTCGACGGGAGGATACTACAGCGTGTCAGGCAGCTTCCGTGGTGTGCA
ACTCCAGGAAGACCCTGTGATTTCCCCCTTGACGGCCGAGCTTACCGTCC
AAGGCGTCGGCACTCTCTCCCAGACATTGACCGATTGCTCTGTCAGGGGG
GCTGGGACAACGAGGACCACATGCGTCCCAGGGCCCATCATTCCCACGAA
TGCCCCCACAGCTGCGTCCACGTAGATGCTATCGGACAGCTTCGAGCACG
TTTGTAAAGCTCGGCCGCTATCTGAAACAAATCTTAATGTAAGTACACTC
TCCTCACCAGCTCCCTCCCTTAATCCGAGTCTTGCGCTTGCTTGCTCCGG
TACAAGCCGCACAAGCAATGTTCCACATCTAATACTGCTCTTTCGACGCC
ACAGGAACTTCACCAAGCTTACCATCATGCGACGTGGTCTTTCTTTGCTC
GCCTTGGGGCTTACCCTTGCGCTTACCACCGGACAAATGCTCTCCCTCAA
GTCCATCAAGACGTTCGAAAGAACGCGGATGAATAAAGACAAGTGGAGCA
TGAAGGGCAACCTGGAGGATCCCACTCTTGCTGTGGTGTCCGGCATTGGC
ACAAGTGGTCTGACTGTGACGCTGCTCGATACGGCGGATGACACCTTGGA
CACAGCGTCCTTCGCGGCGGGCGACTGCATGGTGCGGAAGAACTCCAAGG
GGGCGAAGTGCAAGATGATGGGGGCACGCGTGTCAATCAGGGCCAGCAAG
CCCCCCAAGGGTGTGAAGGTTAAGACGTACAACTCGACGGGAGGATACTA
CAGCGTGTCAGGCAGCTTCCGTGGTGTGCAACTCCAGGAAGACCCTGTGA
TTTCCCCCTTGACGGCCGAGCTTACCGTCCAAGGCGTCGGCACTCTCTCC
CAGACATTGACCGATTGCTCTGTCAGGGGGGCTGGGACAACGAGGACCAC
ATGCGTCCCAGGGCCCATCATTCCCACGAATGCCCCCACAGCTGCGTCCA
CGTAGATGCTATCGGACAGCTTCGAGCACGTTTGTAAAGCTCGGCCGCTA
TCTGAAACAAATCTTAATGTAAGTACACTCTCCTCACCAGCTCCCTCCCT
TAATCCGAGT back to top
|