rna8696, rna8696 (mRNA) Nannochloropsis gaditana

Overview
Namerna8696
Unique Namerna8696
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length957
Alignment locationKK037249.1:612786..613146 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100353g2.3233.mrna
Orig protein idgnl|cribi|Naga_100353g2.3233
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:612786..613146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100353g2gene8429Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8696rna8696-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22006.1cds8667Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8696 ID=rna8696|Name=rna8696|organism=Nannochloropsis gaditana|type=mRNA|length=957bp
CTTCCTTCCCTTCCCGGGGTCCAGATGAAGAGGAAGCAGGCGGGTCTGGC
CGGGGGGCACCAGGGCGCGGTGACGCACCAGGCGCTGGGGGAGGAAGGGG
AGGAGGAAGGGGCGCACGGTCACGGACACGGGCACGGCGGCCATGAAGAC
CATGGCGGCGTTGGCGAGATCGTGATCCACCAAATGATCGAGACGATCGA
GTTCGTTCTGGGCATGGTCTCCAACACCGCGTCGTACCTCCGGCTGTGGG
CGCTTTCCCTCGCGCACTCTCAGCTGGCGGAGGTGTTCTTTGAGAAAACC
TTGAAGGGTCAGATGGAATCTGGATCGGTCATCGGCGTCTTCATTGGCTT
TGCAATTTTTGGCGGTAGGGAGAAATTGGGAGCAAAGGACTCTATGGGTT
CTCAATTTCTTTACTCATCGTGCCTCTGTCCACCCTCGATTCCCTTCTCG
CCCTCAGCCGTGACCTTCGGCGTCATCCTCTCCATGGACGTGGTCGAATG
TTTCCTGCACGCGCTTCGCCTCCACTGGGTCGAGTTCCAGAACAAATTCT
ACAAGGCGGATGGCTACAAATTCGCCCCTCTCTCCATTCCAGCACTCTGC
AAAAAAGTGGTGCTCACGTAGAGCTATGTAAAAGTCTTCCATTCGCGAGC
GGAGCAGCCTGCTTCTCAGTCCGGATGGAAGGAAATGGGGTTGAGAGTGA
TTCGTGCGTGGTTAGGGTATAGAGATATTCAAGGGAGACAGTTTGTGAGG
GTCCATCGATGTGTGTTCACGGCGCGCTCCTAAGCTCTCCTCGGAATAGC
CTCTTTCGGGGTGGAGAGGACGGAGCTAGAAATCGGACATGACGGTGGAT
TCTTCCGCGTCGACGGATAAGGGAAAGAAGACCAGACCATCCTCGTTTGG
AAGAAGTCAGAAAAGAATATCTGGGACCGACAAGAGCACCGCCAGCGGCA
CATAATA
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protein sequence of rna8696

>rna8696-protein ID=rna8696-protein|Name=rna8696|organism=Nannochloropsis gaditana|type=polypeptide|length=83bp
MDVQLDGRILQRVRQLPACAAPGRSRRFPLDGRAYRPRRRHSLPDIDRLL
CQGDQDKEGHMRPRAHHSHECPHSCAYALPSSH
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mRNA from alignment at KK037249.1:612786..613146-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8696 ID=rna8696|Name=rna8696|organism=Nannochloropsis gaditana|type=mRNA|length=361bp|location=Sequence derived from alignment at KK037249.1:612786..613146- (Nannochloropsis gaditana)
ATGGGTGATTGCAAAGTGTGGAGGAACTATAGGGGGCCCCGGTGCAAGAG
TGGTGGAGCACGCATTTCAATCAAGAGTAGCAAGCGCCCTAGCGGCATTG
ATTGATTGACAAGACGTACAACTCGACGGGAGGATACTTCAGCGTGTCAG
GCAGCTTCCGGCGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCCTTG
ACGGCCGAGCTTACCGTCCCAGGCGTCGGCACTCTCTCCCAGACATTGAC
CGGTTGCTCTGTCAAGGGGACCAAGACAAGGAAGGTCACATGCGTCCCAG
GGCCCATCATTCCCACGAATGCCCCCACAGCTGCGCCTATGCCTTACCAT
CTTCGCACTAG
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Coding sequence (CDS) from alignment at KK037249.1:612786..613146-

>rna8696 ID=rna8696|Name=rna8696|organism=Nannochloropsis gaditana|type=CDS|length=504bp|location=Sequence derived from alignment at KK037249.1:612786..613146- (Nannochloropsis gaditana)
ACGTACAACTCGACGGGAGGATACTTCAGCGTGTCAGGCAGCTTCCGGCG
TGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCCTTGACGGCCGAGCTTA
CCGTCCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGGTTGCTCTGTC
AAGGGGACCAAGACAAGGAAGGTCACATGCGTCCCAGGGCCCATCATTCC
CACGAATGCCCCCACAGCTGCGCCTATGCCTTACCATCTTCGCACTAGAT
GGACGTACAACTCGACGGGAGGATACTTCAGCGTGTCAGGCAGCTTCCGG
CGTGTGCAGCTCCAGGAAGATCCCGTCGATTTCCCCTTGACGGCCGAGCT
TACCGTCCCAGGCGTCGGCACTCTCTCCCAGACATTGACCGGTTGCTCTG
TCAAGGGGACCAAGACAAGGAAGGTCACATGCGTCCCAGGGCCCATCATT
CCCACGAATGCCCCCACAGCTGCGCCTATGCCTTACCATCTTCGCACTAG
ATGG
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Synonyms
Publications