EWM22069.1, cds8609 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|585102485|gb|EWM22069.1| (fgd6 protein [Nannochloropsis gaditana]) HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 Query: 1 MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNAKSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNEMTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGKKKKQRSKDKTFSTAGIGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR 298 MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNAKSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNEMTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGKKKKQRSKDKTFSTAGIGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR Sbjct: 1 MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNAKSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNEMTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGKKKKQRSKDKTFSTAGIGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR 298
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|553186092|ref|XP_005854358.1| (fgd6 protein [Nannochloropsis gaditana CCMP526] >gi|422294698|gb|EKU21998.1| fgd6 protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0 Query: 1 MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNAKSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNEMTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGKKKKQRSKDKTFSTAGIGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR 298 MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNAKSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNEMTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGKKKKQRSKDKTFSTA IGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR Sbjct: 1 MERSPNGRVPLSWRHVQQFETRSPKSIQAALLRGEDTLSTHSVASRLSNAKSSYSATTFQSFATSNYSGFSAAGDLSRKMKNKKHHVHPSELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEENDATMEGLKKNEMTRETERSPGRVCGSNSSTHVERKVEGDKQEERQQALENDDEPFPQQAGKKKKQRSKDKTFSTASIGLLAVGCTALAIGSALAMSPKLLSGIMGRFKR 298
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|1173957723|gb|OQS04200.1| (hypothetical protein THRCLA_20943 [Thraustotheca clavata]) HSP 1 Score: 80.4925 bits (197), Expect = 1.162e-13 Identity = 35/71 (49.30%), Postives = 42/71 (59.15%), Query Frame = 0 Query: 90 SELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCV 160 +E +P Y+V WVHD L C VC FS RR HHCR+CG +VCS CS R V GL L + C DC+ Sbjct: 110 AERNPLETYNVTWVHDVDVLDCSVCHTRFSFFFRR-HHCRSCGSIVCSNCSQTRKPVYGLINLHRVCDDCI 179
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|1173930913|gb|OQR83506.1| (hypothetical protein ACHHYP_14610 [Achlya hypogyna]) HSP 1 Score: 76.6406 bits (187), Expect = 5.328e-13 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0 Query: 90 SELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCV 160 +E +P YDV WVHD +CMVC +F+ L R+HHCR+CG VVCS C+ +R V GL + C +C+ Sbjct: 107 AERNPLETYDVTWVHDYDVQACMVCQLQFN-LFFRRHHCRSCGNVVCSRCAKSRRAVYGLLNQHRVCDECL 176
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|1032647487|gb|OAQ28787.1| (hypothetical protein K457DRAFT_126461 [Mortierella elongata AG-77]) HSP 1 Score: 77.411 bits (189), Expect = 3.848e-12 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 0 Query: 102 WVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRG--LQKACTDCV 160 WV D+ A CM+C EF L RRKHHCRACG+VVC CSS +L+ G + +AC DC+ Sbjct: 984 WVPDQSATRCMICSEEFGTLFRRKHHCRACGKVVCHSCSSRTILIKGAHSEKVGRACDDCI 1044
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|669149520|ref|XP_008610322.1| (hypothetical protein SDRG_06324 [Saprolegnia diclina VS20] >gi|530737974|gb|EQC36216.1| hypothetical protein SDRG_06324 [Saprolegnia diclina VS20]) HSP 1 Score: 75.8702 bits (185), Expect = 5.011e-12 Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0 Query: 90 SELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRACESISEDSEGGVRLTEEQEEND 190 +E +P +YDV WVHD +CMVC F R+HHCR+CG VVCS C+ +R V GL + C +CV + + D G++L ++ N+ Sbjct: 123 AERNPLESYDVTWVHDYDVAACMVCQTSFG-FFFRRHHCRSCGNVVCSHCAKSRRPVYGLLHAHRVCDECV-----VNGVWTDPRDVRAGLQLKQDAARNE 217
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|673031632|ref|XP_008869777.1| (hypothetical protein, variant 4 [Aphanomyces invadans] >gi|574474928|gb|ETW01929.1| hypothetical protein, variant 4 [Aphanomyces invadans]) HSP 1 Score: 73.9442 bits (180), Expect = 1.582e-11 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0 Query: 98 YDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKLRA--CESISEDSEGGVRL 182 Y V WV D+ + CM+C F + R+HHCR+CG +VCS CS AR V GL GL + C C+ ++ SI +D+ G R+ Sbjct: 133 YTVWWVDDDALVGCMICHVPFG-MYFRRHHCRSCGDIVCSDCSKARKDVYGLDGLHRVCDACMVDGTWVQPQRQRSIVDDAAGDDRV 218
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|669149524|ref|XP_008610324.1| (hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530737976|gb|EQC36218.1| hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 72.4034 bits (176), Expect = 3.077e-11 Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 91 ELDPTVAYDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCVRGAEKL-----RACESISEDSEG 178 +L P AY V+WV DE +C +C F +RR HHCR CG +VC+ C+ AR V GL GL++ C C+ + RA E + +D +G Sbjct: 10 DLKPGEAYAVDWVRDEDVHACALCATAFGFFVRR-HHCRGCGHIVCAECAVARREVYGLLGLERVCDACLSNGVWVDPVARRALEKLEQDEDG 101
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|1183485358|gb|ORZ09102.1| (hypothetical protein BCR41DRAFT_398970 [Lobosporangium transversale]) HSP 1 Score: 73.9442 bits (180), Expect = 4.854e-11 Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 102 WVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRG--LQKACTDCV 160 WV D A CM+C EF L RRKHHCRACG+VVC CSS +L+ + +AC DC+ Sbjct: 1026 WVPDHSATRCMICSEEFGTLFRRKHHCRACGKVVCHSCSSRNILIRSGNSEKVGRACDDCI 1086
BLAST of EWM22069.1 vs. NCBI_GenBank
Match: gi|673031634|ref|XP_008869778.1| (hypothetical protein, variant 5 [Aphanomyces invadans] >gi|673031636|ref|XP_008869779.1| hypothetical protein, variant 6 [Aphanomyces invadans] >gi|574474929|gb|ETW01930.1| hypothetical protein, variant 5 [Aphanomyces invadans] >gi|574474930|gb|ETW01931.1| hypothetical protein, variant 6 [Aphanomyces invadans]) HSP 1 Score: 72.0182 bits (175), Expect = 5.403e-11 Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 0 Query: 98 YDVEWVHDELALSCMVCMAEFSPLMRRKHHCRACGRVVCSGCSSARVLVLGLRGLQKACTDCV 160 Y V WV D+ + CM+C F RR HHCR+CG +VCS CS AR V GL GL + C C+ Sbjct: 133 YTVWWVDDDALVGCMICHVPFGMYFRR-HHCRSCGDIVCSDCSKARKDVYGLDGLHRVCDACM 194 The following BLAST results are available for this feature:
BLAST of EWM22069.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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