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Properties
| Property Name | Value |
|---|
| Product | fgd6 protein |
| Orig transcript id | gnl|cribi|Naga_100244g10.1334.mrna |
| Orig protein id | gnl|cribi|Naga_100244g10.1334 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:479145..481146 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8636 ID=rna8636|Name=rna8636|organism=Nannochloropsis gaditana|type=mRNA|length=1323bp
AAGACGCTCGCCAAGTTTTCCACGCTTTTGTTGACGTCTCCACACTCTTA
TTTTCCTTGTATAGAATGCAATCAAAGCTAAAGCTTGGACAGGAAGACTG
GTGACACTTATGTCACAGTCCCGACGGGCCTCCTGCCTGAGTGTCGCCCG
GACAGACACGACGTTTTCGATACGCCTTCTGACCCCTGCAGCTTTTTCCT
CAACTCTTCGAGTCGTTAAGGAGAGTCTCGACTTGAAATGACAAAGTACC
CCGATAGAGAGTGGCGATTCTCTCAAGAAGACTGGCTCAAGGCCAGTAGG
TTGACCGCGGGTGGAGTTACCTTCCTTCTCACTCTCTCCGCCTCGCAGTT
CTTGCAAGGGCGGCTTCTGGGCATTTCAGCTGCTTCTCGAGCCGCTACCC
TTGCGGGCATGCTTTCAGTGAGCACTGGGTCGATGCTGGCATCATGGGCA
GCGGATGAAGCTCCGGCGACCCTGAGCGTAGCGCTAGGATGGGTACCGGA
AAAGGACCGAAGGAGAAAAGGAGGTGTAATCGACAAGCGCGGGACCATTT
CAAGCTCGACATTTTCCCTCTTGGGATACGACGCTGGAAAGAAGAAGGAA
CGGTTGCTTGGGGCTGCGCGCACAGCCTTGGTGGGCATGCTGCTATTCAA
GGGTCTTGGAGGGCGGTTCAGCGGCGTCGCACCGAGTAACGTGGCACAAC
CGGGCGCCTTCTTTAACGTCCGTGGCACCCTCCCTGCAGGACTGGAGTAC
GCGAGTCCCAAACAGAAACGGCGGTTGGATATGTTTGGGTGGGTGTACGG
CTGCCATACGTGCGGCAGGCGTCAAATGGGAGACTACGTGGGGGACCACA
TGCCGCCAAGGAAGGTGGCAGTGGAGATGAGCCGTCGCTGGTGGCGGCGG
CTCTTGGGCATTCGAGTCAAGCAGCGCTTCACGCCCCAGTGTCGCCCATG
CTCCAGCATTCAGAGCGCAGCAGTACGCAGCGATCGACGCATTCTGGTGT
ATCACTATCTCTCCCTCCGGCGGTACCACGCGACAGGCGCGGTTTTAGAA
GTGGTCTCCCTTCTGCCCGGCCATGGCATGCTGGATGGACTGATACATCA
AAATGTGGGGCGGGTAAGCACCTGGTGGCGACGTAAGGGGCGTGCGGAGG
GAGACTGGCAGTGACGGTGATAATGAGTGGTAAAGGGGCCTGACTCTCTG
ACATGGCGCGGATACCCCGGTCTAGGATGAGTTTGAAGTCAAAAAACGCA
ATCAAAAGGTGTGAAAATAACGTATGACTGTTGCTGATTGTAGAAGAAAT
TCAAACCGACAGTTTAATGCTTG back to topprotein sequence of rna8636 >rna8636-protein ID=rna8636-protein|Name=rna8636|organism=Nannochloropsis gaditana|type=polypeptide|length=298bp
MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNA
KSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDV
EWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLR
GLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNE
MTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGK
KKKQRSKDKTFSTAGIGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR back to topmRNA from alignment at KK037249.1:479145..481146- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8636 ID=rna8636|Name=rna8636|organism=Nannochloropsis gaditana|type=mRNA|length=2002bp|location=Sequence derived from alignment at KK037249.1:479145..481146- (Nannochloropsis gaditana)
GCGCCGCATATATTGTGCAAAGGAGGCACCAAAGGCATGGCCCATACTTC
GTGTACAATTTGAACCTATCGACCGTTCAACCGTATCCCTGCACGCCCTG
ATTCGTCCCGCGCTGAGGCCGTTGAAGCGTTCCTCCATCTGGAATCAAGA
GCCTTGCAATAAACGGCCACTTTTCCAATTTGCTTCCGCTTTGTGTGGCT
TTGGCCTTGTGCTCGATGTCCATGTCGTCGCTTTAGTCACTTCTGCGTGC
TCACATGTTTCACGAACGCCTTTTCACAAGATTGACTGCAGATCTACCTT
CCTAAAGCTAATAATAACAATGGAGAGAAGCCCCAACGGACGCGTGCCTC
TGAGCTGGAGACATGTACAACAATTTGAGACGAGATCCCCGAAAAGCATA
CAAGCCGCCCTACTACGAGGAGAGGATACGCTCTCCACGCACTCCGTGGC
GAGTCGCCTTTCCAACGCAAAAAGCTCTTACTCCGCTACCACGTTCCAGA
GCTTCGCCACATCCAATTACTCCGGGTTCTCTGCAGCAGGTGATTTGAGC
AGGAAGATGAAAAATAAAAAACATCACGTGCATCCGAGCGAGCTAGACCC
TACCGTGGCTTATGACGTAGAGTGGGTACACGACGAATTGGCTCTATCCT
GTATGGTGTGCATGGCCGAATTCTCCCCTCTAATGCGCCGAAAGCACCAC
TGCCGCGCCTGCGGGCGTGTGGTGTGCTCAGGATGCTCCAGTGCCCGTGT
CCTGGTTCTAGGTCTGCGAGGCCTCCAAAAGGCCTGCACGGATTGTGTGC
GCGGAGCGGAGAAATTGAGGGCCTGTGAGAGCATCAGCGAGGACTCCGAG
GGAGGTGTCCGGCTGACAGAAGAGCAGGAGGAAAACGACGCTACCATGGA
AGGCTTGAAAAAGAACGAGATGACGAGGGAAACGGAACGCAGCCCGGGCC
GCGTGTGTGGCAGCAACAGCTCGACCCACGTGGAACGCAAAGTAGAAGGC
GACAAACAGGAGGAGCGACAGCAGGCTCTAGAAAATGACGACGAGCCCTT
CCCGCAACAAGCGGGCAAGAAGAAAAAGCAGCGATCAAAAGACAAGACTT
TCTCCACGGCGGGCATCGGTCTCCTGGCCGTGGGGTGCACAGCCCTGGCG
ATAGGCTCAGCACTAGCTATGAGCCCCAAACTGCTCTCCGGTATCATGGG
CCGCTTTAAGAGATAAAGGCAAACAACAGGGCCAGAGGCTACCTGCGAAA
GAAACACAGCGAAAGTAAAAAGAAGGATGGATGGAGAAGGGGGAGGGAGA
GGGAGGGAAAAAGAGTCGGGAAGAACGTTGGTGAAGGCGCGGTTGCCTCC
AAATTGCGTATACTTGTCTTTTTAGAAGAAATGAAATGACAACTTGGCGC
GTTCAGTACATGTCTGTAATTTCATATTTAGAGATGTCGCAGAATCGGCG
GTCTGTCCGTAGATGCACTCACTGGGACATGCAGCCTCCTGGAGATACCA
TAACGACATTTAAAATGAGAGATGCTTTTCTACGGGTGACAATCGCGGCT
GACATGATGCGAAAAGAAGAGGAGGCGGAGAAACAGACTAGTTCTCGCAA
AGAAATCCAGGATTGCGCAGCAAATGTGGCCTGAGGGACCCACTTTGCAT
GGACCGGGGCGTCATAAGCCCCGAGGCCCCGCCTGGATTGTCCTCATTGT
AGGACCAACAAATAAATCGTCACCCGTGCGAGTACGTGTTCAGATGACTC
GACATCAGATTCACCCCAACGCTGGGTACGAGAGACGATGAACATGCCTA
CAACAAATGGGCCATTTCGGATACCAAAGCATAAATTCGTGCAGAGAGCT
TGTGCATAATTGAAGCGAGGAGAGAAAAGATGGGAAAGATTACGATTGGA
AAAGGAAATCCAAGGTACACTATGTCAAGGTGCTGGGCCGGTGAAAAGCA
GCCACACAAGCTTTATGCAAAGCAAGCATTAAACTGTCGGTTTGAATTTC
TT back to topCoding sequence (CDS) from alignment at KK037249.1:479145..481146- >rna8636 ID=rna8636|Name=rna8636|organism=Nannochloropsis gaditana|type=CDS|length=897bp|location=Sequence derived from alignment at KK037249.1:479145..481146- (Nannochloropsis gaditana)
ATGGAGAGAAGCCCCAACGGACGCGTGCCTCTGAGCTGGAGACATGTACA
ACAATTTGAGACGAGATCCCCGAAAAGCATACAAGCCGCCCTACTACGAG
GAGAGGATACGCTCTCCACGCACTCCGTGGCGAGTCGCCTTTCCAACGCA
AAAAGCTCTTACTCCGCTACCACGTTCCAGAGCTTCGCCACATCCAATTA
CTCCGGGTTCTCTGCAGCAGGTGATTTGAGCAGGAAGATGAAAAATAAAA
AACATCACGTGCATCCGAGCGAGCTAGACCCTACCGTGGCTTATGACGTA
GAGTGGGTACACGACGAATTGGCTCTATCCTGTATGGTGTGCATGGCCGA
ATTCTCCCCTCTAATGCGCCGAAAGCACCACTGCCGCGCCTGCGGGCGTG
TGGTGTGCTCAGGATGCTCCAGTGCCCGTGTCCTGGTTCTAGGTCTGCGA
GGCCTCCAAAAGGCCTGCACGGATTGTGTGCGCGGAGCGGAGAAATTGAG
GGCCTGTGAGAGCATCAGCGAGGACTCCGAGGGAGGTGTCCGGCTGACAG
AAGAGCAGGAGGAAAACGACGCTACCATGGAAGGCTTGAAAAAGAACGAG
ATGACGAGGGAAACGGAACGCAGCCCGGGCCGCGTGTGTGGCAGCAACAG
CTCGACCCACGTGGAACGCAAAGTAGAAGGCGACAAACAGGAGGAGCGAC
AGCAGGCTCTAGAAAATGACGACGAGCCCTTCCCGCAACAAGCGGGCAAG
AAGAAAAAGCAGCGATCAAAAGACAAGACTTTCTCCACGGCGGGCATCGG
TCTCCTGGCCGTGGGGTGCACAGCCCTGGCGATAGGCTCAGCACTAGCTA
TGAGCCCCAAACTGCTCTCCGGTATCATGGGCCGCTTTAAGAGATAA back to top
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