rna8663, rna8663 (mRNA) Nannochloropsis gaditana

Overview
Namerna8663
Unique Namerna8663
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length888
Alignment locationKK037249.1:532785..534589 -

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Properties
Property NameValue
Productchaperone -domain containing protein
Orig transcript idgnl|cribi|Naga_100052g27.1186.mrna
Orig protein idgnl|cribi|Naga_100052g27.1186
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:532785..534589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100052g27gene8396Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22061.1cds8636Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8663rna8663-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8663 ID=rna8663|Name=rna8663|organism=Nannochloropsis gaditana|type=mRNA|length=888bp
ATGTCATTTACATTCGGCTTCGACTTACCTTCGAACCCATCAACGACATC
AAACACTGTGGCCCAACTCGGAGCGTCTCCGTCCTCTCATACGACCTGGG
GACATGCCACTTCAACACCACGCGTAATCCACCTCGATGAGTTGACCACA
GCTCCTGCATTTTGCTCGATAAGTGTACTTACTCGCACGTATGACGATCC
CAAGGGACATTTTCGTGTGGTTAAAAATGTGGAGGGAGTGATTGCCGACT
TGCCAGAGGGAAGTGATCTCGTTCCCGGCGTGTATGAGGGAGGCTTGAAG
ATCTGGGAATCCAGCAAGGATTTAGTCTGTTACCTCCAGAACCAAAGAAT
AATTCGACCTCTTTATCGTGTGCTGGAGCTGGGATGCGGCCACGGGCTTC
CAGGTATTCACGCTTTACAACAAGGGGCTGATAGTGTAGTTTTCTCCGAT
TTGAATGAGGAGGTCCTCCGGGAGGTTACACGACCTAACATATTTCTGAA
TGTAGCTAATAGAGCACTATCCTCTGCAAGGATAAGCTTGATCTGTGGCG
ACTGGGAGGCATTGCCCCAAATTCTTGGTGTAGACAAGCCGGTAGACTTT
AACGTCATTGTTAGCGCAGAGACATTTTACACGCCTGCTGTTACAAACAA
ACTTTTGCGTTGCATTCATCGCTACTTAGCCACAACACCGGAGGCATTGG
CATTGGTGGCTGGTAAGCGGTACTACTTTGGCACAGGCGGATCTGTGGCC
AATTTGATGTCGCAAGCCAGTGCTCTTGGCATGCGGAGTCGTGTGGTGGC
CTCGTCTGAAGACGGGAGAAGCAACATCCGAGATATCGTGGAGATAAGAT
GTAAGATGGAAGGACTTGTAAGGGGAAAAAAAATATAA
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protein sequence of rna8663

>rna8663-protein ID=rna8663-protein|Name=rna8663|organism=Nannochloropsis gaditana|type=polypeptide|length=530bp
MGAIDGDYRIRHSRRGWAVVCLACILSQFAISLANTGEAAPQSTPASENV
DTTIYTYDAAPPYSRDSRKNSEHGAQIDVRPEHDTGGEISLMRQGNYQNL
TSDNEKGSDKLVNELSSGLEKATGDGVLGYEQRDIEGIIRSEDEEEEEKI
GSVMYNAAEEDSMAEIRGLIEAQAEEERRLAEEAAFDEARAHAAEREAVR
QEAEEKVRTRRQARDDNLFEAFKEQQWAEPMARSRSGSSAADPGIDGGSG
HRDGVSALAGRTSHRPRGHVLGLGQGTSNRGTTSRFSSFHAQRGRVPPTS
DEAQAEMMSAAFGSVRGKASFEEMNSQHQGGTVDRTGEENGTARAHLAAK
LVLETDALLYGGHGGPVGATLLEVEGGDEDWENGEGAGSAGMKNVLVKDR
TSKEIQRILREGEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKT
SHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQRLRPLVDK
VDEFSDYYEPILERKGQIAAAAFLLWALVL
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mRNA from alignment at KK037249.1:532785..534589-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8663 ID=rna8663|Name=rna8663|organism=Nannochloropsis gaditana|type=mRNA|length=1805bp|location=Sequence derived from alignment at KK037249.1:532785..534589- (Nannochloropsis gaditana)
GACACTCATCTTCATATGGGCAGGAAGCTTATAACGTGCCTTTCCTACAC
GATACAACAGGCTCTAAGACTACCTCTGGTAGCGCTTTGAAAAGTGACCA
TTCCCAGTACTCAAGAAACGTTTTTGATGGGTGCAATCGATGGCGATTAT
AGAATAAGACACTCGCGGCGAGGCTGGGCTGTCGTCTGCCTTGCATGTAT
ATTATCCCAATTTGCAATTAGTTTAGCAAACACCGGAGAGGCAGCTCCCC
AATCAACACCAGCATCTGAAAATGTAGATACTACCATATACACATATGAT
GCAGCGCCACCATACTCGCGGGATAGCCGGAAAAACTCTGAGCATGGTGC
TCAAATAGATGTGAGGCCCGAGCACGATACTGGGGGTGAGATCAGCCTTA
TGCGCCAGGGAAACTACCAGAATTTGACATCTGACAATGAGAAAGGATCT
GATAAATTGGTCAATGAATTGTCAAGTGGGCTCGAGAAAGCCACTGGGGA
TGGCGTCTTGGGGTACGAGCAGCGAGATATCGAGGGGATCATAAGAAGCG
AGGACGAGGAGGAGGAGGAGAAAATTGGCAGCGTTATGTATAATGCTGCA
GAAGAGGACTCCATGGCAGAGATAAGGGGGTTAATTGAAGCCCAGGCTGA
GGAGGAACGGCGCCTAGCCGAGGAAGCGGCGTTCGACGAGGCACGAGCAC
ATGCAGCAGAGCGGGAGGCCGTGCGGCAAGAAGCAGAGGAGAAAGTACGG
ACTCGAAGACAAGCACGCGATGACAATCTCTTCGAGGCATTTAAGGAACA
ACAGTGGGCGGAGCCGATGGCGAGAAGCCGTAGCGGCAGCTCCGCGGCTG
ACCCGGGCATTGATGGCGGGAGCGGGCACCGTGATGGAGTGTCCGCCCTG
GCGGGACGCACCTCGCACAGGCCGCGCGGGCATGTGCTCGGGCTTGGCCA
AGGGACAAGTAATAGAGGCACGACGTCTCGATTCTCCTCCTTCCATGCGC
AGCGAGGCCGCGTGCCCCCCACCAGTGACGAAGCTCAAGCCGAGATGATG
AGCGCCGCGTTCGGTAGCGTGCGCGGCAAAGCGTCCTTCGAGGAGATGAA
TTCACAGCACCAAGGGGGTACAGTCGATCGTACTGGGGAAGAGAATGGCA
CCGCGCGCGCTCATCTGGCTGCCAAACTGGTTCTGGAGACAGACGCCCTC
CTCTACGGCGGCCATGGTGGTCCCGTTGGCGCTACCCTGTTGGAGGTAGA
GGGTGGCGATGAGGACTGGGAGAACGGAGAGGGAGCTGGAAGTGCAGGGA
TGAAGAATGTACTAGTAAAAGACCGTACAAGCAAAGAAATTCAGCGTATC
CTGCGGGAAGGGGAGAGAGAAGAACCGAATTGGTACGTGGTACTAGGCAT
CTCTCGACGCGCGCAGGCGCAGGCCGTGAAGGACAGCTTTCGGAGGTTGG
TTCTTCTTATTCATCCGGACAAAACTAGTCACCTTGGTGCGCAAGAAGCG
TTCCAGCTGGTGCAGGAGGCGTACGAGAGCCTCTCTAGTCCAATCGAGCG
GCTTGCGTACGATCAATACCTGGTCAAGCTACGGGCCAAACGCTGGAAGC
AGCGCCTCCGCCCGCTGGTCGACAAAGTCGATGAATTTTCCGACTACTAC
GAACCGATTTTAGAACGCAAAGGTCAGATCGCCGCCGCCGCCTTTCTACT
GTGGGCCTTGGTTCTGTGAGGATCGCCAAAGTAAAATTTGACAAATGGCA
TGAACGATAAAGATGCCCAGTGCCGCCCTTGTGTGGGCAAATAGTAGGAA
GTACA
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Coding sequence (CDS) from alignment at KK037249.1:532785..534589-

>rna8663 ID=rna8663|Name=rna8663|organism=Nannochloropsis gaditana|type=CDS|length=1593bp|location=Sequence derived from alignment at KK037249.1:532785..534589- (Nannochloropsis gaditana)
ATGGGTGCAATCGATGGCGATTATAGAATAAGACACTCGCGGCGAGGCTG
GGCTGTCGTCTGCCTTGCATGTATATTATCCCAATTTGCAATTAGTTTAG
CAAACACCGGAGAGGCAGCTCCCCAATCAACACCAGCATCTGAAAATGTA
GATACTACCATATACACATATGATGCAGCGCCACCATACTCGCGGGATAG
CCGGAAAAACTCTGAGCATGGTGCTCAAATAGATGTGAGGCCCGAGCACG
ATACTGGGGGTGAGATCAGCCTTATGCGCCAGGGAAACTACCAGAATTTG
ACATCTGACAATGAGAAAGGATCTGATAAATTGGTCAATGAATTGTCAAG
TGGGCTCGAGAAAGCCACTGGGGATGGCGTCTTGGGGTACGAGCAGCGAG
ATATCGAGGGGATCATAAGAAGCGAGGACGAGGAGGAGGAGGAGAAAATT
GGCAGCGTTATGTATAATGCTGCAGAAGAGGACTCCATGGCAGAGATAAG
GGGGTTAATTGAAGCCCAGGCTGAGGAGGAACGGCGCCTAGCCGAGGAAG
CGGCGTTCGACGAGGCACGAGCACATGCAGCAGAGCGGGAGGCCGTGCGG
CAAGAAGCAGAGGAGAAAGTACGGACTCGAAGACAAGCACGCGATGACAA
TCTCTTCGAGGCATTTAAGGAACAACAGTGGGCGGAGCCGATGGCGAGAA
GCCGTAGCGGCAGCTCCGCGGCTGACCCGGGCATTGATGGCGGGAGCGGG
CACCGTGATGGAGTGTCCGCCCTGGCGGGACGCACCTCGCACAGGCCGCG
CGGGCATGTGCTCGGGCTTGGCCAAGGGACAAGTAATAGAGGCACGACGT
CTCGATTCTCCTCCTTCCATGCGCAGCGAGGCCGCGTGCCCCCCACCAGT
GACGAAGCTCAAGCCGAGATGATGAGCGCCGCGTTCGGTAGCGTGCGCGG
CAAAGCGTCCTTCGAGGAGATGAATTCACAGCACCAAGGGGGTACAGTCG
ATCGTACTGGGGAAGAGAATGGCACCGCGCGCGCTCATCTGGCTGCCAAA
CTGGTTCTGGAGACAGACGCCCTCCTCTACGGCGGCCATGGTGGTCCCGT
TGGCGCTACCCTGTTGGAGGTAGAGGGTGGCGATGAGGACTGGGAGAACG
GAGAGGGAGCTGGAAGTGCAGGGATGAAGAATGTACTAGTAAAAGACCGT
ACAAGCAAAGAAATTCAGCGTATCCTGCGGGAAGGGGAGAGAGAAGAACC
GAATTGGTACGTGGTACTAGGCATCTCTCGACGCGCGCAGGCGCAGGCCG
TGAAGGACAGCTTTCGGAGGTTGGTTCTTCTTATTCATCCGGACAAAACT
AGTCACCTTGGTGCGCAAGAAGCGTTCCAGCTGGTGCAGGAGGCGTACGA
GAGCCTCTCTAGTCCAATCGAGCGGCTTGCGTACGATCAATACCTGGTCA
AGCTACGGGCCAAACGCTGGAAGCAGCGCCTCCGCCCGCTGGTCGACAAA
GTCGATGAATTTTCCGACTACTACGAACCGATTTTAGAACGCAAAGGTCA
GATCGCCGCCGCCGCCTTTCTACTGTGGGCCTTGGTTCTGTGA
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Synonyms
Publications