EWM22061.1, cds8636 (CDS) Nannochloropsis gaditana

Overview
NameEWM22061.1
Unique Namecds8636
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:532871..534463 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22061.1
Productchaperone -domain containing protein
Orig transcript idgnl|cribi|Naga_100052g27.1186.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:532871..534463 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
Homology
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|585102476|gb|EWM22061.1| (chaperone -domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1080.47 bits (2793), Expect = 0.000e+0
Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 0
Query:    1 MGAIDGDYRIRHSRRGWAVVCLACILSQFAISLANTGEAAPQSTPASENVDTTIYTYDAAPPYSRDSRKNSEHGAQIDVRPEHDTGGEISLMRQGNYQNLTSDNEKGSDKLVNELSSGLEKATGDGVLGYEQRDIEGIIRSEDEEEEEKIGSVMYNAAEEDSMAEIRGLIEAQAEEERRLAEEAAFDEARAHAAEREAVRQEAEEKVRTRRQARDDNLFEAFKEQQWAEPMARSRSGSSAADPGIDGGSGHRDGVSALAGRTSHRPRGHVLGLGQGTSNRGTTSRFSSFHAQRGRVPPTSDEAQAEMMSAAFGSVRGKASFEEMNSQHQGGTVDRTGEENGTARAHLAAKLVLETDALLYGGHGGPVGATLLEVEGGDEDWENGEGAGSAGMKNVLVKDRTSKEIQRILREGEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQRLRPLVDKVDEFSDYYEPILERKGQIAAAAFLLWALVL 530
            MGAIDGDYRIRHSRRGWAVVCLACILSQFAISLANTGEAAPQSTPASENVDTTIYTYDAAPPYSRDSRKNSEHGAQIDVRPEHDTGGEISLMRQGNYQNLTSDNEKGSDKLVNELSSGLEKATGDGVLGYEQRDIEGIIRSEDEEEEEKIGSVMYNAAEEDSMAEIRGLIEAQAEEERRLAEEAAFDEARAHAAEREAVRQEAEEKVRTRRQARDDNLFEAFKEQQWAEPMARSRSGSSAADPGIDGGSGHRDGVSALAGRTSHRPRGHVLGLGQGTSNRGTTSRFSSFHAQRGRVPPTSDEAQAEMMSAAFGSVRGKASFEEMNSQHQGGTVDRTGEENGTARAHLAAKLVLETDALLYGGHGGPVGATLLEVEGGDEDWENGEGAGSAGMKNVLVKDRTSKEIQRILREGEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQRLRPLVDKVDEFSDYYEPILERKGQIAAAAFLLWALVL
Sbjct:    1 MGAIDGDYRIRHSRRGWAVVCLACILSQFAISLANTGEAAPQSTPASENVDTTIYTYDAAPPYSRDSRKNSEHGAQIDVRPEHDTGGEISLMRQGNYQNLTSDNEKGSDKLVNELSSGLEKATGDGVLGYEQRDIEGIIRSEDEEEEEKIGSVMYNAAEEDSMAEIRGLIEAQAEEERRLAEEAAFDEARAHAAEREAVRQEAEEKVRTRRQARDDNLFEAFKEQQWAEPMARSRSGSSAADPGIDGGSGHRDGVSALAGRTSHRPRGHVLGLGQGTSNRGTTSRFSSFHAQRGRVPPTSDEAQAEMMSAAFGSVRGKASFEEMNSQHQGGTVDRTGEENGTARAHLAAKLVLETDALLYGGHGGPVGATLLEVEGGDEDWENGEGAGSAGMKNVLVKDRTSKEIQRILREGEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQRLRPLVDKVDEFSDYYEPILERKGQIAAAAFLLWALVL 530          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|508782955|gb|EOY30211.1| (Uncharacterized protein TCM_037493 [Theobroma cacao])

HSP 1 Score: 74.3294 bits (181), Expect = 1.004e-10
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  417 PNWYVVLGI-SRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQ 480
            P+WY VLGI  R A A+A+K++F++  L +HPDK S   A +AF+LV EA+  LS P  R AYDQ
Sbjct:   57 PDWYAVLGIRDRNADAEAIKNAFKKRALKVHPDKNSSAAADDAFKLVSEAWRVLSEPSSRQAYDQ 121          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|567220656|ref|XP_006413957.1| (hypothetical protein EUTSA_v10026830mg, partial [Eutrema salsugineum] >gi|557115127|gb|ESQ55410.1| hypothetical protein EUTSA_v10026830mg, partial [Eutrema salsugineum])

HSP 1 Score: 72.7886 bits (177), Expect = 1.945e-10
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0
Query:  416 EPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQRLRPLVDKVDEFSDYYEP 510
            E +WY +LG+   A  +AVK  +++L LLIHPDK    GA EAF+LV EA+  LS   +R AYDQ   K ++K+ KQ+ R +  K  +    YEP
Sbjct:   62 EADWYGILGVDPLADDEAVKKQYKKLALLIHPDKNKFHGANEAFKLVSEAWCLLSDKTKRNAYDQ---KRKSKQVKQKKRGMQQKPPK---RYEP 150          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|1109034371|ref|XP_019087144.1| (PREDICTED: dnaJ homolog subfamily B member 12-like [Camelina sativa])

HSP 1 Score: 70.8626 bits (172), Expect = 2.755e-10
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  412 GEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQ 480
            GE EE +WY +LG+   A  ++VK  +R+L LL+HPDK    GA+ AF+LV EA+  LS  + R +YDQ
Sbjct:   61 GEEEEADWYGILGVDPLADDESVKKQYRKLALLLHPDKNKLNGAEGAFKLVTEAWCMLSDKVTRTSYDQ 129          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|1137185539|gb|OMO60511.1| (hypothetical protein CCACVL1_24085 [Corchorus capsularis])

HSP 1 Score: 74.3294 bits (181), Expect = 2.873e-10
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  416 EPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQ 480
            E +WY +LG++ RA  +AVK  +R+L L++HPDK   +GA EAF+L+ EA+  LS    R AYDQ
Sbjct:   64 ESDWYGILGVNPRADDEAVKKQYRKLALMLHPDKNKSVGADEAFKLISEAWSLLSDKARRSAYDQ 128          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|1137222486|gb|OMO88127.1| (hypothetical protein COLO4_20418 [Corchorus olitorius])

HSP 1 Score: 73.9442 bits (180), Expect = 3.235e-10
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  416 EPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQ 480
            E +WY +LG++ RA  +AVK  +R+L L++HPDK   +GA EAF+L+ EA+  LS    R AYDQ
Sbjct:   64 ESDWYGILGVNPRADDEAVKKQYRKLALMLHPDKNKSVGADEAFKLISEAWSLLSDKARRSAYDQ 128          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|727532382|ref|XP_010440884.1| (PREDICTED: dnaJ homolog subfamily B member 12-like [Camelina sativa])

HSP 1 Score: 70.0922 bits (170), Expect = 3.251e-10
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  415 EEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQ 480
            EE +WY +LG+   A  +AVK ++R+L LL+HPDK    GA+ AF+LV EA+  LS  ++R +YDQ
Sbjct:   58 EESDWYKILGVDPLADDEAVKKTYRQLALLLHPDKNKFDGAEGAFKLVLEAWSLLSDEVKRASYDQ 123          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|1109029321|ref|XP_019086321.1| (PREDICTED: dnaJ homolog subfamily B member 12-like [Camelina sativa])

HSP 1 Score: 70.8626 bits (172), Expect = 4.063e-10
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  412 GEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQ 480
            GE EE +WY +LG+   A  +AVK  +++L LL+HPDK    GA+ AF+LV EA+  LS  + + +YDQ
Sbjct:  146 GEEEEADWYGILGVDPSADDEAVKKQYKKLALLLHPDKNKLNGAEGAFKLVTEAWCMLSDKVTKTSYDQ 214          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|567220654|ref|XP_006413956.1| (hypothetical protein EUTSA_v10026868mg [Eutrema salsugineum] >gi|557115126|gb|ESQ55409.1| hypothetical protein EUTSA_v10026868mg [Eutrema salsugineum])

HSP 1 Score: 72.0182 bits (175), Expect = 5.137e-10
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 0
Query:  416 EPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQR 493
            EP+WY +LG+   A   AVK  +R+L LL+HPDK    GA+ AF+LV EA+  LS  ++R+A+D       AK  K R
Sbjct:   54 EPDWYGILGVDPLADDVAVKKQYRKLALLLHPDKNKCQGAEGAFKLVLEAWSLLSDKVKRIAFDLKRTSKEAKPKKSR 131          
BLAST of EWM22061.1 vs. NCBI_GenBank
Match: gi|595791197|ref|XP_007199347.1| (uncharacterized protein LOC18767133 [Prunus persica] >gi|1162575240|ref|XP_020425393.1| uncharacterized protein LOC18767133 [Prunus persica] >gi|1162575242|ref|XP_020425394.1| uncharacterized protein LOC18767133 [Prunus persica] >gi|1162575244|ref|XP_020425395.1| uncharacterized protein LOC18767133 [Prunus persica] >gi|1139756424|gb|ONH91881.1| hypothetical protein PRUPE_8G141600 [Prunus persica] >gi|1139756425|gb|ONH91882.1| hypothetical protein PRUPE_8G141600 [Prunus persica] >gi|1139756426|gb|ONH91883.1| hypothetical protein PRUPE_8G141600 [Prunus persica] >gi|1139756427|gb|ONH91884.1| hypothetical protein PRUPE_8G141600 [Prunus persica] >gi|1139756428|gb|ONH91885.1| hypothetical protein PRUPE_8G141600 [Prunus persica] >gi|1139756429|gb|ONH91886.1| hypothetical protein PRUPE_8G141600 [Prunus persica])

HSP 1 Score: 72.7886 bits (177), Expect = 6.104e-10
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  407 RILREGERE-EPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYL 482
            +ILR   +  +PNWY +L +   A    +K ++++L  L+HPDK  H G++EAF+LV EA+  LS  ++R  YD  L
Sbjct:   54 KILRTASKTPDPNWYKILQVEPFAHTNTIKKNYKKLAFLLHPDKNPHAGSEEAFKLVSEAFRFLSDKLKRKEYDMRL 130          
The following BLAST results are available for this feature:
BLAST of EWM22061.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102476|gb|EWM22061.1|0.000e+0100.00chaperone -domain containing protein [Nannochlorop... [more]
gi|508782955|gb|EOY30211.1|1.004e-1052.31Uncharacterized protein TCM_037493 [Theobroma caca... [more]
gi|567220656|ref|XP_006413957.1|1.945e-1044.21hypothetical protein EUTSA_v10026830mg, partial [E... [more]
gi|1109034371|ref|XP_019087144.1|2.755e-1047.83PREDICTED: dnaJ homolog subfamily B member 12-like... [more]
gi|1137185539|gb|OMO60511.1|2.873e-1049.23hypothetical protein CCACVL1_24085 [Corchorus caps... [more]
gi|1137222486|gb|OMO88127.1|3.235e-1049.23hypothetical protein COLO4_20418 [Corchorus olitor... [more]
gi|727532382|ref|XP_010440884.1|3.251e-1048.48PREDICTED: dnaJ homolog subfamily B member 12-like... [more]
gi|1109029321|ref|XP_019086321.1|4.063e-1046.38PREDICTED: dnaJ homolog subfamily B member 12-like... [more]
gi|567220654|ref|XP_006413956.1|5.137e-1044.87hypothetical protein EUTSA_v10026868mg [Eutrema sa... [more]
gi|595791197|ref|XP_007199347.1|6.104e-1040.26uncharacterized protein LOC18767133 [Prunus persic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8663rna8663Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications