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Properties
| Property Name | Value |
|---|
| Product | selenoprotein o |
| Orig transcript id | gnl|cribi|Naga_100361g6.4771.mrna |
| Orig protein id | gnl|cribi|Naga_100361g6.4771 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:592717..594559 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8687 ID=rna8687|Name=rna8687|organism=Nannochloropsis gaditana|type=mRNA|length=1467bp
GGGGGGATAAAACATGTCGGGGAGATCCCTCGTGCCGGCAGAAACATGAG
GCACTCAAGGAAAAGGAGATACTGGGACATGGTAGGGGGAAAGGGTGCCG
TTCTCGGGTTTGACGTTGTTGGCAAAGGCAGATTGAGTTGACTCTCCTGC
AGCGGGAGGCTTCAAGAATAATGCTTGCGACGACTGCGAGAAAGCATGCG
CAGGCCCCGGGCAGGACCAGGGAGAGCTGTGAAAATGCAAAAGATGTGAG
CAGTGTTCAGTAAAAGAGAGTCTTTGGCCGTTGCTATTTATCAACGTTCA
AAAGGGGCTCGCAGGCCTCGGGTTGTGAGAGTCGCCTCGCGCTATCCCTC
CCGCTGCTTCTTGTTCGTGATACAACATATCACAGACCTTGCGGCCATCT
TCGCTGATGCCACCGACTCCGTCTTCCCGCCGAGAAGAGTGTCCCAAAAT
CATGCGGGCACGGATTCTGCACTCGTGCCATGCCAAAATGACTTGGGGAA
ACGCAAAGGACTCGGGCAGCAAGGAAAGCATGGACAAGCTGGATGTGTCG
TTGGATGAATTGGTCAAGGAAGGCAGCAAGGGCCGGGGGGCTCCGAGACG
TGGGTCTGCAGGCAAGGGCCTCGGACGAAGCGCAACGCGTGGGCTCCCCC
CCAAAACGAACGGGGGAAAAGGGCTGCCGGGACCGATACGCACGCAGCAC
AAAGGCACGCCCTCAATGCGGTACAACCCCTTGAGCCGAAATGCGGCGCC
TTCTTCCTTCCAACCCGCCGCGGCCCCTGTCTCGGTCCCCGCCAAGCAGG
TGGTGTCACTGAACAGGGAAATGCTCAGTCAGAACCACGCCGGCGTCCTA
GGCCGCAGTAACGGCGGGCAGGTGAAGGTGGGAGGAGGGGGACGGGGCCT
CTTGGATCGGCTGGGGCCCAAGGCGGGCCAGCAGAGGGCGGGCACCAAGA
TCGAGATCAGCAACCTCCTCCCCGACGTGACGGAGAGCGAGGAGCTTCGG
GAGCTCTTTGCCACCGTGGGGGAGGTTCTGTACGCCGAGATCAAGTTCGG
GCGGGACGGACGGTCGACAGGCCAAGCAGAGGTCTACTTCACCAAGTTCT
CGGAGGCGCTCAAGGCGGTGGAGAAGTTCCACACGCGGACATTGGACGGT
GTCCCCATGCACGTGAAGATGGCGCCCAGGGAGGGGGGCAGGGAGGGGGG
GAGGGAGGGAGGGGGGGAGGGGGGCAAGGGGGGGGGCAGGGAGGGGGACA
GGGGGGGGGGAAGGGAGGGAGGGAAGGGCGTGGGAATGGCGCGGGAAAGG
AGCGAAGAGAGGCAGGCAGGAGGGAATGTGAAGATGGGGCTCTTCGGATC
GGCTCTGGAGGAGGAGGGGGGGGGGGATGGAAGGGGGAGCCGACGTTCTC
GGTAATTATCAGCGATGATGCGGATGGACGAGGTGGTGACGGTGGTGGGG
TTGGGAGAAGGGGAGGA back to topprotein sequence of rna8687 >rna8687-protein ID=rna8687-protein|Name=rna8687|organism=Nannochloropsis gaditana|type=polypeptide|length=275bp
MHLHTAFPFTSRVSCMPGTTGRAPGTLLSSFQTFLLTAALLLARPQPAAS
RSSRRLPKTAPLQTLALARPFLSVASRIGAHRPSVTSFARWSAAFQYFSA
HSVFPTMRSEAVRAASDSARQAPGHSIPAASRPQPKTYTLETLPFDNLAL
RSLPLDPQPENFIRPVPNSVYSRVEPEPLKNPVLVALSPDALTDLLSLDP
SELKREEDLAAYLGGNKRLPGSETYAHCYAGHQFGAFSGQLGDGAAISLG
EVVGERGERCEIQLKGAGPTPYSRR back to topmRNA from alignment at KK037249.1:592717..594559+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8687 ID=rna8687|Name=rna8687|organism=Nannochloropsis gaditana|type=mRNA|length=1843bp|location=Sequence derived from alignment at KK037249.1:592717..594559+ (Nannochloropsis gaditana)
CAAGCCCTCCAAAAATAATGTCAAGGGCTAGTAGGCATGCAAAGGAAATA
CTTCGACTCCTCTGAGTGCCCGGTGCATTGCGCATTATGTGGTGCGTGTT
TGAGCTGTCGTACGTGATATCACCtgacctcctctctccttaccACATAT
ATATTCCACTTTTCGTCCATGCACCTTCACACAGCGTTCCCATTTACCTC
CAGAGTCTCGTGCATGCCTGGCACCACTGGCAGGGCACCGGGCACATTGC
TTTCGTCCTTTCAAACCTTTCTTCTGACcgcagccctccttctcgcccgt
cctCAACCTGCGGCGTCCCGCTCCTCGCGTCGGCTGCCCAAGACGGCGCC
CTTACAGACCCTGGCGCTCGcacgccctttcctctcagTTGCATCTCGCA
TCGGAGCCCACCGCCCGAGCGTGACATCATTTGCCCGGTGGTCCGCCGCC
TTTCAATACTTCTCGGCTCACTCGGTCTTCCCCACAATGAGGAGTGAAGC
TGTCCGTGCCGCCAGCGACAGTGCACGCCAGGCGCCCGGGCATTCCATCC
CTGCAGCATCCAGACCGCAGCCCAAGACCTACACCCTGGagaccctccct
ttcgacAATTTGGCACTGCGCTCCCTACCCCTCGATCCGCAGCCCGAGAA
TTTTATACGGCCGGTGCCCAACAGTGTGTACTCGCGCGTGGAGCCGGAGG
TAAGGACCGCGGGACAGGTATCATGCTTACCCGCCTCTTTCGAGGCGCAT
TCCGAACCttgttttcttccctctctttcccctcaaccctccctccagcc
cctgaAGAACCCGGTGCTCGTGGCGCTCTCCCCCGACGCCCTTaccgacc
tcctctccctcgacccctcGGAActgaagcgggaggaggacctcgCGGCC
TATTTGGGGGGCAACAAGCGCCTGCCAGGCAGCGAAACCTACGCACATTG
CTACGCTGGGCACCAATTTGGCGCTTTTTCCGGCCAGCTCGGGGACGGAG
CGGCTATCTCTCTCGGTAAGCCTCTCTCGGTGTTTCTCGggcatttcccc
ccttcagGACGGGAGAGAGACCTTACGCCTGCACCCGAGCTTCTCAACCC
TGTGTACCCCGGTGCTGACAGGcgaggtggtgggcgagaggggggaacgT
TGCGAGATCCAACTCAAAGGGGCGGGGCCCACGCCCTACTCGCGACggtg
agagggtggggaaccctggcgggggggggaggaagggcggggattTGGAA
GGGCTGCCTGGTAGTCGCACGGCTCGCTCTTGACTTCTCTCCGCtgatcc
cctcctcccctccctccctctttcccggcAGGGCGGATGGACGCAAGGTC
CTTCGCTCCTCCATCCGGGAATTCCTGTGCTCGGAGGCCATGAGCTTCCT
CGGGGTCCCCACCACGCGGGCTGGTGCCCTCATCACCAGCGACACGCTCA
CCCAGCgaggtccctccctccctccctccctccctccctcccgcccgccc
gcccgcctttcctcctttccgtcgccccccttggcccctcggtgcttcct
tcttccctcctctttacCTGACCGATcctcactttctttttccctctttt
cccccctcttcccctccttcccctcctctttccctccctccctccctccc
tccagacaTCTTCTACAACGGAAACGTGATCAATGAGCGATGCTCCGTGG
TGACGCGCCTCgcgccttctttcctgcgCTTTGGCTCCTTCGAAGTGGTC
AAAACCCAGGACGCCTAcacggggcgggcggggccgtCGCCGGGGAACAC
AGAGCTGCtgaggtgagggaggaagggagggagggagggaggg back to topCoding sequence (CDS) from alignment at KK037249.1:592717..594559+ >rna8687 ID=rna8687|Name=rna8687|organism=Nannochloropsis gaditana|type=CDS|length=2484bp|location=Sequence derived from alignment at KK037249.1:592717..594559+ (Nannochloropsis gaditana)
ATGCACCTTCACACAGCGTTCCCATTTACCTCCAGAGTCTCGTGCATGCC
TGGCACCACTGGCAGGGCACCGGGCACATTGCTTTCGTCCTTTCAAACCT
TTCTTCTGACcgcagccctccttctcgcccgtcctCAACCTGCGGCGTCC
CGCTCCTCGCGTCGGCTGCCCAAGACGGCGCCCTTACAGACCCTGGCGCT
CGcacgccctttcctctcagTTGCATCTCGCATCGGAGCCCACCGCCCGA
GCGTGACATCATTTGCCCGGTGGTCCGCCGCCTTTCAATACTTCTCGGCT
CACTCGGTCTTCCCCACAATGAGGAGTGAAGCTGTCCGTGCCGCCAGCGA
CAGTGCACGCCAGGCGCCCGGGCATTCCATCCCTGCAGCATCCAGACCGC
AGCCCAAGACCTACACCCTGGagaccctccctttcgacAATTTGGCACTG
CGCTCCCTACCCCTCGATCCGCAGCCCGAGAATTTTATACGGCCGGTGCC
CAACAGTGTGTACTCGCGCGTGGAGCCGGAGcccctgaAGAACCCGGTGC
TCGTGGCGCTCTCCCCCGACGCCCTTaccgacctcctctccctcgacccc
tcGGAActgaagcgggaggaggacctcgCGGCCTATTTGGGGGGCAACAA
GCGCCTGCCAGGCAGCGAAACCTACGCACATTGCTACGCTGGGCACCAAT
TTGGCGCTTTTTCCGGCCAGCTCGGGGACGGAGCGGCTATCTCTCTCGGc
gaggtggtgggcgagaggggggaacgTTGCGAGATCCAACTCAAAGGGGC
GGGGCCCACGCCCTACTCGCGACggtgaATGCACCTTCACACAGCGTTCC
CATTTACCTCCAGAGTCTCGTGCATGCCTGGCACCACTGGCAGGGCACCG
GGCACATTGCTTTCGTCCTTTCAAACCTTTCTTCTGACcgcagccctcct
tctcgcccgtcctCAACCTGCGGCGTCCCGCTCCTCGCGTCGGCTGCCCA
AGACGGCGCCCTTACAGACCCTGGCGCTCGcacgccctttcctctcagTT
GCATCTCGCATCGGAGCCCACCGCCCGAGCGTGACATCATTTGCCCGGTG
GTCCGCCGCCTTTCAATACTTCTCGGCTCACTCGGTCTTCCCCACAATGA
GGAGTGAAGCTGTCCGTGCCGCCAGCGACAGTGCACGCCAGGCGCCCGGG
CATTCCATCCCTGCAGCATCCAGACCGCAGCCCAAGACCTACACCCTGGa
gaccctccctttcgacAATTTGGCACTGCGCTCCCTACCCCTCGATCCGC
AGCCCGAGAATTTTATACGGCCGGTGCCCAACAGTGTGTACTCGCGCGTG
GAGCCGGAGcccctgaAGAACCCGGTGCTCGTGGCGCTCTCCCCCGACGC
CCTTaccgacctcctctccctcgacccctcGGAActgaagcgggaggagg
acctcgCGGCCTATTTGGGGGGCAACAAGCGCCTGCCAGGCAGCGAAACC
TACGCACATTGCTACGCTGGGCACCAATTTGGCGCTTTTTCCGGCCAGCT
CGGGGACGGAGCGGCTATCTCTCTCGGcgaggtggtgggcgagagggggg
aacgTTGCGAGATCCAACTCAAAGGGGCGGGGCCCACGCCCTACTCGCGA
CggtgaATGCACCTTCACACAGCGTTCCCATTTACCTCCAGAGTCTCGTG
CATGCCTGGCACCACTGGCAGGGCACCGGGCACATTGCTTTCGTCCTTTC
AAACCTTTCTTCTGACcgcagccctccttctcgcccgtcctCAACCTGCG
GCGTCCCGCTCCTCGCGTCGGCTGCCCAAGACGGCGCCCTTACAGACCCT
GGCGCTCGcacgccctttcctctcagTTGCATCTCGCATCGGAGCCCACC
GCCCGAGCGTGACATCATTTGCCCGGTGGTCCGCCGCCTTTCAATACTTC
TCGGCTCACTCGGTCTTCCCCACAATGAGGAGTGAAGCTGTCCGTGCCGC
CAGCGACAGTGCACGCCAGGCGCCCGGGCATTCCATCCCTGCAGCATCCA
GACCGCAGCCCAAGACCTACACCCTGGagaccctccctttcgacAATTTG
GCACTGCGCTCCCTACCCCTCGATCCGCAGCCCGAGAATTTTATACGGCC
GGTGCCCAACAGTGTGTACTCGCGCGTGGAGCCGGAGcccctgaAGAACC
CGGTGCTCGTGGCGCTCTCCCCCGACGCCCTTaccgacctcctctccctc
gacccctcGGAActgaagcgggaggaggacctcgCGGCCTATTTGGGGGG
CAACAAGCGCCTGCCAGGCAGCGAAACCTACGCACATTGCTACGCTGGGC
ACCAATTTGGCGCTTTTTCCGGCCAGCTCGGGGACGGAGCGGCTATCTCT
CTCGGcgaggtggtgggcgagaggggggaacgTTGCGAGATCCAACTCAA
AGGGGCGGGGCCCACGCCCTACTCGCGACggtga back to top
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