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Properties
| Property Name | Value |
|---|
| Product | cysteine proteinase |
| Orig transcript id | gnl|cribi|Naga_100039g23.4414.mrna |
| Orig protein id | gnl|cribi|Naga_100039g23.4414 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:416815..419013 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8609 ID=rna8609|Name=rna8609|organism=Nannochloropsis gaditana|type=mRNA|length=550bp
ATGCGTCCGACGGGCCGCCCCTGGCCCGTCTCCCAAGCCTTCGCCGACCC
GCGCCCCCTCCCGCGCGCCCTCGCGCAATCCCACCAAACCTCCTCGTCCT
TCTCCCACCCGCATGCCCACCAGGGCTCCCACTCGCCGACCCGCCCGCCA
GCCCACCCGGCAGCCCACTCGCCGCCCCACCCGCGCCCCGACCCAGAGGC
CGGGACCGTTTCAGTGGCCTCCTCGTTCTGTCGTTAGGGAACTCGGCGGA
TCTTCCCCCAGCCTCCTCGGGCGACCGGAGGGACGTTCCCGCTCAGCCTC
ACTGCCTTCGCTTTCCATGCGGTCGCCGAGTCGGGCTCCGTCTCGAGTGC
CCAGCCTGGCCGAGGTCGTCCGCCATGAGCTGCTGGAGGAGACGCATGGC
TTGGGCTTCGAGGAGGACGATGACATTTGGCACCGCTCCCTGCAAGAGGG
ATCAGGGAAGGCAGGTGCCGAGAGCGGACCCAGAGTGACCATCGCCAATC
CCGGCGTGGGCGAAACCTTTTACAACGGAGCCGTCGCTTTGATTCGCTGG back to topprotein sequence of rna8609 >rna8609-protein ID=rna8609-protein|Name=rna8609|organism=Nannochloropsis gaditana|type=polypeptide|length=620bp
MIFGRRRYSSLRSMLRPLTIFITQFMLLSVGMPPRSAATSIIEGDREGAL
LWERYEMYVREFNKTFASTLDKEAAFSHFGRTDAYLRAFSSPSSSSTPPS
APSFTVGHSHFSDWSPEEIQAHFSASSVSWARAFEFPGQSQARNQGRGGL
RVQEEDSTAAWRERDGAFVRDEREPVPAHTALDAFPAGLDPPGTLSGPNT
RPHPGGTGTSSVPGNDPLSFLRLFPPFSHLLPPPRPPPALPTHLDWSLPS
LNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQEL
LDCDVAWNAGCLGGNPIQSYAWVKKHGLAPAQVYPYRGEEQACEARRQEA
VSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEA
CGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIR
RWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGGNATAW
LQAQRMMEGKKDGVIGGQEPKKGEEGKGKRGTGRKGASGADTDDDPIASL
LSTEARRVAVGLVALLILLLGFYYFMRQPVWDPSTAGTGGAWGEGMRRQA
ALGGKPTDGNAVGASRYGSV back to topmRNA from alignment at KK037249.1:416815..419013+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8609 ID=rna8609|Name=rna8609|organism=Nannochloropsis gaditana|type=mRNA|length=2199bp|location=Sequence derived from alignment at KK037249.1:416815..419013+ (Nannochloropsis gaditana)
ggagaggaggccatTTTATGATTTTCGGCCGTCGCCGCTATTCCTCTCTG
CGATCGATGCTGCGCCCCCTCACAATATTTATAACACAGTTTATGCTACT
GAGTGTTGGGATGCCGCCACGTAGTGCGGCCACATCTATTATTGAAGGAG
ATCGTGAGGGCGCACTTTTGTGGGAACGGTATGAGATGTACGTAAGGGAA
TTCAACAAGGTGCGTGAGGAAGGCACTGAGAGCAAGATTCACCGCGtcat
tttcttgctttttggTGTGAAAATACGAAGAGCTGATGTCTGATGGTTGA
CTTTGTCGTATCACACTTGTGGTTTTCTACTGTTCCGGACTCAATATTAA
CTCACGCCCCACTTGAATTAGACTTTCGCGAGCACCCTCGACAAAGAGGC
GGCTTTCAGCCACTTTGGTCGAACAGACGCATATCTCcgtgccttttcct
ctccctcctcttcctccacgcctcctTCTGCGCCATCCTTCACGGTCGGA
CACTCGCATTTCAGTGACTGGAGTCCGGAAGAAATCCAAGCGCATTTCTC
GGCCTCGTCTGTCTCGTGGGCCCGGGCATTCGAATTTCCGGGGCAAAGCC
AGGCACGGAaccaaggaagaggaggtctGAGGGTGCAAGAAGAAGATAGC
ACTGCCGCTTGGCGAGAGCGAGACGGCGCCTTTGTCAGAGACGAGCGGGA
GCCCGTGCCCGCACACACCGCCCTCGATGCTTTCCCCGCCGGCCTTGACC
CTCCCGGCACATTGTCGGGCCCCAACACCCGTCCACACCCAGGAGGAACA
GGCACAAGCTCCGTGCCCGGGAATGATCCAttgtctttcctccgcctctt
ccctcccttttcgcacctcctgcctcccccgcgccctccgcccgcccttc
ccacccacctCGACTggagccttccctccctcaatccGACGGGCCGCAGC
GTCGTGTCGCCACCCGTCAACCAAGGTCGCTGCGGCGGATGTTGGTCGCT
GGTCAGCGCGTCCGTGGTGGAATCCGCCGTGGCCATCTCCACCCGCTCCC
CCGTCACCCCTCTCTCGGCGCAGGAGTTGCTGGACTGCGACGTGGCGTGG
AACGCAGGCTGTCTGGGGGGGAATCCGATCCAGTCCTACGCCTGGGTGAA
GAAGCATGGGCTGGCACCCGCCCAAGTCTACCCGTACCGCGGGGAGGAAC
AGGCGTGCGAGgcgcggaggcaggaagccGTCTCTGCGATTACGGGCTAC
CGTGTGCTGCCTGCCTGCGACGAGGCCgggctgctggaggcggtggcgcg
gCAGCCCGTGGCCGTGGGCATAGCGGGTCAGCATCCTTCCTTCTTATTCT
ACGCGGGGGGCATCTACGACGACGAGGCGTGCGGgagacgggagggcggg
gccacGGTTTTGAACCACGCCTTGGTGGTGGTTGGGTACGGGCGGGACGC
GAAGACAGGCGTGCCCTACTGGAAGTGCAAGAATTCGTGGGGGCAAGcct
ggggggaagacggcttTGTGCGGATCCGGCGGTGGGAGACAGGCCCAGGG
GCTGTGGGAAAAGGGGGtgctcgggagggagagggagtgctGTGCGGGGC
CACGGGCGCGGGGGTGTGTGGGCTGGCCCTTgcgccctccattcctttgG
GTGCCTACGGAGGGAACGCCACGGCCTGGCTGCAGGCACagaggatgatg
gaggggaagaaggacggtgtcattggaggacaggagccgaagaaaggaga
ggagggaaaggggaagagggggacggggaggaagggagcctCGGGGGCAG
ACACGGACGATGACCCTATCGCCTCCTTGCTTTCAACCGAGGCGAGGCGG
GTTGCGGTGGGATTGGTGGCGCTTCTGATCCTCTTGCTGGGTTTTTACTA
TTTCATGCGGCAGCCGGTGTGGGACCCGTCcacggcggggacggggggag
cctggggggaggggatgaggaggcaggcagctCTGGGAGGAAAGCCGACC
GATGGGAACGCAGTAGGAGCGTCGCGGTACGGGTCCGTTTAAAGTAATGC
ATGGGCAACGCAAGCGGCATGTACAATAGACATGTAAGATGAACAATTGA
ACTCTTTTCCCTGCAAAACCGGAACATAGTCTGATGCTTTATTTGACGTT
CCAATTTCGCTCGGGCAGCGGTCGGGAGATTGAGACGTGCGCCCACTCT back to topCoding sequence (CDS) from alignment at KK037249.1:416815..419013+ >rna8609 ID=rna8609|Name=rna8609|organism=Nannochloropsis gaditana|type=CDS|length=3726bp|location=Sequence derived from alignment at KK037249.1:416815..419013+ (Nannochloropsis gaditana)
ATGATTTTCGGCCGTCGCCGCTATTCCTCTCTGCGATCGATGCTGCGCCC
CCTCACAATATTTATAACACAGTTTATGCTACTGAGTGTTGGGATGCCGC
CACGTAGTGCGGCCACATCTATTATTGAAGGAGATCGTGAGGGCGCACTT
TTGTGGGAACGGTATGAGATGTACGTAAGGGAATTCAACAAGACTTTCGC
GAGCACCCTCGACAAAGAGGCGGCTTTCAGCCACTTTGGTCGAACAGACG
CATATCTCcgtgccttttcctctccctcctcttcctccacgcctcctTCT
GCGCCATCCTTCACGGTCGGACACTCGCATTTCAGTGACTGGAGTCCGGA
AGAAATCCAAGCGCATTTCTCGGCCTCGTCTGTCTCGTGGGCCCGGGCAT
TCGAATTTCCGGGGCAAAGCCAGGCACGGAaccaaggaagaggaggtctG
AGGGTGCAAGAAGAAGATAGCACTGCCGCTTGGCGAGAGCGAGACGGCGC
CTTTGTCAGAGACGAGCGGGAGCCCGTGCCCGCACACACCGCCCTCGATG
CTTTCCCCGCCGGCCTTGACCCTCCCGGCACATTGTCGGGCCCCAACACC
CGTCCACACCCAGGAGGAACAGGCACAAGCTCCGTGCCCGGGAATGATCC
Attgtctttcctccgcctcttccctcccttttcgcacctcctgcctcccc
cgcgccctccgcccgcccttcccacccacctCGACTggagccttccctcc
ctcaatccGACGGGCCGCAGCGTCGTGTCGCCACCCGTCAACCAAGGTCG
CTGCGGCGGATGTTGGTCGCTGGTCAGCGCGTCCGTGGTGGAATCCGCCG
TGGCCATCTCCACCCGCTCCCCCGTCACCCCTCTCTCGGCGCAGGAGTTG
CTGGACTGCGACGTGGCGTGGAACGCAGGCTGTCTGGGGGGGAATCCGAT
CCAGTCCTACGCCTGGGTGAAGAAGCATGGGCTGGCACCCGCCCAAGTCT
ACCCGTACCGCGGGGAGGAACAGGCGTGCGAGgcgcggaggcaggaagcc
GTCTCTGCGATTACGGGCTACCGTGTGCTGCCTGCCTGCGACGAGGCCgg
gctgctggaggcggtggcgcggCAGCCCGTGGCCGTGGGCATAGCGGGTC
AGCATCCTTCCTTCTTATTCTACGCGGGGGGCATCTACGACGACGAGGCG
TGCGGgagacgggagggcggggccacGGTTTTGAACCACGCCTTGGTGGT
GGTTGGGTACGGGCGGGACGCGAAGACAGGCGTGCCCTACTGGAAGTGCA
AGAATTCGTGGGGGCAAGcctggggggaagacggcttTGTGCGGATCCGG
CGGTGGGAGACAGGCCCAGGGGCTGTGGGAAAAGGGGGtgctcgggaggg
agagggagtgctGTGCGGGGCCACGGGCGCGGGGGTGTGTGGGCTGGCCC
TTgcgccctccattcctttgGGTGCCTACGGAGGGAACGCCACGGCCTGG
CTGCAGGCACagaggatgatggaggggaagaaggacggtgtcattggagg
acaggagccgaagaaaggagaggagggaaaggggaagagggggacgggga
ggaagggagcctCGGGGGCAGACACGGACGATGACCCTATCGCCTCCTTG
CTTTCAACCGAGGCGAGGCGGGTTGCGGTGGGATTGGTGGCGCTTCTGAT
CCTCTTGCTGGGTTTTTACTATTTCATGCGGCAGCCGGTGTGGGACCCGT
Ccacggcggggacggggggagcctggggggaggggatgaggaggcaggca
gctCTGGGAGGAAAGCCGACCGATGGGAACGCAGTAGGAGCGTCGCGGTA
CGGGTCCGTTTAAATGATTTTCGGCCGTCGCCGCTATTCCTCTCTGCGAT
CGATGCTGCGCCCCCTCACAATATTTATAACACAGTTTATGCTACTGAGT
GTTGGGATGCCGCCACGTAGTGCGGCCACATCTATTATTGAAGGAGATCG
TGAGGGCGCACTTTTGTGGGAACGGTATGAGATGTACGTAAGGGAATTCA
ACAAGACTTTCGCGAGCACCCTCGACAAAGAGGCGGCTTTCAGCCACTTT
GGTCGAACAGACGCATATCTCcgtgccttttcctctccctcctcttcctc
cacgcctcctTCTGCGCCATCCTTCACGGTCGGACACTCGCATTTCAGTG
ACTGGAGTCCGGAAGAAATCCAAGCGCATTTCTCGGCCTCGTCTGTCTCG
TGGGCCCGGGCATTCGAATTTCCGGGGCAAAGCCAGGCACGGAaccaagg
aagaggaggtctGAGGGTGCAAGAAGAAGATAGCACTGCCGCTTGGCGAG
AGCGAGACGGCGCCTTTGTCAGAGACGAGCGGGAGCCCGTGCCCGCACAC
ACCGCCCTCGATGCTTTCCCCGCCGGCCTTGACCCTCCCGGCACATTGTC
GGGCCCCAACACCCGTCCACACCCAGGAGGAACAGGCACAAGCTCCGTGC
CCGGGAATGATCCAttgtctttcctccgcctcttccctcccttttcgcac
ctcctgcctcccccgcgccctccgcccgcccttcccacccacctCGACTg
gagccttccctccctcaatccGACGGGCCGCAGCGTCGTGTCGCCACCCG
TCAACCAAGGTCGCTGCGGCGGATGTTGGTCGCTGGTCAGCGCGTCCGTG
GTGGAATCCGCCGTGGCCATCTCCACCCGCTCCCCCGTCACCCCTCTCTC
GGCGCAGGAGTTGCTGGACTGCGACGTGGCGTGGAACGCAGGCTGTCTGG
GGGGGAATCCGATCCAGTCCTACGCCTGGGTGAAGAAGCATGGGCTGGCA
CCCGCCCAAGTCTACCCGTACCGCGGGGAGGAACAGGCGTGCGAGgcgcg
gaggcaggaagccGTCTCTGCGATTACGGGCTACCGTGTGCTGCCTGCCT
GCGACGAGGCCgggctgctggaggcggtggcgcggCAGCCCGTGGCCGTG
GGCATAGCGGGTCAGCATCCTTCCTTCTTATTCTACGCGGGGGGCATCTA
CGACGACGAGGCGTGCGGgagacgggagggcggggccacGGTTTTGAACC
ACGCCTTGGTGGTGGTTGGGTACGGGCGGGACGCGAAGACAGGCGTGCCC
TACTGGAAGTGCAAGAATTCGTGGGGGCAAGcctggggggaagacggctt
TGTGCGGATCCGGCGGTGGGAGACAGGCCCAGGGGCTGTGGGAAAAGGGG
GtgctcgggagggagagggagtgctGTGCGGGGCCACGGGCGCGGGGGTG
TGTGGGCTGGCCCTTgcgccctccattcctttgGGTGCCTACGGAGGGAA
CGCCACGGCCTGGCTGCAGGCACagaggatgatggaggggaagaaggacg
gtgtcattggaggacaggagccgaagaaaggagaggagggaaaggggaag
agggggacggggaggaagggagcctCGGGGGCAGACACGGACGATGACCC
TATCGCCTCCTTGCTTTCAACCGAGGCGAGGCGGGTTGCGGTGGGATTGG
TGGCGCTTCTGATCCTCTTGCTGGGTTTTTACTATTTCATGCGGCAGCCG
GTGTGGGACCCGTCcacggcggggacggggggagcctggggggaggggat
gaggaggcaggcagctCTGGGAGGAAAGCCGACCGATGGGAACGCAGTAG
GAGCGTCGCGGTACGGGTCCGTTTAA back to top
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