rna8644, rna8644 (mRNA) Nannochloropsis gaditana

Overview
Namerna8644
Unique Namerna8644
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length582
Alignment locationKK037249.1:493296..494809 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g8.1168.mrna
Orig protein idgnl|cribi|Naga_100052g8.1168
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:493296..494809 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100052g8gene8379Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8644rna8644-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22043.1cds8617Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8644 ID=rna8644|Name=rna8644|organism=Nannochloropsis gaditana|type=mRNA|length=582bp
ATGATCGTGGAGATGCAGCTGCAGCCAGAGTCAGGAAACATGTGTACCTA
CCTGTCATACTTAATCACAAATGCCCAATTAGTAATGACTGAGAGCATTG
GGTACAGTGCTGAGGTTCTACTTAAACCGTCTGGAGTACTCGTCAGGGAC
CATCGAGCCCTATCTCCTGAAACGCTGCTATTTTTTATCCTGCTGCTAAC
CTCGCTACCGTCCGCATCCGAGTTTTCACCACCTTCTCCGCCTTTGGTCG
CCTCATTCTCAATCAGAAAGCCCAGTCAGCGCATTACTATCACCAGCATA
TGCAGTAAGTTGACGCCTGCTTTTTTCGAAGCATGCAAATCACTAGTTGC
CTTCCCTTACGATGATGGCAGCATCTGCCGGCTACACTTGATTTCAACTT
TCGGATCGACCGAAAAAAATGCCACGTCGACGACGATGTGTGTGACTGTG
GGGTGGGGTCAGAAATCTCAGCCTGCAGTAGTCTTGAGGGCGCAACTGGA
CCGGCTTTTGCCTGTCGTGCGAAGCCTCGGAGGGGCAGCGTTCGAGAACC
TGAAACAAACACGCGCGTGGGAGGACGCCTGA
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protein sequence of rna8644

>rna8644-protein ID=rna8644-protein|Name=rna8644|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
MTRLLAAFLFLSLPLLVLGFLPSLPRSSLTSKISGLTFTSKVGDKCALSV
KLTKEEEEQEEREIQEEIERKMRGMLNAEGKPYAPWMMDQIDLEASARAI
RARKRREREQASAVDTGDVFDPQGKEASVGLKYRVINDRDVELGWLTGEE
KDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLE
PGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGG
VVASFVYEPLQ
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mRNA from alignment at KK037249.1:493296..494809-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8644 ID=rna8644|Name=rna8644|organism=Nannochloropsis gaditana|type=mRNA|length=1514bp|location=Sequence derived from alignment at KK037249.1:493296..494809- (Nannochloropsis gaditana)
AATGACCTTTGTGTTGGAGCTCGAGGTGTTGTCAGGTGACTTTCGGGGTT
ACATCGTTCCAAACGCGCCTGTTCCCCTTACCCTCTACGTTTCCCTCAAC
AGCGTGGTCCAAGCCCGTCAGGATCATGACTCGCCTTCTTGCAGCCTTCC
TCTTCCTGTCTTTGCCCTTGCTCGTGCTGGGATTTCTGCCTAGTCTACCG
AGATCAAGCTTGACTTCAAAGGTAAGCCGAGCTGCATATGTTGGAAAGTC
GTGCTGGTTAATCCATCATTAGAAGGCGATGTAGAGGGTAGCATACCTCG
GCCGCTGGGGTAGCTAGCTAGGTGCTGTGTTTCAAGAGAAAAGTCAATTT
TTATCGCCTCCTTTCGCAATCTTTTCTTCTCACGCGTTGACTTCTTCCTC
TTCCAGATCAGCGGTCTCACGTTTACGTCAAAGGTAGGTGATAAATGTGC
TCTATCGGTCAAATTGACCAAAGAAGAGGAGGAGCAGGAAGAACGAGAGA
TCCAAGAGGAGATCGAGCGTAAGATGCGAGGCATGCTAAATGCGGAGGGA
AAGCCATACGCACCCTGGATGATGGATCAAATTGACTTGGAGGCAAGTGC
TCGAGCGATTCGGGCCCGCAAGCGGCGAGAGCGAGAGCAGGCCAGCGCGG
TTGACACAGGGGATGTGTTCGACCCGCAAGGAAAGGAGGCTTCGGTGGGC
TTGAAATACCGAGTGATCAACGATCGAGACGTCGAATTGGGGGTAAGTCT
GATAACTTTGTTATTTCACGCCTGATACTCCGAAGACGTTTTGTTCTTTC
CGTCGCCGACGAAGCATGAATTCGACTCCATGTTCAGGGCGCCATCGTGT
TAATGCTGTCTCCACTCGTGCCACACAGTGGCTCACAGGCGAAGAAAAGG
ACAACATCGGGTACATCATTTTCCGCAAGCGGGCGGACGAGCCCGGCGCG
GAATTCGAGGAGGTGGCGTCTTTCAAGACCTTCCCGCCCCTAAACAGCAA
GGGGCCTGAGGGCGGGTTCTACTCCTACGTGGACCAGGGCCTCGAACCCG
GGCAGTACCTCTACCGCGTCACGGACCAGGACAAGAAGAATAAGCGGACT
TTGCTGTGCCAGTCGGGCGTGGAGGTGCAGTCCTCCGGGGAGAAGCTCCG
GAACACTGCCGTGCTCGCTCTCTTTGGCGCCCTGGTGGTGGGGGGCGTGG
TGGCCTCCTTCGTGTACGAGCCGCTGCAGTGAGGGGGTGCGCAGGGGGCG
CCTGGGGGAATGCTGTGTGTAGTTTGGTCTTCGACGGGGAGCTCGGGCCG
ACCGAGCCCTCGGACGAAGACGCGGCTGTCGCACGCTCCCTGACGTCCGT
GCCGAGTCATCGTCCCCGCAGAGTCGTGGGGTCGTGAATGAGAATGACTG
TGTCAACCAATAGTACAGTCTAACGCGGACGTAGAAAGAAAATAAATGAG
AAGCGACAAGACGCCAAATATTCCAGGTTGTCACGACCGATCACGTTATT
ATTCAAAGCAACGG
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Coding sequence (CDS) from alignment at KK037249.1:493296..494809-

>rna8644 ID=rna8644|Name=rna8644|organism=Nannochloropsis gaditana|type=CDS|length=2358bp|location=Sequence derived from alignment at KK037249.1:493296..494809- (Nannochloropsis gaditana)
TGGCTCACAGGCGAAGAAAAGGACAACATCGGGTACATCATTTTCCGCAA
GCGGGCGGACGAGCCCGGCGCGGAATTCGAGGAGGTGGCGTCTTTCAAGA
CCTTCCCGCCCCTAAACAGCAAGGGGCCTGAGGGCGGGTTCTACTCCTAC
GTGGACCAGGGCCTCGAACCCGGGCAGTACCTCTACCGCGTCACGGACCA
GGACAAGAAGAATAAGCGGACTTTGCTGTGCCAGTCGGGCGTGGAGGTGC
AGTCCTCCGGGGAGAAGCTCCGGAACACTGCCGTGCTCGCTCTCTTTGGC
GCCCTGGTGGTGGGGGGCGTGGTGGCCTCCTTCGTGTACGAGCCGCTGCA
GTGAATCAGCGGTCTCACGTTTACGTCAAAGGTAGGTGATAAATGTGCTC
TATCGGTCAAATTGACCAAAGAAGAGGAGGAGCAGGAAGAACGAGAGATC
CAAGAGGAGATCGAGCGTAAGATGCGAGGCATGCTAAATGCGGAGGGAAA
GCCATACGCACCCTGGATGATGGATCAAATTGACTTGGAGGCAAGTGCTC
GAGCGATTCGGGCCCGCAAGCGGCGAGAGCGAGAGCAGGCCAGCGCGGTT
GACACAGGGGATGTGTTCGACCCGCAAGGAAAGGAGGCTTCGGTGGGCTT
GAAATACCGAGTGATCAACGATCGAGACGTCGAATTGGGGATGACTCGCC
TTCTTGCAGCCTTCCTCTTCCTGTCTTTGCCCTTGCTCGTGCTGGGATTT
CTGCCTAGTCTACCGAGATCAAGCTTGACTTCAAAGTGGCTCACAGGCGA
AGAAAAGGACAACATCGGGTACATCATTTTCCGCAAGCGGGCGGACGAGC
CCGGCGCGGAATTCGAGGAGGTGGCGTCTTTCAAGACCTTCCCGCCCCTA
AACAGCAAGGGGCCTGAGGGCGGGTTCTACTCCTACGTGGACCAGGGCCT
CGAACCCGGGCAGTACCTCTACCGCGTCACGGACCAGGACAAGAAGAATA
AGCGGACTTTGCTGTGCCAGTCGGGCGTGGAGGTGCAGTCCTCCGGGGAG
AAGCTCCGGAACACTGCCGTGCTCGCTCTCTTTGGCGCCCTGGTGGTGGG
GGGCGTGGTGGCCTCCTTCGTGTACGAGCCGCTGCAGTGAATCAGCGGTC
TCACGTTTACGTCAAAGGTAGGTGATAAATGTGCTCTATCGGTCAAATTG
ACCAAAGAAGAGGAGGAGCAGGAAGAACGAGAGATCCAAGAGGAGATCGA
GCGTAAGATGCGAGGCATGCTAAATGCGGAGGGAAAGCCATACGCACCCT
GGATGATGGATCAAATTGACTTGGAGGCAAGTGCTCGAGCGATTCGGGCC
CGCAAGCGGCGAGAGCGAGAGCAGGCCAGCGCGGTTGACACAGGGGATGT
GTTCGACCCGCAAGGAAAGGAGGCTTCGGTGGGCTTGAAATACCGAGTGA
TCAACGATCGAGACGTCGAATTGGGGATGACTCGCCTTCTTGCAGCCTTC
CTCTTCCTGTCTTTGCCCTTGCTCGTGCTGGGATTTCTGCCTAGTCTACC
GAGATCAAGCTTGACTTCAAAGTGGCTCACAGGCGAAGAAAAGGACAACA
TCGGGTACATCATTTTCCGCAAGCGGGCGGACGAGCCCGGCGCGGAATTC
GAGGAGGTGGCGTCTTTCAAGACCTTCCCGCCCCTAAACAGCAAGGGGCC
TGAGGGCGGGTTCTACTCCTACGTGGACCAGGGCCTCGAACCCGGGCAGT
ACCTCTACCGCGTCACGGACCAGGACAAGAAGAATAAGCGGACTTTGCTG
TGCCAGTCGGGCGTGGAGGTGCAGTCCTCCGGGGAGAAGCTCCGGAACAC
TGCCGTGCTCGCTCTCTTTGGCGCCCTGGTGGTGGGGGGCGTGGTGGCCT
CCTTCGTGTACGAGCCGCTGCAGTGAATCAGCGGTCTCACGTTTACGTCA
AAGGTAGGTGATAAATGTGCTCTATCGGTCAAATTGACCAAAGAAGAGGA
GGAGCAGGAAGAACGAGAGATCCAAGAGGAGATCGAGCGTAAGATGCGAG
GCATGCTAAATGCGGAGGGAAAGCCATACGCACCCTGGATGATGGATCAA
ATTGACTTGGAGGCAAGTGCTCGAGCGATTCGGGCCCGCAAGCGGCGAGA
GCGAGAGCAGGCCAGCGCGGTTGACACAGGGGATGTGTTCGACCCGCAAG
GAAAGGAGGCTTCGGTGGGCTTGAAATACCGAGTGATCAACGATCGAGAC
GTCGAATTGGGGATGACTCGCCTTCTTGCAGCCTTCCTCTTCCTGTCTTT
GCCCTTGCTCGTGCTGGGATTTCTGCCTAGTCTACCGAGATCAAGCTTGA
CTTCAAAG
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Synonyms
Publications