|
|
Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF81 |
| Orig transcript id | gnl|cribi|Naga_100052g3.1159.mrna |
| Orig protein id | gnl|cribi|Naga_100052g3.1159 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:486595..488649 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8640 ID=rna8640|Name=rna8640|organism=Nannochloropsis gaditana|type=mRNA|length=1302bp
AGACAAATTTCCTAGAATCACGTTTGAAAATGAAATATGCGTCGCCACTT
TTAATCCTCAGCAGTAAAAGGGGCAGTAAATATTACGCTTTCCCCTCGCC
CAGCAGACAGAAGCGGAAGGGCCTCGCCTCGATCCCTCCACGCCTTAAAA
TGTGTAATTTCGGATTCATTATCCCTCAAACATACTGACAGATACTCACG
TGCACGGAAGATAAATGAAAATTACATCTGTTGCGGCCGTCCTTGTGACA
ATGGGTCCGGCTGCGGTCCATTCGTTTCCTTTGTCTTTTCGTCCCGTCAG
CTCTTTCTCAGGTCCGGCCCTACCACCAGTCACACGGCAATGTCTAGCAA
GAGAGGGGCGTCGGCGGCCTTTTGACGGGCCCCAGCCGCTGCGTTCAGGA
ACATCATCCCATAGCGCCGAAGAAAGAGAAGCCTCCTCACGTGATGACGT
TGATTCTCGCGCGACTCCTGTGCCAAAACCGAAACCCTTCATAAGCCGTC
GCGTGCGCCGCGGGCCCATCGGCGCTGCAACTTCAGGCATTGATGGTGCT
TCGAAATCATCGCGACAAGTAAACGGTAGCACCGCAATACACAACAAATC
AGTGACGCCTACGTCTACTCCTGCCGTCCTCAAAGTGAGTAAAAAATGGG
CGTGCGTGGCCAATTGTGGAGCATGCTGTTACCTTGCCCCTTCCGAGCGC
CCCTACCTCCTTGACTACTTCGACGATCCAAAGGACCTAGCAGCATACAA
CAGCATGGTGGGAGATGACGGATGGTGTATTCATTACGACAAAGCGGCGC
GGGCGTGCACTGTGTTCGAAGATCGGCCCTGGTTCTGTCGCGTGGAGGGC
AAGACGTTCGAGAAGATGTACGGAGTGACGGGGTCGGAAATGGACAAATT
TTGCACGTCTTGTTGTCGGGAGCAGATCGCAGACGTCTACGGCACAACAA
GTGGTGAAATGCTTTCGTTCAACATGGCGATAAAGCACTTGAAAGCTTCG
GCTGGCGACGCCAGAAGCGAGAGGAGTAAGGGGGCGGGTGGCTTTGGCAA
GGGCGCAAGAGCAGTGGACGAGGCCGTGGGGGAGCCTGTAGCCCCTATTG
TGCCCATCGACCCGTTCACAAACGAAGCTTCAGACAAGGAAGCAGCCATG
GCGGATTGGATCGGATCGTGACAGGATGACGGGTGAGGTAATGGAGAAAT
GAATCAAATCGTCGACAGGCTTAAAATATAAATATAAATATATAAATTTT
ATACTTATTTTATGCTTATAAATTGAAAAGTTTAACAATGCTTAGTATTT
GA back to topprotein sequence of rna8640 >rna8640-protein ID=rna8640-protein|Name=rna8640|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
MHLIRIILSLANSQSLAFQPPCQADLCVTHFHLRFHSIRNSHQNFPGVCS
STISEAVYNLTVGGLAAMAVQSALIWREVNWQLVRLLLWPILFGTGLGLV
ALYHVHSLWLKRVLGLVFLSVGAYQIPAEVLRAKGLSGGHDGKQGQVLVE
GEERAGLRRLGRVLGLASGFLAGLFGTGGAPLMILVAATGVEKDEWRASN
AVIWLVDNVFRLLYLQAVQRQISLPDDASRLLLLMLAGGLGVGAGSALSS
FVDVALFRRLLILLMLLGANVMLFAGRPLRTAVVGVCAVSLFFLLYLLAL
WRQPSGPGPWASLLAAAGLAAKSSSVEDWVPQRWVGKSGYSRVATQAEEE
REEGRGGDGNGKPRQGPALENRDDKDARMEHRRKPEIEMMAV back to topmRNA from alignment at KK037249.1:486595..488649- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8640 ID=rna8640|Name=rna8640|organism=Nannochloropsis gaditana|type=mRNA|length=2055bp|location=Sequence derived from alignment at KK037249.1:486595..488649- (Nannochloropsis gaditana)
CGCTTTATCTATCCACCGCATACCATACAGGGACACAAAAGTACTTGTGA
ATTTCGCTGTATCTTTACGCGTCGAGGGGGCTACTAAAGTCTGCGTAGGC
CATCGATGGACAGGGGGGGGCAGGAGGCCGCACGCTTCTTCATCATACTG
TTCGCCAATCTTCCAATGGGGGTTTGCGGTTTTGGAGACGCTGTGGTAAT
GCATATTGCGCTGACGATATGTAGCATGGTAAGCATAAGTAGCATGCGGC
TCCATAAGATATGATGCATGCATTTTCTCGGAAGGAAATATTTCTGAGGG
TCCTCAAACTTCACAGGAAGGGTGGGTATCAGGAGGCATAGGACGTATCT
GGTTCGGACCTCTCTCGTAGCTTTTATATCTTTTTCCGATTTTGTGCGAC
TGAACCGTGTTATTCATGCATCTCATACGTATTATTCTTTCGCTGGCAAA
TTCGCAATCTCTCGCTTTCCAACCTCCGTGTCAAGCTGACCTCTGTGTCA
CCCATTTCCATCTTCGGTTTCATTCCATCCGTAATTCTCACCAGAACTTT
CCCGGCGTGTGCTCCTCCACGATCTCGGAAGCGGTTTACAATCTTACCGT
CGGGGGCCTTGCTGCCATGGCTGTGCAAAGCGCCTTGATATGGCGGGAGG
TTAACTGGCAGGTAAGGGAAGGTGAGAGGCCGGCATGGAGGACGGGGAGG
ACCGCGCTTGCCCTCGCTGATTCCCCTCCCCCAACTATCAGCTTGTTCGC
CTCCTTCTTTGGCCTATTCTTTTCGGCACCGGTCTGGGCTTGGTTGCTCT
CTATCACGTCCACTCCCTCTGGCTCAAGCGGGTGCTGGGCCTCGTCTTCC
TGTCGGTCGGGGCCTACCAGATCCCTGCAGAGGTGCTCCGCGCCAAGGGG
CTGTCGGGGGGGCACGATGGTAAACAGGGGCAGGTGCTAGTGGAAGGGGA
GGAGAGGGCGGGGCTGCGACGATTGGGGAGGGTGTTGGGACTTGCCTCGG
GGTTTTTAGCAGGACTTTTTGGGACGGGGGGGGCGCCTCTGATGATCCTG
GTGGCGGCGACGGGGGTAGAGAAAGACGAGTGGCGCGCGAGCAATGCCGT
GATATGGCTGGTGGATAATGTCTTCCGCTTATTGTACTTGCAGGCTGTGC
AAAGGCAGGTGCGTGCTTTGATGGAGGGGGGGAAGAGGGTGTAGGTCGGT
TTTGTGAAAAGGGCGCGAAAAGGGTTTCATCGACCATGGCCACGGTCTCG
CCGCTTTATCTCTGCTCAATAGCTGGCACTCAATGTCTGTAACCACCCAT
GGCCAGATATCCCTCCCCGATGACGCCTCTCGGCTTCTCCTTCTCATGTT
GGCCGGGGGCCTGGGGGTCGGGGCGGGCTCTGCCCTCTCTTCCTTCGTGG
ATGTGGCACTGTTCCGGCGCCTCCTCATCCTGCTCATGCTCCTTGGTGCC
AACGTGATGCTCTTCGCGGGCAGACCCTTGCGAACAGCCGTGGTCGGCGT
GTGTGCCGTCTCTCTCTTCTTCCTCCTCTACCTGCTCGCTCTCTGGCGTC
AACCCTCAGGCCCCGGCCCCTGGGCGTCCTTGTTGGCTGCCGCGGGGCTG
GCTGCAAAGAGCTCGAGCGTGGAAGATTGGGTCCCGCAGCGATGGGTGGG
TAAATCGGGCTATAGCAGGGTGGCGACACAAGCGGAGGAGGAGCGAGAGG
AGGGCCGAGGCGGAGACGGGAACGGAAAGCCGCGTCAGGGACCGGCTTTG
GAGAATAGAGATGACAAGGACGCCAGGATGGAGCACAGAAGAAAACCGGA
GATCGAGATGATGGCCGTGTGACGTGGACGTCTCTTAAGACCCAAGCGGG
CTCTTGGAGAGGGTCTGTGGGAGGCTGTCATGCGGACCGCGATCGGGTAT
GGCAAAATGGGCAAAGTACCTGTGCAAAGGAACGACAAATGAATAAATAA
AGCTCGAAAGCAATTTTTGAAAGCGAGTGAATCCAAATCAAATACTAAGC
ATTGTTAAACTTTTCAATTTATAAGCATAAAATAAGTATAAAATTTATAT
ATTTA back to topCoding sequence (CDS) from alignment at KK037249.1:486595..488649- >rna8640 ID=rna8640|Name=rna8640|organism=Nannochloropsis gaditana|type=CDS|length=3537bp|location=Sequence derived from alignment at KK037249.1:486595..488649- (Nannochloropsis gaditana)
ATATCCCTCCCCGATGACGCCTCTCGGCTTCTCCTTCTCATGTTGGCCGG
GGGCCTGGGGGTCGGGGCGGGCTCTGCCCTCTCTTCCTTCGTGGATGTGG
CACTGTTCCGGCGCCTCCTCATCCTGCTCATGCTCCTTGGTGCCAACGTG
ATGCTCTTCGCGGGCAGACCCTTGCGAACAGCCGTGGTCGGCGTGTGTGC
CGTCTCTCTCTTCTTCCTCCTCTACCTGCTCGCTCTCTGGCGTCAACCCT
CAGGCCCCGGCCCCTGGGCGTCCTTGTTGGCTGCCGCGGGGCTGGCTGCA
AAGAGCTCGAGCGTGGAAGATTGGGTCCCGCAGCGATGGGTGGGTAAATC
GGGCTATAGCAGGGTGGCGACACAAGCGGAGGAGGAGCGAGAGGAGGGCC
GAGGCGGAGACGGGAACGGAAAGCCGCGTCAGGGACCGGCTTTGGAGAAT
AGAGATGACAAGGACGCCAGGATGGAGCACAGAAGAAAACCGGAGATCGA
GATGATGGCCGTGTGACTTGTTCGCCTCCTTCTTTGGCCTATTCTTTTCG
GCACCGGTCTGGGCTTGGTTGCTCTCTATCACGTCCACTCCCTCTGGCTC
AAGCGGGTGCTGGGCCTCGTCTTCCTGTCGGTCGGGGCCTACCAGATCCC
TGCAGAGGTGCTCCGCGCCAAGGGGCTGTCGGGGGGGCACGATGGTAAAC
AGGGGCAGGTGCTAGTGGAAGGGGAGGAGAGGGCGGGGCTGCGACGATTG
GGGAGGGTGTTGGGACTTGCCTCGGGGTTTTTAGCAGGACTTTTTGGGAC
GGGGGGGGCGCCTCTGATGATCCTGGTGGCGGCGACGGGGGTAGAGAAAG
ACGAGTGGCGCGCGAGCAATGCCGTGATATGGCTGGTGGATAATGTCTTC
CGCTTATTGTACTTGCAGGCTGTGCAAAGGCAGATGCATCTCATACGTAT
TATTCTTTCGCTGGCAAATTCGCAATCTCTCGCTTTCCAACCTCCGTGTC
AAGCTGACCTCTGTGTCACCCATTTCCATCTTCGGTTTCATTCCATCCGT
AATTCTCACCAGAACTTTCCCGGCGTGTGCTCCTCCACGATCTCGGAAGC
GGTTTACAATCTTACCGTCGGGGGCCTTGCTGCCATGGCTGTGCAAAGCG
CCTTGATATGGCGGGAGGTTAACTGGCAGATATCCCTCCCCGATGACGCC
TCTCGGCTTCTCCTTCTCATGTTGGCCGGGGGCCTGGGGGTCGGGGCGGG
CTCTGCCCTCTCTTCCTTCGTGGATGTGGCACTGTTCCGGCGCCTCCTCA
TCCTGCTCATGCTCCTTGGTGCCAACGTGATGCTCTTCGCGGGCAGACCC
TTGCGAACAGCCGTGGTCGGCGTGTGTGCCGTCTCTCTCTTCTTCCTCCT
CTACCTGCTCGCTCTCTGGCGTCAACCCTCAGGCCCCGGCCCCTGGGCGT
CCTTGTTGGCTGCCGCGGGGCTGGCTGCAAAGAGCTCGAGCGTGGAAGAT
TGGGTCCCGCAGCGATGGGTGGGTAAATCGGGCTATAGCAGGGTGGCGAC
ACAAGCGGAGGAGGAGCGAGAGGAGGGCCGAGGCGGAGACGGGAACGGAA
AGCCGCGTCAGGGACCGGCTTTGGAGAATAGAGATGACAAGGACGCCAGG
ATGGAGCACAGAAGAAAACCGGAGATCGAGATGATGGCCGTGTGACTTGT
TCGCCTCCTTCTTTGGCCTATTCTTTTCGGCACCGGTCTGGGCTTGGTTG
CTCTCTATCACGTCCACTCCCTCTGGCTCAAGCGGGTGCTGGGCCTCGTC
TTCCTGTCGGTCGGGGCCTACCAGATCCCTGCAGAGGTGCTCCGCGCCAA
GGGGCTGTCGGGGGGGCACGATGGTAAACAGGGGCAGGTGCTAGTGGAAG
GGGAGGAGAGGGCGGGGCTGCGACGATTGGGGAGGGTGTTGGGACTTGCC
TCGGGGTTTTTAGCAGGACTTTTTGGGACGGGGGGGGCGCCTCTGATGAT
CCTGGTGGCGGCGACGGGGGTAGAGAAAGACGAGTGGCGCGCGAGCAATG
CCGTGATATGGCTGGTGGATAATGTCTTCCGCTTATTGTACTTGCAGGCT
GTGCAAAGGCAGATGCATCTCATACGTATTATTCTTTCGCTGGCAAATTC
GCAATCTCTCGCTTTCCAACCTCCGTGTCAAGCTGACCTCTGTGTCACCC
ATTTCCATCTTCGGTTTCATTCCATCCGTAATTCTCACCAGAACTTTCCC
GGCGTGTGCTCCTCCACGATCTCGGAAGCGGTTTACAATCTTACCGTCGG
GGGCCTTGCTGCCATGGCTGTGCAAAGCGCCTTGATATGGCGGGAGGTTA
ACTGGCAGATATCCCTCCCCGATGACGCCTCTCGGCTTCTCCTTCTCATG
TTGGCCGGGGGCCTGGGGGTCGGGGCGGGCTCTGCCCTCTCTTCCTTCGT
GGATGTGGCACTGTTCCGGCGCCTCCTCATCCTGCTCATGCTCCTTGGTG
CCAACGTGATGCTCTTCGCGGGCAGACCCTTGCGAACAGCCGTGGTCGGC
GTGTGTGCCGTCTCTCTCTTCTTCCTCCTCTACCTGCTCGCTCTCTGGCG
TCAACCCTCAGGCCCCGGCCCCTGGGCGTCCTTGTTGGCTGCCGCGGGGC
TGGCTGCAAAGAGCTCGAGCGTGGAAGATTGGGTCCCGCAGCGATGGGTG
GGTAAATCGGGCTATAGCAGGGTGGCGACACAAGCGGAGGAGGAGCGAGA
GGAGGGCCGAGGCGGAGACGGGAACGGAAAGCCGCGTCAGGGACCGGCTT
TGGAGAATAGAGATGACAAGGACGCCAGGATGGAGCACAGAAGAAAACCG
GAGATCGAGATGATGGCCGTGTGACTTGTTCGCCTCCTTCTTTGGCCTAT
TCTTTTCGGCACCGGTCTGGGCTTGGTTGCTCTCTATCACGTCCACTCCC
TCTGGCTCAAGCGGGTGCTGGGCCTCGTCTTCCTGTCGGTCGGGGCCTAC
CAGATCCCTGCAGAGGTGCTCCGCGCCAAGGGGCTGTCGGGGGGGCACGA
TGGTAAACAGGGGCAGGTGCTAGTGGAAGGGGAGGAGAGGGCGGGGCTGC
GACGATTGGGGAGGGTGTTGGGACTTGCCTCGGGGTTTTTAGCAGGACTT
TTTGGGACGGGGGGGGCGCCTCTGATGATCCTGGTGGCGGCGACGGGGGT
AGAGAAAGACGAGTGGCGCGCGAGCAATGCCGTGATATGGCTGGTGGATA
ATGTCTTCCGCTTATTGTACTTGCAGGCTGTGCAAAGGCAGATGCATCTC
ATACGTATTATTCTTTCGCTGGCAAATTCGCAATCTCTCGCTTTCCAACC
TCCGTGTCAAGCTGACCTCTGTGTCACCCATTTCCATCTTCGGTTTCATT
CCATCCGTAATTCTCACCAGAACTTTCCCGGCGTGTGCTCCTCCACGATC
TCGGAAGCGGTTTACAATCTTACCGTCGGGGGCCTTGCTGCCATGGCTGT
GCAAAGCGCCTTGATATGGCGGGAGGTTAACTGGCAG back to top
|