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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100052g9.1164.mrna |
| Orig protein id | gnl|cribi|Naga_100052g9.1164 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:495096..496678 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8645 ID=rna8645|Name=rna8645|organism=Nannochloropsis gaditana|type=mRNA|length=1193bp
AATGACCTTTGTGTTGGAGCTCGAGGTGTTGTCAGGTGACTTTCGGGGTT
ACATCGTTCCAAACGCGCCTGTTCCCCTTACCCTCTACGTTTCCCTCAAC
AGCGTGGTCCAAGCCCGTCAGGATCATGACTCGCCTTCTTGCAGCCTTCC
TCTTCCTGTCTTTGCCCTTGCTCGTGCTGGGATTTCTGCCTAGTCTACCG
AGATCAAGCTTGACTTCAAAGATCAGCGGTCTCACGTTTACGTCAAAGGT
AGGTGATAAATGTGCTCTATCGGTCAAATTGACCAAAGAAGAGGAGGAGC
AGGAAGAACGAGAGATCCAAGAGGAGATCGAGCGTAAGATGCGAGGCATG
CTAAATGCGGAGGGAAAGCCATACGCACCCTGGATGATGGATCAAATTGA
CTTGGAGGCAAGTGCTCGAGCGATTCGGGCCCGCAAGCGGCGAGAGCGAG
AGCAGGCCAGCGCGGTTGACACAGGGGATGTGTTCGACCCGCAAGGAAAG
GAGGCTTCGGTGGGCTTGAAATACCGAGTGATCAACGATCGAGACGTCGA
ATTGGGGTGGCTCACAGGCGAAGAAAAGGACAACATCGGGTACATCATTT
TCCGCAAGCGGGCGGACGAGCCCGGCGCGGAATTCGAGGAGGTGGCGTCT
TTCAAGACCTTCCCGCCCCTAAACAGCAAGGGGCCTGAGGGCGGGTTCTA
CTCCTACGTGGACCAGGGCCTCGAACCCGGGCAGTACCTCTACCGCGTCA
CGGACCAGGACAAGAAGAATAAGCGGACTTTGCTGTGCCAGTCGGGCGTG
GAGGTGCAGTCCTCCGGGGAGAAGCTCCGGAACACTGCCGTGCTCGCTCT
CTTTGGCGCCCTGGTGGTGGGGGGCGTGGTGGCCTCCTTCGTGTACGAGC
CGCTGCAGTGAGGGGGTGCGCAGGGGGCGCCTGGGGGAATGCTGTGTGTA
GTTTGGTCTTCGACGGGGAGCTCGGGCCGACCGAGCCCTCGGACGAAGAC
GCGGCTGTCGCACGCTCCCTGACGTCCGTGCCGAGTCATCGTCCCCGCAG
AGTCGTGGGGTCGTGAATGAGAATGACTGTGTCAACCAATAGTACAGTCT
AACGCGGACGTAGAAAGAAAATAAATGAGAAGCGACAAGACGCCAAATAT
TCCAGGTTGTCACGACCGATCACGTTATTATTCAAAGCAACGG back to topprotein sequence of rna8645 >rna8645-protein ID=rna8645-protein|Name=rna8645|organism=Nannochloropsis gaditana|type=polypeptide|length=398bp
MVRRLLPAIAVSTSTAKTSLRSGRVSSFSVRSTSILCSLQGGMMLRRISS
CENLRRRRLAPGRSFLSSEQQIRDFHVPLPWDKRREAREKAELDCITKAE
GVMKALDGSLVLPPDSSFYKWLEHNGKDVEGAMPKKEEFQKWLSAAESEL
NTQTKAQVGIFSGGEWWRAGHDDHLQAIRSLHSLQLQHLCAELKKSKAVF
TPHIPGDYLGKGTMAKVVAVLQAHLDGDLETRLKAAWMLQDDSTESKGWL
SEQGMEDAVHTVLNPVIATAATLYPSLPGVNKAQKKAFVKFIKSYTRDHT
DLPSKLRCVFHWTEPPLESLPTKPPAVPVPKVIDLPGYLKTQEENFPDMH
QVGKGSMELYRRVREAYYHQKKEDRDTFRTGAVYLIALGFADVYVSGL back to topmRNA from alignment at KK037249.1:495096..496678+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8645 ID=rna8645|Name=rna8645|organism=Nannochloropsis gaditana|type=mRNA|length=1583bp|location=Sequence derived from alignment at KK037249.1:495096..496678+ (Nannochloropsis gaditana)
ATGGTCCGTCGGCTCTTGCCTGCCATTGCAGTGTCTACTTCGACCGCGAA
AACGAGTCTTCGATCCGGACGAGTCTCCTCTTTCAGCGTGCGTTCCACAT
CAATTTTGTGCAGCTTGCAGGGCGGAATGATGCTTCGACGCATCAGCTCC
TGTGAGAACCTACGCAGGCGGCGACTAGCCCCTGGTCGGAGCTTCTTGTC
CAGCGAGCAACAAATTCGCGACTTCCACGTACCCCTGCCGTGGGATAAAC
GAAGAGGTAGGCTAAATGGGGCACGTTTAAGCAGATACTTTTTCTTGAGT
GAGACCGACCGAGTTTCTATCACACGCGCAGAGGCTCGTGAGAAAGCCGA
GCTCGACTGCATTACGAAGGCGGAAGGCGTAATGAAAGCTTTGGATGGAT
CACTAGTGCTACCACCAGGTGACTATtaggagctggaggaaaaattgccT
GAGAAATCCTTGGTTGCTACTCCTCGCTTCTTCACACCGCACCGTACACG
GCCTCTACCCACCACTCACAGATTCTTCCTTTTACAAATGGCTGGAGCAC
AATGGCAAAGACGTGGAAGGCGCGATgccaaagaaggaggaatttCAAAA
ATGGCTATCTGCGGCCGAGTCAGAGCTAAATACACAGACTAAGGCGCAGG
TTGGCATATTttcggggggggaatggtggAGAGCAGGTCACGATGACCAC
CTCCAGGCGATTCGGTCCCTACATTCTTTGCAATTGCAGCACCTATGCGC
AGAATtaaagaagagcaaggctGTTTTCACGCCACATATTCCTGGTAGGT
ACTCTCCGAGCCGCAACAATGGACATGAAGACATTGGTGGCCGGGGATCG
AGCAGGTCTTTAAAGTGTCTTACTTGCTATTTCAAACCCGCAGGCGACTA
TCTTGGAAAGGGGACGATGGCCAAGGTTGTGGCTGTGCTTCAGGCACATT
TAGATGGAGACCTTGAGACGCGATTAAAAGGTGTGTGCGACTCATACTCT
TAATCACCTGCTTGTGCCGTGGTACTTTTTGTCTGACACATACCTTATCG
ATCTCCACTCGCTGATCCATTTGTTTACTTGTATATCAGCCGCGTGGATG
CTGCAAGACGATAGCACGGAGAGCAAAGGCTGGCTCTCCGAGcagggcat
ggaggacgcCGTCCACACTGTCCTAAACCCTGTTATCGCAACTGCTGCGA
CTTTGTACCCCTCATTGCCTGGCGTCAACAAAGCTCAGAAGAAGGCATTC
GTGAAGTTTATCAAGTCATATACTCGTGATCATACGGATCTGCCATCTAA
GCTTCGTTGTGTCTTCCATTGGACAGAGCCTCCACTGGAAAGCCTTCCCA
CCAAACCTCCCGCTGTACCAGTTCCTAAAGTTATTGATCTGCCTGGCTAC
CTGAAGACACAGGAAGAGAATTTTCCCGACATGCATCAAGTCGGGAAAGG
CTCCATGGAATTGTATAGACGGGTGCGAGAAGCTTACTACCaccaaaaaa
aggaggatcGCGATACGTTTCGTACGGGTGCCGTGTATTTGATTGCCCTT
GGCTTTGCCGACGTATACGTCAGCGGATTATGA back to topCoding sequence (CDS) from alignment at KK037249.1:495096..496678+ >rna8645 ID=rna8645|Name=rna8645|organism=Nannochloropsis gaditana|type=CDS|length=5985bp|location=Sequence derived from alignment at KK037249.1:495096..496678+ (Nannochloropsis gaditana)
ATGGTCCGTCGGCTCTTGCCTGCCATTGCAGTGTCTACTTCGACCGCGAA
AACGAGTCTTCGATCCGGACGAGTCTCCTCTTTCAGCGTGCGTTCCACAT
CAATTTTGTGCAGCTTGCAGGGCGGAATGATGCTTCGACGCATCAGCTCC
TGTGAGAACCTACGCAGGCGGCGACTAGCCCCTGGTCGGAGCTTCTTGTC
CAGCGAGCAACAAATTCGCGACTTCCACGTACCCCTGCCGTGGGATAAAC
GAAGAGAGGCTCGTGAGAAAGCCGAGCTCGACTGCATTACGAAGGCGGAA
GGCGTAATGAAAGCTTTGGATGGATCACTAGTGCTACCACCAGATTCTTC
CTTTTACAAATGGCTGGAGCACAATGGCAAAGACGTGGAAGGCGCGATgc
caaagaaggaggaatttCAAAAATGGCTATCTGCGGCCGAGTCAGAGCTA
AATACACAGACTAAGGCGCAGGTTGGCATATTttcggggggggaatggtg
gAGAGCAGGTCACGATGACCACCTCCAGGCGATTCGGTCCCTACATTCTT
TGCAATTGCAGCACCTATGCGCAGAATtaaagaagagcaaggctGTTTTC
ACGCCACATATTCCTGGCGACTATCTTGGAAAGGGGACGATGGCCAAGGT
TGTGGCTGTGCTTCAGGCACATTTAGATGGAGACCTTGAGACGCGATTAA
AAGCCGCGTGGATGCTGCAAGACGATAGCACGGAGAGCAAAGGCTGGCTC
TCCGAGcagggcatggaggacgcCGTCCACACTGTCCTAAACCCTGTTAT
CGCAACTGCTGCGACTTTGTACCCCTCATTGCCTGGCGTCAACAAAGCTC
AGAAGAAGGCATTCGTGAAGTTTATCAAGTCATATACTCGTGATCATACG
GATCTGCCATCTAAGCTTCGTTGTGTCTTCCATTGGACAGAGCCTCCACT
GGAAAGCCTTCCCACCAAACCTCCCGCTGTACCAGTTCCTAAAGTTATTG
ATCTGCCTGGCTACCTGAAGACACAGGAAGAGAATTTTCCCGACATGCAT
CAAGTCGGGAAAGGCTCCATGGAATTGTATAGACGGGTGCGAGAAGCTTA
CTACCaccaaaaaaaggaggatcGCGATACGTTTCGTACGGGTGCCGTGT
ATTTGATTGCCCTTGGCTTTGCCGACGTATACGTCAGCGGATTATGAATG
GTCCGTCGGCTCTTGCCTGCCATTGCAGTGTCTACTTCGACCGCGAAAAC
GAGTCTTCGATCCGGACGAGTCTCCTCTTTCAGCGTGCGTTCCACATCAA
TTTTGTGCAGCTTGCAGGGCGGAATGATGCTTCGACGCATCAGCTCCTGT
GAGAACCTACGCAGGCGGCGACTAGCCCCTGGTCGGAGCTTCTTGTCCAG
CGAGCAACAAATTCGCGACTTCCACGTACCCCTGCCGTGGGATAAACGAA
GAGAGGCTCGTGAGAAAGCCGAGCTCGACTGCATTACGAAGGCGGAAGGC
GTAATGAAAGCTTTGGATGGATCACTAGTGCTACCACCAGATTCTTCCTT
TTACAAATGGCTGGAGCACAATGGCAAAGACGTGGAAGGCGCGATgccaa
agaaggaggaatttCAAAAATGGCTATCTGCGGCCGAGTCAGAGCTAAAT
ACACAGACTAAGGCGCAGGTTGGCATATTttcggggggggaatggtggAG
AGCAGGTCACGATGACCACCTCCAGGCGATTCGGTCCCTACATTCTTTGC
AATTGCAGCACCTATGCGCAGAATtaaagaagagcaaggctGTTTTCACG
CCACATATTCCTGGCGACTATCTTGGAAAGGGGACGATGGCCAAGGTTGT
GGCTGTGCTTCAGGCACATTTAGATGGAGACCTTGAGACGCGATTAAAAG
CCGCGTGGATGCTGCAAGACGATAGCACGGAGAGCAAAGGCTGGCTCTCC
GAGcagggcatggaggacgcCGTCCACACTGTCCTAAACCCTGTTATCGC
AACTGCTGCGACTTTGTACCCCTCATTGCCTGGCGTCAACAAAGCTCAGA
AGAAGGCATTCGTGAAGTTTATCAAGTCATATACTCGTGATCATACGGAT
CTGCCATCTAAGCTTCGTTGTGTCTTCCATTGGACAGAGCCTCCACTGGA
AAGCCTTCCCACCAAACCTCCCGCTGTACCAGTTCCTAAAGTTATTGATC
TGCCTGGCTACCTGAAGACACAGGAAGAGAATTTTCCCGACATGCATCAA
GTCGGGAAAGGCTCCATGGAATTGTATAGACGGGTGCGAGAAGCTTACTA
CCaccaaaaaaaggaggatcGCGATACGTTTCGTACGGGTGCCGTGTATT
TGATTGCCCTTGGCTTTGCCGACGTATACGTCAGCGGATTATGAATGGTC
CGTCGGCTCTTGCCTGCCATTGCAGTGTCTACTTCGACCGCGAAAACGAG
TCTTCGATCCGGACGAGTCTCCTCTTTCAGCGTGCGTTCCACATCAATTT
TGTGCAGCTTGCAGGGCGGAATGATGCTTCGACGCATCAGCTCCTGTGAG
AACCTACGCAGGCGGCGACTAGCCCCTGGTCGGAGCTTCTTGTCCAGCGA
GCAACAAATTCGCGACTTCCACGTACCCCTGCCGTGGGATAAACGAAGAG
AGGCTCGTGAGAAAGCCGAGCTCGACTGCATTACGAAGGCGGAAGGCGTA
ATGAAAGCTTTGGATGGATCACTAGTGCTACCACCAGATTCTTCCTTTTA
CAAATGGCTGGAGCACAATGGCAAAGACGTGGAAGGCGCGATgccaaaga
aggaggaatttCAAAAATGGCTATCTGCGGCCGAGTCAGAGCTAAATACA
CAGACTAAGGCGCAGGTTGGCATATTttcggggggggaatggtggAGAGC
AGGTCACGATGACCACCTCCAGGCGATTCGGTCCCTACATTCTTTGCAAT
TGCAGCACCTATGCGCAGAATtaaagaagagcaaggctGTTTTCACGCCA
CATATTCCTGGCGACTATCTTGGAAAGGGGACGATGGCCAAGGTTGTGGC
TGTGCTTCAGGCACATTTAGATGGAGACCTTGAGACGCGATTAAAAGCCG
CGTGGATGCTGCAAGACGATAGCACGGAGAGCAAAGGCTGGCTCTCCGAG
cagggcatggaggacgcCGTCCACACTGTCCTAAACCCTGTTATCGCAAC
TGCTGCGACTTTGTACCCCTCATTGCCTGGCGTCAACAAAGCTCAGAAGA
AGGCATTCGTGAAGTTTATCAAGTCATATACTCGTGATCATACGGATCTG
CCATCTAAGCTTCGTTGTGTCTTCCATTGGACAGAGCCTCCACTGGAAAG
CCTTCCCACCAAACCTCCCGCTGTACCAGTTCCTAAAGTTATTGATCTGC
CTGGCTACCTGAAGACACAGGAAGAGAATTTTCCCGACATGCATCAAGTC
GGGAAAGGCTCCATGGAATTGTATAGACGGGTGCGAGAAGCTTACTACCa
ccaaaaaaaggaggatcGCGATACGTTTCGTACGGGTGCCGTGTATTTGA
TTGCCCTTGGCTTTGCCGACGTATACGTCAGCGGATTATGAATGGTCCGT
CGGCTCTTGCCTGCCATTGCAGTGTCTACTTCGACCGCGAAAACGAGTCT
TCGATCCGGACGAGTCTCCTCTTTCAGCGTGCGTTCCACATCAATTTTGT
GCAGCTTGCAGGGCGGAATGATGCTTCGACGCATCAGCTCCTGTGAGAAC
CTACGCAGGCGGCGACTAGCCCCTGGTCGGAGCTTCTTGTCCAGCGAGCA
ACAAATTCGCGACTTCCACGTACCCCTGCCGTGGGATAAACGAAGAGAGG
CTCGTGAGAAAGCCGAGCTCGACTGCATTACGAAGGCGGAAGGCGTAATG
AAAGCTTTGGATGGATCACTAGTGCTACCACCAGATTCTTCCTTTTACAA
ATGGCTGGAGCACAATGGCAAAGACGTGGAAGGCGCGATgccaaagaagg
aggaatttCAAAAATGGCTATCTGCGGCCGAGTCAGAGCTAAATACACAG
ACTAAGGCGCAGGTTGGCATATTttcggggggggaatggtggAGAGCAGG
TCACGATGACCACCTCCAGGCGATTCGGTCCCTACATTCTTTGCAATTGC
AGCACCTATGCGCAGAATtaaagaagagcaaggctGTTTTCACGCCACAT
ATTCCTGGCGACTATCTTGGAAAGGGGACGATGGCCAAGGTTGTGGCTGT
GCTTCAGGCACATTTAGATGGAGACCTTGAGACGCGATTAAAAGCCGCGT
GGATGCTGCAAGACGATAGCACGGAGAGCAAAGGCTGGCTCTCCGAGcag
ggcatggaggacgcCGTCCACACTGTCCTAAACCCTGTTATCGCAACTGC
TGCGACTTTGTACCCCTCATTGCCTGGCGTCAACAAAGCTCAGAAGAAGG
CATTCGTGAAGTTTATCAAGTCATATACTCGTGATCATACGGATCTGCCA
TCTAAGCTTCGTTGTGTCTTCCATTGGACAGAGCCTCCACTGGAAAGCCT
TCCCACCAAACCTCCCGCTGTACCAGTTCCTAAAGTTATTGATCTGCCTG
GCTACCTGAAGACACAGGAAGAGAATTTTCCCGACATGCATCAAGTCGGG
AAAGGCTCCATGGAATTGTATAGACGGGTGCGAGAAGCTTACTACCacca
aaaaaaggaggatcGCGATACGTTTCGTACGGGTGCCGTGTATTTGATTG
CCCTTGGCTTTGCCGACGTATACGTCAGCGGATTATGAATGGTCCGTCGG
CTCTTGCCTGCCATTGCAGTGTCTACTTCGACCGCGAAAACGAGTCTTCG
ATCCGGACGAGTCTCCTCTTTCAGCGTGCGTTCCACATCAATTTTGTGCA
GCTTGCAGGGCGGAATGATGCTTCGACGCATCAGCTCCTGTGAGAACCTA
CGCAGGCGGCGACTAGCCCCTGGTCGGAGCTTCTTGTCCAGCGAGCAACA
AATTCGCGACTTCCACGTACCCCTGCCGTGGGATAAACGAAGAGAGGCTC
GTGAGAAAGCCGAGCTCGACTGCATTACGAAGGCGGAAGGCGTAATGAAA
GCTTTGGATGGATCACTAGTGCTACCACCAGATTCTTCCTTTTACAAATG
GCTGGAGCACAATGGCAAAGACGTGGAAGGCGCGATgccaaagaaggagg
aatttCAAAAATGGCTATCTGCGGCCGAGTCAGAGCTAAATACACAGACT
AAGGCGCAGGTTGGCATATTttcggggggggaatggtggAGAGCAGGTCA
CGATGACCACCTCCAGGCGATTCGGTCCCTACATTCTTTGCAATTGCAGC
ACCTATGCGCAGAATtaaagaagagcaaggctGTTTTCACGCCACATATT
CCTGGCGACTATCTTGGAAAGGGGACGATGGCCAAGGTTGTGGCTGTGCT
TCAGGCACATTTAGATGGAGACCTTGAGACGCGATTAAAAGCCGCGTGGA
TGCTGCAAGACGATAGCACGGAGAGCAAAGGCTGGCTCTCCGAGcagggc
atggaggacgcCGTCCACACTGTCCTAAACCCTGTTATCGCAACTGCTGC
GACTTTGTACCCCTCATTGCCTGGCGTCAACAAAGCTCAGAAGAAGGCAT
TCGTGAAGTTTATCAAGTCATATACTCGTGATCATACGGATCTGCCATCT
AAGCTTCGTTGTGTCTTCCATTGGACAGAGCCTCCACTGGAAAGCCTTCC
CACCAAACCTCCCGCTGTACCAGTTCCTAAAGTTATTGATCTGCCTGGCT
ACCTGAAGACACAGGAAGAGAATTTTCCCGACATGCATCAAGTCGGGAAA
GGCTCCATGGAATTGTATAGACGGGTGCGAGAAGCTTACTACCaccaaaa
aaaggaggatcGCGATACGTTTCGTACGGGTGCCGTGTATTTGATTGCCC
TTGGCTTTGCCGACGTATACGTCAGCGGATTATGA back to top
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