EWM22076.1, cds8582 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|585102493|gb|EWM22076.1| (cysteine proteinase [Nannochloropsis gaditana]) HSP 1 Score: 1254.97 bits (3246), Expect = 0.000e+0 Identity = 620/620 (100.00%), Postives = 620/620 (100.00%), Query Frame = 0
Query: 1 MIFGRRRYSSLRSMLRPLTIFITQFMLLSVGMPPRSAATSIIEGDREGALLWERYEMYVREFNKTFASTLDKEAAFSHFGRTDAYLRAFSSPSSSSTPPSAPSFTVGHSHFSDWSPEEIQAHFSASSVSWARAFEFPGQSQARNQGRGGLRVQEEDSTAAWRERDGAFVRDEREPVPAHTALDAFPAGLDPPGTLSGPNTRPHPGGTGTSSVPGNDPLSFLRLFPPFSHLLPPPRPPPALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKHGLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGGNATAWLQAQRMMEGKKDGVIGGQEPKKGEEGKGKRGTGRKGASGADTDDDPIASLLSTEARRVAVGLVALLILLLGFYYFMRQPVWDPSTAGTGGAWGEGMRRQAALGGKPTDGNAVGASRYGSV 620
MIFGRRRYSSLRSMLRPLTIFITQFMLLSVGMPPRSAATSIIEGDREGALLWERYEMYVREFNKTFASTLDKEAAFSHFGRTDAYLRAFSSPSSSSTPPSAPSFTVGHSHFSDWSPEEIQAHFSASSVSWARAFEFPGQSQARNQGRGGLRVQEEDSTAAWRERDGAFVRDEREPVPAHTALDAFPAGLDPPGTLSGPNTRPHPGGTGTSSVPGNDPLSFLRLFPPFSHLLPPPRPPPALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKHGLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGGNATAWLQAQRMMEGKKDGVIGGQEPKKGEEGKGKRGTGRKGASGADTDDDPIASLLSTEARRVAVGLVALLILLLGFYYFMRQPVWDPSTAGTGGAWGEGMRRQAALGGKPTDGNAVGASRYGSV
Sbjct: 1 MIFGRRRYSSLRSMLRPLTIFITQFMLLSVGMPPRSAATSIIEGDREGALLWERYEMYVREFNKTFASTLDKEAAFSHFGRTDAYLRAFSSPSSSSTPPSAPSFTVGHSHFSDWSPEEIQAHFSASSVSWARAFEFPGQSQARNQGRGGLRVQEEDSTAAWRERDGAFVRDEREPVPAHTALDAFPAGLDPPGTLSGPNTRPHPGGTGTSSVPGNDPLSFLRLFPPFSHLLPPPRPPPALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKHGLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGGNATAWLQAQRMMEGKKDGVIGGQEPKKGEEGKGKRGTGRKGASGADTDDDPIASLLSTEARRVAVGLVALLILLLGFYYFMRQPVWDPSTAGTGGAWGEGMRRQAALGGKPTDGNAVGASRYGSV 620
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|727457819|ref|XP_010510777.1| (PREDICTED: ervatamin-B-like [Camelina sativa]) HSP 1 Score: 172.94 bits (437), Expect = 6.697e-45 Identity = 93/237 (39.24%), Postives = 133/237 (56.12%), Query Frame = 0
Query: 259 VSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQACEARRQEAVS----AITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPL 490
V+P QGRCGGCW+ + + VE I T+ + LS Q+LLDCD +N GC GG +++ ++ K G+ YPY+ EQ C + ++ S I+GY +P +E LL+AV++QPV+VGI G +F Y+GG++D E CG T L+HA+ +VGYG ++ G+ YW KNSWG+ WGEDGF+RI+R P G+CGLA+ PL
Sbjct: 142 VTPVKYQGRCGGCWAFSAVAAVEGITKI-TKGQLVSLSEQQLLDCDRDYNQGCRGGIMSKAFEYIIKNQGITTEDNYPYQESEQTCSSATTQSSSFRAATISGYETVPMNNEEALLQAVSQQPVSVGIEGSGAAFRHYSGGVFDGE-CG------TDLHHAVTIVGYGM-SEEGIKYWVLKNSWGETWGEDGFMRIKRDVDAP--------------------QGMCGLAMLAFYPL 349
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|727484043|ref|XP_010417893.1| (PREDICTED: ervatamin-B-like [Camelina sativa]) HSP 1 Score: 172.17 bits (435), Expect = 1.022e-44 Identity = 92/237 (38.82%), Postives = 133/237 (56.12%), Query Frame = 0
Query: 259 VSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQACEARRQEAVS----AITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPL 490
V+P QGRCGGCW+ + + VE I T+ + LS Q+LLDCD +N GC GG +++ ++ K G+ YPY+ +Q C + ++ S I+GY +P +E LL+AV++QP++VGI G +F Y+GGI+D E CG T L+HA+ +VGYG ++ G+ YW KNSWG+ WGEDGF+RI+R P G+CGLA+ PL
Sbjct: 141 VTPVKYQGRCGGCWAFSAVAAVEGITKI-TKGQLVSLSEQQLLDCDRYYNQGCRGGIMSKAFEYIIKNQGITTEDNYPYQESQQTCSSETTQSSSFRAATISGYETVPMNNEEALLQAVSQQPISVGIEGSGAAFRHYSGGIFDGE-CG------TDLHHAVTIVGYGM-SEEGIKYWVVKNSWGETWGEDGFMRIKRDVDAP--------------------QGMCGLAMLAFYPL 348
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|565473621|ref|XP_006294508.1| (hypothetical protein CARUB_v10023540mg [Capsella rubella] >gi|482563216|gb|EOA27406.1| hypothetical protein CARUB_v10023540mg [Capsella rubella]) HSP 1 Score: 169.474 bits (428), Expect = 1.149e-43 Identity = 94/237 (39.66%), Postives = 130/237 (54.85%), Query Frame = 0
Query: 259 VSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQACEARRQEAVS----AITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPL 490
V+P QGRCGGCW+ + + VE I T + LS Q+LLDCD +N GC GG +++ ++ K G+ YPY+ +Q C A ++ S I+GY +P DE LL+AV++QPV+VGI G +F YAGG++D E CG T L+HA+ +VGYG ++ G YW KNSWG+ WGEDGF+RI+R P G CGLA+ P+
Sbjct: 141 VTPVKYQGRCGGCWAFSAVAAVEGINKI-TNGQLISLSEQQLLDCDRDFNQGCRGGIMSKAFEYIIKNQGITTEANYPYQESQQTCSASTTQSSSFRAATISGYETVPMNDEEALLQAVSQQPVSVGIEGTGEAFRHYAGGVFDGE-CG------TALHHAVTIVGYGM-SEDGTKYWLVKNSWGETWGEDGFMRIKRDVDAP--------------------QGKCGLAMLAFYPV 348
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|1072902087|ref|XP_018440326.1| (PREDICTED: ervatamin-B-like [Raphanus sativus]) HSP 1 Score: 169.088 bits (427), Expect = 1.580e-43 Identity = 86/194 (44.33%), Postives = 122/194 (62.89%), Query Frame = 0
Query: 259 VSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRR 451
V+P QG+CGGCW+ + + VE I+ R + PLS Q+LLDCD N GC GG +++++ K G+A Q YP++ E C + A S ITG++ +P+ +E LLEAV+RQPV+V I P F+ Y+GG+YD+ CG T +NHA+ VGYG + G+ YW KNSWG+ WGE+G++RIRR
Sbjct: 139 VTPVRYQGQCGGCWAFSAVAAVEGVTKIA-RGNLVPLSEQQLLDCDREHNNGCSGGIMSDAFSYIIKNRGIASEQTYPFQMIEGMCRYNGRPAAS-ITGFQTVPSNNERALLEAVSRQPVSVSIDADGPGFMHYSGGVYDEPHCG------TSVNHAVTFVGYGTSPE-GIKYWLAKNSWGETWGENGYIRIRR 323
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|1050634244|ref|XP_017640142.1| (PREDICTED: ervatamin-B-like [Gossypium arboreum]) HSP 1 Score: 167.548 bits (423), Expect = 4.488e-43 Identity = 90/252 (35.71%), Postives = 138/252 (54.76%), Query Frame = 0
Query: 241 PTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQACEARRQ-EAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPL 490
PT+LDW + V+P QG+CG CW+ + + +E V I T S ++ LS Q+LLDC + N GC GG + ++ ++ + G+ + YPY+ ++ C+ +Q V+ I Y+++P DE LL+ VA QPV+V I G F FY+GG++ + CG L+HA+ VVGYG ++ G+ YW KNSWG+ WGE G++RI+R PG G+CG+A+ S P+
Sbjct: 120 PTNLDWR-------AQGAVTPVKFQGQCGCCWAFSAVAAIEGIVQIKTGSLIS-LSEQQLLDCSIDGNRGCDGGLMVNAFEYIIRNQGITTEESYPYQETQETCDTEKQINKVATINEYQMVPENDEEALLKVVASQPVSVAIEGHGQDFRFYSGGVFTGD-CGN------ALSHAVTVVGYGT-SEEGLNYWLVKNSWGETWGEKGYIRIQRDANTPG--------------------GLCGIAMKASYPV 335
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|1029122225|ref|XP_016739542.1| (PREDICTED: ervatamin-B-like [Gossypium hirsutum]) HSP 1 Score: 167.548 bits (423), Expect = 5.145e-43 Identity = 90/252 (35.71%), Postives = 138/252 (54.76%), Query Frame = 0
Query: 241 PTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQACEARRQ-EAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPL 490
PT+LDW + V+P QG+CG CW+ + + +E V I T S ++ LS Q+LLDC + N GC GG + ++ ++ + G+ + YPY+ ++ C+ +Q V+ I Y+++P DE LL+ VA QPV+V I G F FY+GG++ + CG L+HA+ VVGYG ++ G+ YW KNSWG+ WGE G++RI+R PG G+CG+A+ S P+
Sbjct: 121 PTNLDWR-------AQGAVTPVKFQGQCGCCWAFSAVAAIEGIVQIKTGSLIS-LSEQQLLDCSIDGNRGCDGGLMVNAFEYIIRNQGITTEESYPYQETQETCDTEKQINKVATINEYQMVPENDEEALLKVVASQPVSVAIEGHGQDFRFYSGGVFTGD-CGN------ALSHAVTVVGYGT-SEEGLNYWLVKNSWGETWGEKGYIRIQRDVNTPG--------------------GLCGIAMKASYPV 336
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|669149860|ref|XP_008610492.1| (hypothetical protein SDRG_06489 [Saprolegnia diclina VS20] >gi|530738144|gb|EQC36386.1| hypothetical protein SDRG_06489 [Saprolegnia diclina VS20]) HSP 1 Score: 169.859 bits (429), Expect = 2.771e-42 Identity = 94/267 (35.21%), Postives = 140/267 (52.43%), Query Frame = 0
Query: 230 LLPPPRPPPALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKH-GLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGG 495
L+ P +P +DW + V+P NQG CG CW+ + +E A +S++ V+ +S QEL+DCD + GC GG ++ W+K H GL + YPY +E C ++ + V+ ++G+ +PA DE L AVA+QPV+V I P F FY G++ D++CG T L+H ++VVGYG + G YWK KNSWG WG+ G++++ R E GP G CG+A+ PS P + G
Sbjct: 105 LMAPAVNMTDVPNEIDW-------VEQGGVTPVKNQGMCGSCWAFSTTGAIEGAAFVSSKQLVS-VSEQELVDCDHNGDMGCSGGLMDNAFKWIKTHSGLCKEEDYPYHAKEGTCALKKCKPVTKVSGFHDVPANDEQALKAAVAKQPVSVAIEADQPEFQFYKSGVF-DKSCG------TKLDHGVLVVGYGEEG--GKKYWKVKNSWGADWGDKGYIKLAR-EFGP-------------------ETGQCGVAMVPSYPTASIIG 334
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|1004141657|gb|KXZ49648.1| (hypothetical protein GPECTOR_20g505 [Gonium pectorale]) HSP 1 Score: 169.088 bits (427), Expect = 3.267e-42 Identity = 99/254 (38.98%), Postives = 135/254 (53.15%), Query Frame = 0
Query: 239 ALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWV-KKHGLAPAQVYPYRGEEQAC-EARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPL 490
+LPT +DW ++ V+ NQG+CG CW+ + VE AI T V+ LS QEL+DCD + GC GG +YAW+ K G+ + YPY E+ C A++ V I Y +P DE L +A A QPVAV I SF Y GG+YDD +CG T LNH ++VVGYG+D + G YW KNSWG WG+ G++R++ G+ A G+CG+A+APS P+
Sbjct: 136 SLPTSIDWR-------AKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVTGQLVS-LSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGIDTEEDYPYTAEDGVCIAAKKNRRVVTIDAYEDVPENDEVALKKAAAHQPVAVAIEADAKSFQLYGGGVYDDVSCG------TSLNHGVLVVGYGKDPQAG-NYWIVKNSWGPEWGDSGYIRLKM-----------------GI---ADSQGLCGIAMAPSYPI 354
BLAST of EWM22076.1 vs. NCBI_GenBank
Match: gi|813217111|ref|XP_012210477.1| (hypothetical protein SPRG_15912 [Saprolegnia parasitica CBS 223.65] >gi|641524166|gb|KDO18813.1| hypothetical protein SPRG_15912 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 169.474 bits (428), Expect = 3.668e-42 Identity = 95/267 (35.58%), Postives = 139/267 (52.06%), Query Frame = 0
Query: 230 LLPPPRPPPALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKH-GLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGG 495
L+ P +P +DW + V+P NQG CG CW+ + +E A +S++ V+ +S QEL+DCD + GC GG ++ WVK H GL + YPY +E C ++ + V+ +T + +PA DE L AVA+QPV+V I P F FY G++ D++CG T L+H ++VVGYG + G YWK KNSWG WG+ G++++ R E GP G CG+A+ PS P + G
Sbjct: 106 LMAPAVNMTDVPNEMDW-------VEQGGVTPVKNQGMCGSCWAFSTTGAIEGAAFVSSKQLVS-VSEQELVDCDHNGDMGCNGGLMDNAFKWVKTHKGLCKEEDYPYHAKEGTCALKKCKPVTKVTAFHDVPANDEQALKAAVAKQPVSVAIEADQPEFQFYKSGVF-DKSCG------TKLDHGVLVVGYGEEG--GKKYWKVKNSWGADWGDKGYIKLAR-EFGP-------------------ETGQCGVAMVPSYPTASIIG 335 The following BLAST results are available for this feature:
BLAST of EWM22076.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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