EWM22006.1, cds8667 (CDS) Nannochloropsis gaditana

Overview
NameEWM22006.1
Unique Namecds8667
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:613143..613146 -
Alignment locationKK037249.1:612786..613033 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22006.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100353g2.3233.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:613143..613146 -
KK037249.1supercontigKK037249.1:612786..613033 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22006.1 vs. NCBI_GenBank
Match: gi|585102402|gb|EWM22006.1| (hypothetical protein Naga_100353g2 [Nannochloropsis gaditana])

HSP 1 Score: 166.777 bits (421), Expect = 2.385e-52
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MDVQLDGRILQRVRQLPACAAPGRSRRFPLDGRAYRPRRRHSLPDIDRLLCQGDQDKEGHMRPRAHHSHECPHSCAYALPSSH 83
            MDVQLDGRILQRVRQLPACAAPGRSRRFPLDGRAYRPRRRHSLPDIDRLLCQGDQDKEGHMRPRAHHSHECPHSCAYALPSSH
Sbjct:    1 MDVQLDGRILQRVRQLPACAAPGRSRRFPLDGRAYRPRRRHSLPDIDRLLCQGDQDKEGHMRPRAHHSHECPHSCAYALPSSH 83
The following BLAST results are available for this feature:
BLAST of EWM22006.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102402|gb|EWM22006.1|2.385e-52100.00hypothetical protein Naga_100353g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8696rna8696Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications