EWM22039.1, cds8618 (CDS) Nannochloropsis gaditana

Overview
NameEWM22039.1
Unique Namecds8618
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:495096..495351 +
Alignment locationKK037249.1:495427..495513 +
Alignment locationKK037249.1:495617..495889 +
Alignment locationKK037249.1:495989..496075 +
Alignment locationKK037249.1:496185..496678 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22039.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g9.1164.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:495096..495351 +
KK037249.1supercontigKK037249.1:495427..495513 +
KK037249.1supercontigKK037249.1:495617..495889 +
KK037249.1supercontigKK037249.1:495989..496075 +
KK037249.1supercontigKK037249.1:496185..496678 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22039.1 vs. NCBI_GenBank
Match: gi|585102454|gb|EWM22039.1| (hypothetical protein Naga_100052g9 [Nannochloropsis gaditana])

HSP 1 Score: 825.469 bits (2131), Expect = 0.000e+0
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0 
Query:    1 MVRRLLPAIAVSTSTAKTSLRSGRVSSFSVRSTSILCSLQGGMMLRRISSCENLRRRRLAPGRSFLSSEQQIRDFHVPLPWDKRREAREKAELDCITKAEGVMKALDGSLVLPPDSSFYKWLEHNGKDVEGAMPKKEEFQKWLSAAESELNTQTKAQVGIFSGGEWWRAGHDDHLQAIRSLHSLQLQHLCAELKKSKAVFTPHIPGDYLGKGTMAKVVAVLQAHLDGDLETRLKAAWMLQDDSTESKGWLSEQGMEDAVHTVLNPVIATAATLYPSLPGVNKAQKKAFVKFIKSYTRDHTDLPSKLRCVFHWTEPPLESLPTKPPAVPVPKVIDLPGYLKTQEENFPDMHQVGKGSMELYRRVREAYYHQKKEDRDTFRTGAVYLIALGFADVYVSGL 398
            MVRRLLPAIAVSTSTAKTSLRSGRVSSFSVRSTSILCSLQGGMMLRRISSCENLRRRRLAPGRSFLSSEQQIRDFHVPLPWDKRREAREKAELDCITKAEGVMKALDGSLVLPPDSSFYKWLEHNGKDVEGAMPKKEEFQKWLSAAESELNTQTKAQVGIFSGGEWWRAGHDDHLQAIRSLHSLQLQHLCAELKKSKAVFTPHIPGDYLGKGTMAKVVAVLQAHLDGDLETRLKAAWMLQDDSTESKGWLSEQGMEDAVHTVLNPVIATAATLYPSLPGVNKAQKKAFVKFIKSYTRDHTDLPSKLRCVFHWTEPPLESLPTKPPAVPVPKVIDLPGYLKTQEENFPDMHQVGKGSMELYRRVREAYYHQKKEDRDTFRTGAVYLIALGFADVYVSGL
Sbjct:    1 MVRRLLPAIAVSTSTAKTSLRSGRVSSFSVRSTSILCSLQGGMMLRRISSCENLRRRRLAPGRSFLSSEQQIRDFHVPLPWDKRREAREKAELDCITKAEGVMKALDGSLVLPPDSSFYKWLEHNGKDVEGAMPKKEEFQKWLSAAESELNTQTKAQVGIFSGGEWWRAGHDDHLQAIRSLHSLQLQHLCAELKKSKAVFTPHIPGDYLGKGTMAKVVAVLQAHLDGDLETRLKAAWMLQDDSTESKGWLSEQGMEDAVHTVLNPVIATAATLYPSLPGVNKAQKKAFVKFIKSYTRDHTDLPSKLRCVFHWTEPPLESLPTKPPAVPVPKVIDLPGYLKTQEENFPDMHQVGKGSMELYRRVREAYYHQKKEDRDTFRTGAVYLIALGFADVYVSGL 398
The following BLAST results are available for this feature:
BLAST of EWM22039.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102454|gb|EWM22039.1|0.000e+0100.00hypothetical protein Naga_100052g9 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8645rna8645Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications