EWM22043.1, cds8617 (CDS) Nannochloropsis gaditana

Overview
NameEWM22043.1
Unique Namecds8617
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:494589..494684 -
Alignment locationKK037249.1:494068..494403 -
Alignment locationKK037249.1:493578..493931 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22043.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g8.1168.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:494589..494684 -
KK037249.1supercontigKK037249.1:494068..494403 -
KK037249.1supercontigKK037249.1:493578..493931 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
Homology
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|585102458|gb|EWM22043.1| (hypothetical protein Naga_100052g8 [Nannochloropsis gaditana])

HSP 1 Score: 529.635 bits (1363), Expect = 0.000e+0
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query:    1 MTRLLAAFLFLSLPLLVLGFLPSLPRSSLTSKISGLTFTSKVGDKCALSVKLTKEEEEQEEREIQEEIERKMRGMLNAEGKPYAPWMMDQIDLEASARAIRARKRREREQASAVDTGDVFDPQGKEASVGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ 261
            MTRLLAAFLFLSLPLLVLGFLPSLPRSSLTSKISGLTFTSKVGDKCALSVKLTKEEEEQEEREIQEEIERKMRGMLNAEGKPYAPWMMDQIDLEASARAIRARKRREREQASAVDTGDVFDPQGKEASVGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ
Sbjct:    1 MTRLLAAFLFLSLPLLVLGFLPSLPRSSLTSKISGLTFTSKVGDKCALSVKLTKEEEEQEEREIQEEIERKMRGMLNAEGKPYAPWMMDQIDLEASARAIRARKRREREQASAVDTGDVFDPQGKEASVGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ 261          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|298706051|emb|CBJ29161.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 135.576 bits (340), Expect = 5.156e-35
Identity = 87/247 (35.22%), Postives = 134/247 (54.25%), Query Frame = 0
Query:    1 MTRLLAAFLF-LSLPLLVLGFLPSLPRSSLTSKISGLTFTSKVGDKCA------LSVKLTKEEEEQEEREIQEEIERKMRGMLNAEGKPYAPWMMDQIDLEASAR---AIRARKRREREQASAVDTGDVFDPQGKEAS-VGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRN 236
            MTR ++  L  ++   L   F+   P SSL+  + G    ++   K +       S ++TK+ E  E  E  ++  +    M N +G  YAPWM+D  D E  A+   +I ARK +E             DPQ  E S  GL  + ++D  VEL W TG E+ NIG+I+ R+ A     E++E+AS+K FPPLNSKGP GG Y+Y D  ++ G ++YR++D  K   ++ LCQ+ +E+QS  ++L+ 
Sbjct:    1 MTRCISMCLVAMAAAPLTKAFV--APGSSLSVSVLGREGVTRSCSKASARGTSSTSCRMTKKTE-TEGAEGDKKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTD--EWQEIASYKDFPPLNSKGPGGGIYTYADDNVDLGTWVYRISDISKSGVKSDLCQTLIELQSGADELQT 242          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|922856441|gb|KOO24795.1| (peptidase s8 s53 subtilisin kexin sedolisin [Chrysochromulina sp. CCMP291])

HSP 1 Score: 130.183 bits (326), Expect = 1.110e-32
Identity = 73/213 (34.27%), Postives = 120/213 (56.34%), Query Frame = 0
Query:   56 EEEQEEREIQEEIERKMRGMLN----AEGKPYAPWMMDQIDLEASARAIRARKRREREQASAVDTGDVF-DPQGKE--ASVGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ 261
            EEE +  ++Q E+    + ++N    A G  +APWM  ++D EA A+A   R  R+   A+   +  +  DPQ  E  A  GLK +V+++ +VEL W T +E  N G+I+ R++  +P  EF ++AS+K+F PL +KG  GG Y ++D  + PG ++YR+ D +   +R+ +CQ  VE+ S  E  +   V  L   L +  VV   + +P+Q
Sbjct:   75 EEEYQSEQVQAEMSAGAKKVINNMRSASGVEFAPWM--KVDAEAIAKAKMERAERKIRSATTKKSDTMLIDPQAAELGAGGGLKSKVLSEEEVELRWSTQDEVGNAGFIVQRRKGGQP--EFADIASYKSFSPLKTKGVAGGEYVFLDDAVSPGTWVYRILDCNTNGERSAVCQKLVEIDSKSETSQTVLVGVLIAGLALALVVGGVLSDPIQ 283          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|676382027|ref|XP_009034292.1| (hypothetical protein AURANDRAFT_62132 [Aureococcus anophagefferens] >gi|323454832|gb|EGB10701.1| hypothetical protein AURANDRAFT_62132 [Aureococcus anophagefferens])

HSP 1 Score: 135.961 bits (341), Expect = 1.382e-32
Identity = 81/221 (36.65%), Postives = 125/221 (56.56%), Query Frame = 0
Query:   50 VKLTKEEEEQEEREIQEEIER----KMRGMLNAEGKPYAPWMMDQIDLEAS--ARAIRARKRREREQASAVDTG--DVFDPQGKEAS-VGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ 261
              L   + + EE EI  + E+    K   M N  G  YAPWM++Q+D +A   ARA+R  K+R    A     G  ++ D    E S +GLK + ++D +VEL W T +E+DN G+++ +K      +E+EEVAS+ ++ PL SKG  GG YSYVD   E G++LYRV  +   N R + CQ G+ V+S+G+ L+   ++     L VG + A  + +P++
Sbjct:   40 TSLRMSDVDTEEAEIMADAEKIAKTKRSNMFNENGVAYAPWMVNQVDEDAVNIARAMRKDKKRVERLAMLEKQGTVNILDAATSELSGIGLKAKCVDDGEVELLWGTNDEEDNKGFVVEKKLVGR--SEWEEVASYSSWSPLKSKGTLGGAYSYVDVTAEEGEWLYRVVAEQVDNTRAITCQVGISVESAGQALQTKIIVGAAAVLGVGFLAAGALLDPIR 258          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|545710446|ref|XP_005707531.1| (hypothetical protein Gasu_17720 [Galdieria sulphuraria] >gi|452824005|gb|EME31011.1| hypothetical protein Gasu_17720 [Galdieria sulphuraria])

HSP 1 Score: 116.701 bits (291), Expect = 2.163e-27
Identity = 65/189 (34.39%), Postives = 108/189 (57.14%), Query Frame = 0
Query:   73 RGMLNAEGKPYAPWMMDQIDLEASARAIRARKRREREQASAVDTGDVFDPQGKE-ASVGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPL 260
            + +  A+G PYAPW++ ++      R + +RK+       A D      PQ +E A VGLK R++ D +VEL W T +E++NIG+++ R+R      +F+ +A +KT P L SKG  GG YS++D    PG ++YR++D + + +   LCQ+ VE+ S+ +K R    + +   LV+   V   + +PL
Sbjct:  130 KSLYRADGTPYAPWLIGKV--MEDPRPLTSRKKPSASGRLAAD------PQLQEIAGVGLKARILGD-EVELVWSTDKEENNIGFVVQRRRGGT--EDFQVIADYKTDPSLKSKGSSGGNYSFIDSSASPGTWIYRISDVNAQGETNDLCQTLVEISSNEDKQRQKLAVIILSGLVIILFVVGLLLDPL 307          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|223998328|ref|XP_002288837.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975945|gb|EED94273.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 111.694 bits (278), Expect = 4.341e-26
Identity = 70/176 (39.77%), Postives = 101/176 (57.39%), Query Frame = 0
Query:   65 QEEI--ERKMRGMLNAEGKPYAPWMMDQIDLEASARAI---RARKRREREQASAVDTGDVF-DPQGKEAS-VGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEK 233
            Q+EI   ++M  + N  G  YAPWM    D E   RA+   R   RR RE  +   TG++F D Q +E S  GL Y++I D +VEL W T  E D  G+I+ R+ A     +++ +AS+K + PL SKG EGG Y Y+D    PG ++YRV+++D    +  +CQ  VEVQ+  E+
Sbjct:   44 QKEISKNKRMSNLRNENGVDYAPWMGISEDDENKIRALMKERTAARRARELQARDVTGNLFRDSQAQELSGTGLSYKII-DGEVELEWATKSEMDTKGFIVKRRAA--KTNDYDVIASYKDWGPLASKGKEGGIYRYLDSTATPGGWVYRVSEEDSMGNQADICQCLVEVQTEDEQ 216          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|1210520160|dbj|GAX21043.1| (hypothetical protein FisN_1Lh285 [Fistulifera solaris])

HSP 1 Score: 110.923 bits (276), Expect = 9.662e-26
Identity = 79/205 (38.54%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   64 IQEEIER--KMRGMLNAEGKPYAPWMMDQIDLEASARAI---RARKRRER-EQASAVDTGDVFDPQGKEAS-VGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ 261
            +Q+E+++  +M  + N  G  YAPWM    + E   R +   +A  RR+R EQ + V    + D   +E S  GLKY+VI D  VEL W TGEE +  G+I+ R+ A     +FE +AS+  + PL SKG  GG Y ++D  +EPG ++YRVT++DK      L Q  VE+Q++ E++        FG L V  VVA  + +PLQ
Sbjct:   53 VQQELKKTKRMSNLRNERGIEYAPWMKITAEDEKEIRKVMRDKAEARRKRKEQETQVQGSLLRDSAFQELSGTGLKYKVI-DGAVELEWTTGEESNTQGFIVKRRPAKTE--KFEVLASYANYGPLQSKGSSGGVYRFLDDQVEPGGWVYRVTEKDKNGSENDLSQCLVEIQTNEEQMATKVAAIGFGVLAVAAVVAGALIDPLQ 254          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|1210529206|dbj|GAX12352.1| (hypothetical protein FisN_1Hh285 [Fistulifera solaris])

HSP 1 Score: 110.923 bits (276), Expect = 1.180e-25
Identity = 79/205 (38.54%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   64 IQEEIER--KMRGMLNAEGKPYAPWMMDQIDLEASARAI---RARKRRER-EQASAVDTGDVFDPQGKEAS-VGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVLALFGALVVGGVVASFVYEPLQ 261
            +Q+E+++  +M  + N  G  YAPWM    + E   R +   +A  RR+R EQ + V    + D   +E S  GLKY+VI D  VEL W TGEE +  G+I+ R+ A     +FE +AS+  + PL SKG  GG Y ++D  +EPG ++YRVT++DK      L Q  VE+Q++ E++        FG L V  VVA  + +PLQ
Sbjct:   53 VQQELKKTKRMSNLRNERGIEYAPWMKITAEDEKEIRKVMRDKAEARRKRKEQETQVQGSLLRDSAFQELSGTGLKYKVI-DGAVELEWTTGEESNTQGFIVKRRPAKTE--KFEVLASYANYGPLQSKGSSGGVYRFLDDQVEPGGWVYRVTEKDKNGSENDLSQCLVEIQTNEEQMATKVAAIGFGVLAVAAVVAGALIDPLQ 254          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|544214549|ref|XP_005537421.1| (hypothetical protein CYME_CMN316C [Cyanidioschyzon merolae strain 10D] >gi|449017983|dbj|BAM81385.1| hypothetical protein CYME_CMN316C [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 105.145 bits (261), Expect = 3.390e-23
Identity = 71/192 (36.98%), Postives = 107/192 (55.73%), Query Frame = 0
Query:   75 MLNAEGKPYAPWMMDQIDLEASARAIRARKRREREQASAVDTGDVF--DPQGKE-ASVGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFP-PLNSKGPEGGFYSYVDQGLEP-GQYLYRVTDQDKKNKRTLLCQSGVEVQSSGEKLRNTAVL-ALFGALVVGGVVASFVYEPL 260
            +   +G PYAPWM+  ++ E S         +E+  AS  D       DPQ +E A +GL+ R+++DRDVEL W T  E +N G+ + R+R      ++E +A +K+ P  L SKG +GG Y ++D   E  G ++YRV+D D   + + L Q  VE +S  E+ R   VL AL G L++ G V S + +PL
Sbjct:  116 LYRPDGTPYAPWMIGLVEEEPS---------KEKGLASRTDARGRLAGDPQAQEIAGIGLRARIVDDRDVELLWRTEGETNNAGFQVSRRRGKS--TDWEVIADYKSAPDTLRSKGAQGGAYRFIDTPPEATGTWVYRVSDIDNSGEVSDLSQILVEFESEAERKRQLLVLAALIGTLLLIGTVTSML-DPL 295          
BLAST of EWM22043.1 vs. NCBI_GenBank
Match: gi|397615960|gb|EJK63740.1| (hypothetical protein THAOC_15587 [Thalassiosira oceanica])

HSP 1 Score: 97.0561 bits (240), Expect = 4.919e-20
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = 0
Query:   22 PSLPRSSLTSKISGLTFTSKVGDKCALSVKLTKEEEEQEEREIQEEIERKMRGMLNAE-GKPYAPWMMDQIDLEASARAI---RARKRREREQASAVDTGDVF-DPQGKEAS-VGLKYRVINDRDVELGWLTGEEKDNIGYIIFRKRADEPGAEFEEVASFKTFPPLNSKGPEGGFYSYVDQGLEPGQYLYRVTDQDKKNKRTLLCQS 223
            P  P S++ +    L   ++V  + A    L+ EEE +     +    +K   + NA  G  YAPWM      E   R +   R   RR+R++ +   TG++F D Q +E S  GL Y++  D DVEL W T  E++  G+ I R+RA     EF  + S++ + PL SKG EGG Y Y+D    PG ++YR+T++D       +CQ+
Sbjct:   71 PVEPVSTVDTVAEALADAARVEAENAKLDALSTEEEIELMVANEMSKTKKASKLKNAAAGVEYAPWMRISEADEEKIRVVMKERTEARRKRQEQARDVTGNLFRDSQAQELSGTGLTYKLF-DGDVELSWATKSERNTKGFTIKRRRAKTD--EFTTLVSYEDYGPLASKGDEGGIYKYLDTTAGPGGWVYRITEEDTFGGSADICQA 275          
The following BLAST results are available for this feature:
BLAST of EWM22043.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102458|gb|EWM22043.1|0.000e+0100.00hypothetical protein Naga_100052g8 [Nannochloropsi... [more]
gi|298706051|emb|CBJ29161.1|5.156e-3535.22conserved unknown protein [Ectocarpus siliculosus][more]
gi|922856441|gb|KOO24795.1|1.110e-3234.27peptidase s8 s53 subtilisin kexin sedolisin [Chrys... [more]
gi|676382027|ref|XP_009034292.1|1.382e-3236.65hypothetical protein AURANDRAFT_62132 [Aureococcus... [more]
gi|545710446|ref|XP_005707531.1|2.163e-2734.39hypothetical protein Gasu_17720 [Galdieria sulphur... [more]
gi|223998328|ref|XP_002288837.1|4.341e-2639.77predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210520160|dbj|GAX21043.1|9.662e-2638.54hypothetical protein FisN_1Lh285 [Fistulifera sola... [more]
gi|1210529206|dbj|GAX12352.1|1.180e-2538.54hypothetical protein FisN_1Hh285 [Fistulifera sola... [more]
gi|544214549|ref|XP_005537421.1|3.390e-2336.98hypothetical protein CYME_CMN316C [Cyanidioschyzon... [more]
gi|397615960|gb|EJK63740.1|4.919e-2033.65hypothetical protein THAOC_15587 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8644rna8644Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications