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Properties
| Property Name | Value |
|---|
| Product | BSD domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100039g16.4428.mrna |
| Orig protein id | gnl|cribi|Naga_100039g16.4428 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:432192..433720 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8616 ID=rna8616|Name=rna8616|organism=Nannochloropsis gaditana|type=mRNA|length=855bp
ATGCGTACAGTTATACCGTTGTTGGCAACCGTGATGCTAGCGGTCGCTGG
AGAGGCCTTCATCGCCCCCACTGCCCGGCTTCCTCGCGCGCCACGAGCTG
ATGCCCGAAAGACTCTTATGATGTCTTCACCAAATCTCTGGTACCCCGGT
ATGAAATGGGATTCTCGTGGTATGCGTATGGCCCCAGATCAGGAACCGGA
GGTGGACCCGCGACGGAAAGACGAGCCGAAGCCGGAGCGCTTCCCCGTCC
GCCTGCCCGTCATCGAGACGCAGACGGGGCAGATCGACGTGCTCTCCCGG
CTTTTGAAGGATCGGATTCTGCTCCTGGGCCAGCAAGTGGACGACGAGGT
GGCTAACGTATTGGTAGCGCAGCTCTTGTACCTGGCGCAAGAGGATAAGG
AGAAGGATATTACCCTCTACATAAACTCCCCAGGTGGCTCGGTGTCTGCC
GGTTTGGCCATCTATGATGCCATGCAATTCGTCCCATGCGATGTAGCCAC
GGTCTGCTTTGGAATGGCCGCGTCTATGGGGGCTTTTTTATTGGGCGCAG
GGGCCAAGGGGAAGCGGCGGTCGTTGCCCAACGCCCGCATCATGATCCAT
CAACCCCTGGGGGGGGCCCAGGGGCAAGCCGCCGACATTGAGATCCAGGC
CAAAGAGATCCTCTTTGTTCGCTCCTTGCTCAACAGCTACATCAGCGAAT
ACACGGGCCAGCCCATCGATAAGATCCAGGAGGACTGCGATCGGGACTTC
TTCATGACCCCCGAGGAGGCCGTGGCCTACGGGATGATCGACTCCATTGT
CACGACCAAGACGAGCCACGTGCCCAAGCCTACCATGCCGGCCCTCTTCT
GGTAG back to topprotein sequence of rna8616 >rna8616-protein ID=rna8616-protein|Name=rna8616|organism=Nannochloropsis gaditana|type=polypeptide|length=394bp
MWRTFQQDISEFVSVVTGDAKEALSSVLQTPSEHDNTHVMRKSCDKSNTN
LHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEI
ARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESL
LRPQRDFPPPLNLTGGDDEEDLSWGDEDEGVSGKKDNSADRVQAPGTEGN
NTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTKSNRVTH
CDEEREERSDTPSTSTPALEAPPLQAKVEKYETLINGMRKEISSLKSKCT
TLERQCADAIQKEGRVVAQLSGTLTALKQSQDECLQLRKQCQDLKEQQPK
GLVQQENQESVQQMRVPEVKNTIISRDEGSKQDERDYEELESWS back to topmRNA from alignment at KK037249.1:432192..433720+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8616 ID=rna8616|Name=rna8616|organism=Nannochloropsis gaditana|type=mRNA|length=1529bp|location=Sequence derived from alignment at KK037249.1:432192..433720+ (Nannochloropsis gaditana)
GCGTAGCGGTGCATCGAATTTcgccgtggtggtggccttgCGGTCAGAAC
GTATCGGTGCAGTGCCAGCACAGGCGTCTCCGTGCTCGTccccgttctcc
ctcccaacagAGGCTCGGAACGTCTAGGCCCATGTCGCGGTCCCTGAATT
CTTTATCAACACCCCAATTTTGAGCCGCACCATCAATTTACAGGAACAAT
GTGGCGAACTTTCCAGCAAGATATCTCTGAATTTGTAAGCGTTGTAACGG
GCGACGCCAAGGAGGCTCTTTCCTCAGTCCTGCAAACCCCGTCCGAGCAT
GACAACACACACGTCATGAGAAAAAGCTGCGACAAGTCAAATACAAACCT
GCATAGCACCCTATCTGCGCAAGATGAGGACCTATTATCTCTCCAGCGCG
ATCCCAAAACCTATACTGAAGCCATAGctgaggaagacaaggagcgGTGG
CAGATATTTTTGGCTCAGCTACAACTTGACACGAAACAGGACGAAATAGC
CCGGCTGCTGGAGGACCAGGAGCACGTAGCTCGCCTATACAAAGTGCTCA
TTAGCAGCGATCAAAAACATTATGACGGGAACGGCACGGGGAACCAAATT
GACCACGAGACGTTTTGGTCCCGTTATTTTTTCAAGGTGGAGTCTCTCTT
GCGCCCTCAGCGtgatttcccccctcccttgaaCTTGACGGGtggggatg
atgaggaagaccTGTCGTGGGGGGACGAAGATGAGGGCGTcagtgggaag
aaggacaatAGTGCTGACAGGGTCCAAGCGCCAGGAACAGAAGGTAATAA
TACAGAACCACCGGGAGCCTCCAATAGTTCCAGCCCCATGGAGGAGCCAG
ACTTAGATCATGCAGCTTCCTCGTCGCACGCACAAAATGTTGTTGCTGAT
AGTGCCGTGAATGAGAATGGCTTAACAAAAAGCAATCGTGTGACCCACTG
CGACGAAGaacgagaagagagaagTGATACCCCGAGTACGAGTACTCCTG
CACTCGAGGCACCACCTCTCCAAGCAAAAGTTGAAAAGTACGAGACCCTC
ATCAATGgaatgagaaaggaaatTTCGAGTTTGAAAAGCAAATGTACAAC
GTTGGAGAGGCAATGCGCAGACGCCAtccagaaagaagggagggtcgtCG
CACAACTGAGTGGTACCTTAACGGCTCTCAAGCAAAGCCAGGATGAGTGC
TTACAATTACGGAAACAATGTCAAGACCTTAAAGAACAGCAGCCGAAGGG
ATTGGTACAGCAGGAAAATCAGGAGTCAGTGCAGCAGATGCGGGTACCGG
AGGTCAAGAACACGATTATCAGCAGAGATGAAGGAAGCAAGCAGGACGAG
CGAGACTACGAAGAGTTGGAATCTTGGTCTTGACAGCTACTAAAAAACTT
TTACTGTTTTGAGATTTATAGACAAATTGCTACGTCGCATTTCATGCAGT
TAGGATACATTTTCATTCATTTACTCTTATTGTTCAACATATTTACCTCC
CGTGGATATCGCCATTGCCTCTCGACTCC back to topCoding sequence (CDS) from alignment at KK037249.1:432192..433720+ >rna8616 ID=rna8616|Name=rna8616|organism=Nannochloropsis gaditana|type=CDS|length=1185bp|location=Sequence derived from alignment at KK037249.1:432192..433720+ (Nannochloropsis gaditana)
ATGTGGCGAACTTTCCAGCAAGATATCTCTGAATTTGTAAGCGTTGTAAC
GGGCGACGCCAAGGAGGCTCTTTCCTCAGTCCTGCAAACCCCGTCCGAGC
ATGACAACACACACGTCATGAGAAAAAGCTGCGACAAGTCAAATACAAAC
CTGCATAGCACCCTATCTGCGCAAGATGAGGACCTATTATCTCTCCAGCG
CGATCCCAAAACCTATACTGAAGCCATAGctgaggaagacaaggagcgGT
GGCAGATATTTTTGGCTCAGCTACAACTTGACACGAAACAGGACGAAATA
GCCCGGCTGCTGGAGGACCAGGAGCACGTAGCTCGCCTATACAAAGTGCT
CATTAGCAGCGATCAAAAACATTATGACGGGAACGGCACGGGGAACCAAA
TTGACCACGAGACGTTTTGGTCCCGTTATTTTTTCAAGGTGGAGTCTCTC
TTGCGCCCTCAGCGtgatttcccccctcccttgaaCTTGACGGGtgggga
tgatgaggaagaccTGTCGTGGGGGGACGAAGATGAGGGCGTcagtggga
agaaggacaatAGTGCTGACAGGGTCCAAGCGCCAGGAACAGAAGGTAAT
AATACAGAACCACCGGGAGCCTCCAATAGTTCCAGCCCCATGGAGGAGCC
AGACTTAGATCATGCAGCTTCCTCGTCGCACGCACAAAATGTTGTTGCTG
ATAGTGCCGTGAATGAGAATGGCTTAACAAAAAGCAATCGTGTGACCCAC
TGCGACGAAGaacgagaagagagaagTGATACCCCGAGTACGAGTACTCC
TGCACTCGAGGCACCACCTCTCCAAGCAAAAGTTGAAAAGTACGAGACCC
TCATCAATGgaatgagaaaggaaatTTCGAGTTTGAAAAGCAAATGTACA
ACGTTGGAGAGGCAATGCGCAGACGCCAtccagaaagaagggagggtcgt
CGCACAACTGAGTGGTACCTTAACGGCTCTCAAGCAAAGCCAGGATGAGT
GCTTACAATTACGGAAACAATGTCAAGACCTTAAAGAACAGCAGCCGAAG
GGATTGGTACAGCAGGAAAATCAGGAGTCAGTGCAGCAGATGCGGGTACC
GGAGGTCAAGAACACGATTATCAGCAGAGATGAAGGAAGCAAGCAGGACG
AGCGAGACTACGAAGAGTTGGAATCTTGGTCTTGA back to top
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