EWM22090.1, cds8589 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|585102507|gb|EWM22090.1| (BSD domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 814.298 bits (2102), Expect = 0.000e+0 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0 Query: 1 MWRTFQQDISEFVSVVTGDAKEALSSVLQTPSEHDNTHVMRKSCDKSNTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLNLTGGDDEEDLSWGDEDEGVSGKKDNSADRVQAPGTEGNNTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTKSNRVTHCDEEREERSDTPSTSTPALEAPPLQAKVEKYETLINGMRKEISSLKSKCTTLERQCADAIQKEGRVVAQLSGTLTALKQSQDECLQLRKQCQDLKEQQPKGLVQQENQESVQQMRVPEVKNTIISRDEGSKQDERDYEELESWS 394 MWRTFQQDISEFVSVVTGDAKEALSSVLQTPSEHDNTHVMRKSCDKSNTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLNLTGGDDEEDLSWGDEDEGVSGKKDNSADRVQAPGTEGNNTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTKSNRVTHCDEEREERSDTPSTSTPALEAPPLQAKVEKYETLINGMRKEISSLKSKCTTLERQCADAIQKEGRVVAQLSGTLTALKQSQDECLQLRKQCQDLKEQQPKGLVQQENQESVQQMRVPEVKNTIISRDEGSKQDERDYEELESWS Sbjct: 1 MWRTFQQDISEFVSVVTGDAKEALSSVLQTPSEHDNTHVMRKSCDKSNTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLNLTGGDDEEDLSWGDEDEGVSGKKDNSADRVQAPGTEGNNTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTKSNRVTHCDEEREERSDTPSTSTPALEAPPLQAKVEKYETLINGMRKEISSLKSKCTTLERQCADAIQKEGRVVAQLSGTLTALKQSQDECLQLRKQCQDLKEQQPKGLVQQENQESVQQMRVPEVKNTIISRDEGSKQDERDYEELESWS 394
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|565385053|ref|XP_006358434.1| (PREDICTED: BSD domain-containing protein 1 [Solanum tuberosum]) HSP 1 Score: 65.855 bits (159), Expect = 4.406e-8 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 0 Query: 48 NTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPL--NLTGGDDEEDLSWGDEDEGVSGKKDNSADRVQAPGTEGNNTE 203 N+ +S +Q L+++Q DP T+ + ED E ++ + ++ +L K E+ L+E+ E + +YK ++ N++D+ETFW RYF+KV L+ Q L DDEE+LSW +DE + ++ + +V G EG+ E Sbjct: 160 NSGRYSRFESQ---LMNIQSDPNTF--CMDPEDLEEYKKWKSEFELKEKSKEVEILIEENESLEGIYKRVVP------------NEVDNETFWCRYFYKVYK-LKQQESVRANLVKRAIAIDDEEELSWDVDDEDDNEQESIAKSKVDEKGKEGSVVE 299
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1063466035|ref|XP_017969770.1| (PREDICTED: BSD domain-containing protein 1 [Theobroma cacao]) HSP 1 Score: 65.4698 bits (158), Expect = 6.323e-8 Identity = 42/129 (32.56%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 48 NTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPL--NLTGGDDEEDLSW 174 N+ +S A + ++Q D T++EA ED E ++ + + L+ K++EI RL+E+ + R+YK ++ G N +DHETFW RYF+KV L + + D L ++EE+LSW Sbjct: 146 NSKRYSRFDAH---VRAIQGDTNTFSEA--PEDLEDYKKWKSGFGLEDKKEEIERLMEENGELRRIYKRVV----------GVSNGVDHETFWCRYFYKVFKLKQAE-DMRVKLVKRAISREEEEELSW 258
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|727429897|ref|XP_010481925.1| (PREDICTED: BSD domain-containing protein 1-like [Camelina sativa]) HSP 1 Score: 65.0846 bits (157), Expect = 6.546e-8 Identity = 62/207 (29.95%), Postives = 97/207 (46.86%), Query Frame = 0 Query: 45 DKSNTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPL--NLTGGDDEEDLSWGDEDEGVSGKKDNSADR-VQAPGTEGNNTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTKSNRV 248 D ++ +S AQ + +Q DP TY E ED + ++ + + LD K +E+ +L ED + +YK + N +DHETFW RYF+KV L + + D L DDEE+LSW +DE S +KD A + V EGN+ S + +E + + Q+ V SA + +G+T+ + V Sbjct: 137 DSFSSKPYSRFDAQ---IRVVQGDPNTYCEE--PEDSDDYKKWESGFSLDEKAEEMEKLFEDNGDMKGVYKRAVP------------NTVDHETFWFRYFYKVHKLKQAE-DLRANLVKRAISLDDEEELSWDIDDEDESSEKDVEATKEVSRLKLEGNDGIMGSGDVSETVKDEVTNADSVAKVSTQDEVTTSADSVDGVTEVSNV 325
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1204896294|ref|XP_021280077.1| (BSD domain-containing protein 1 [Herrania umbratica]) HSP 1 Score: 63.5438 bits (153), Expect = 2.286e-7 Identity = 42/129 (32.56%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 48 NTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPL--NLTGGDDEEDLSW 174 N+ +S AQ + ++Q + T++EA ED E ++ + + L K++EI RL+E+ + +YK ++ G N++DHETFW RYFFKV L + + D L ++EE+LSW Sbjct: 146 NSKRYSRFDAQ---VRAIQGESNTFSEA--PEDLEDYKKWKSGFVLGDKKEEIERLMEENGELRSIYKRVV----------GVSNEVDHETFWCRYFFKVFKLKQAE-DMRVKLVKRAISREEEEELSW 258
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1028963294|ref|XP_016725150.1| (PREDICTED: BSD domain-containing protein 1-like [Gossypium hirsutum]) HSP 1 Score: 63.1586 bits (152), Expect = 3.408e-7 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 0 Query: 48 NTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLN-LTGGDDEEDLSW 174 N+ +S AQ + ++Q D TY E ED E ++ + + L+ K++EI RL+E+ + +YK ++ G N +DHETFW RYF+KV L + + +N ++EE+LSW Sbjct: 140 NSKRYSRFDAQ---VRAIQGDINTYIEE--PEDLEDYKKWKSGFGLEEKKEEIERLMEENGEMGSIYKRIV----------GVSNGVDHETFWCRYFYKVFKLKQAEDMRVKLVNRAISREEEEELSW 252
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1050588360|ref|XP_017615494.1| (PREDICTED: BSD domain-containing protein 1-like [Gossypium arboreum]) HSP 1 Score: 63.1586 bits (152), Expect = 3.628e-7 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 0 Query: 48 NTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLN-LTGGDDEEDLSW 174 N+ +S AQ + ++Q D TY E ED E ++ + + L+ K++EI RL+E+ + +YK ++ G N +DHETFW RYF+KV L + + +N ++EE+LSW Sbjct: 140 NSKRYSRFDAQ---VRAIQGDINTYIEE--PEDLEDYKKWKSGFGLEEKKEEIERLMEENGEMGSIYKRVV----------GVSNGVDHETFWCRYFYKVFKLKQAEDMRVKLVNRAISREEEEELSW 252
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1029108493|ref|XP_016717448.1| (PREDICTED: BSD domain-containing protein 1-like [Gossypium hirsutum]) HSP 1 Score: 62.7734 bits (151), Expect = 4.374e-7 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 0 Query: 48 NTNLHSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLN-LTGGDDEEDLSW 174 N+ +S AQ + ++Q D TY E ED E ++ + + L+ K++EI RL+E+ + +YK ++ G N +DHETFW RYF+KV L + + +N ++EE+LSW Sbjct: 140 NSKRYSRFDAQ---VRAIQGDINTYIEE--PEDLEDYKKWKSGFGLEEKKEEIERLMEENGEMGSIYKRVV----------GVSNGVDHETFWCRYFYKVFKLKQAEDMRVKLVNRAISREEEEELSW 252
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1124037492|ref|XP_019577038.1| (PREDICTED: BSD domain-containing protein 1-like [Rhinolophus sinicus]) HSP 1 Score: 62.7734 bits (151), Expect = 4.428e-7 Identity = 69/244 (28.28%), Postives = 108/244 (44.26%), Query Frame = 0 Query: 45 DKSNTNLHSTLSAQDEDLLSLQRDPKTYTEAIAE-EDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPL--NLTGGDDEEDLSWG-DEDEGVSGKKDNSADRVQAPGTEGNNTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTK-SNRVTHCDEEREERSDTPSTSTPALE-----APPLQAKV 278 D ++ +S AQ + ++Q DP TY+E + +D +RW+ ++ L K +E+ LLE + +YK L+ N +DH+TFW RYF+K+ L + + D L DDEE+LSW D+DE S K + V EGN+ G D+ S + V D + + +T+ SN D + EE+ +T S P + APP +V Sbjct: 137 DSFSSKPYSRFDAQ---VRAVQGDPNTYSEDPDDSDDYKRWE---SEFSLGEKAEEMDLLLEANGDMKGVYKRLVP------------NMVDHQTFWFRYFYKLHKLKQAE-DLRANLVKRAISLDDEEELSWDIDDDEETSEKGTEATKEVSRLRLEGNDDTGSG-----------DVSETVKDSVTEKSVKDEVTSADSVTEVSNVGLKTDTDSEEKKETGSEKVPESKIVVDAAPPASDEV 350
BLAST of EWM22090.1 vs. NCBI_GenBank
Match: gi|1072909223|ref|XP_018441205.1| (PREDICTED: BSD domain-containing protein 1 [Raphanus sativus]) HSP 1 Score: 62.003 bits (149), Expect = 6.953e-7 Identity = 63/218 (28.90%), Postives = 98/218 (44.95%), Query Frame = 0 Query: 52 HSTLSAQDEDLLSLQRDPKTYTEAIAEEDKERWQIFLAQLQLDTKQDEIARLLEDQEHVARLYKVLISSDQKHYDGNGTGNQIDHETFWSRYFFKVESLLRPQRDFPPPLNLTGGDDEEDLSW--GDEDEGVSGKKDNSADRVQAPGTEGNNTEPPGASNSSSPMEEPDLDHAASSSHAQNVVADSAVNENGLTKSNRVTHCDEEREERSDTPSTSTP 267 +S AQ + ++Q D TY+E +ED + ++ + A+ + + +E+ LLE + +YK ++ S +DHETFW RYF+KV L + + + DDEE+LSW DE+E S K D A V EGN+ S + E D S +V + +V+E SN + D EE+ +T S P Sbjct: 138 YSRFDAQ---VRAVQGDVSTYSEE-PDEDSDEYRKWEAEFPIGDRSEEMEMLLEGNGEMRGVYKRVVPS------------VVDHETFWFRYFYKVYKLKQAEDLRANLVKRAALDDEEELSWDIDDEEETASEKVDEVAKDVSRLKLEGND---------SGDVSETVKDSVTDKSVKDDVTSADSVSE----VSNVGLNTDTRSEEKKETGSEKVP 326 The following BLAST results are available for this feature:
BLAST of EWM22090.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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