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Properties
| Property Name | Value |
|---|
| Product | histone deacetylase |
| Orig transcript id | gnl|cribi|Naga_100752g1.1348.mrna |
| Orig protein id | gnl|cribi|Naga_100752g1.1348 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:353801..355627 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8592 ID=rna8592|Name=rna8592|organism=Nannochloropsis gaditana|type=mRNA|length=852bp
ATGGCCGACCCCCTCGATTCTTCCCTGAGGAAACGCGGTGGTGAATCCGC
AGGACATGGGGGAAGCCCTTCCAAATGGGCGCGTCAGGGTAATGAAGACG
CAGGCTTTACTACTGAGGTGGTGGAGGTGGCTGTGGGCGCCGAAAACGAA
AATTGCGCGAAGAGTCACGGCGAGGCCCCTTCCGCCCAAACATTCCCTGC
CCCTCAACCTTGGTCGGACGCCAGAAGCACGGAAAGTAATCGCAGCAACG
AAAGCTTGCAGACCATTGGGATGGTCCCGGATGAGGGGGAGAGTTCTACG
TGGCAAGATGTGGCACAAGAGCATGGCGAACAAACAGGCACGGTGGACCG
GCCCATCCAAGCAGAGACCAGCGGGCGGCAAAGCAACCTTTCTGTCAGTA
TGGGAAGAAGTGTATCAGCAATGTCGACAAGTAACGTGCTAGAAGAGCAA
GCTGGCGTCGGTGGGGATGTACCCATTGCTCCTTCCCCAGTGACCACCCC
GGCAATGGAGCCGCCCCGGTCGCCCTCGCCGCGGCAGACGGAAGCCCAGG
TGTCTGATGAAAGAAAGTCACAACAAACGCACTTCAACAGTCCTCAAGCC
CCGCGCACGGACGGAGTAGATCACTGGATCCTGATGCAGAGGCTTCGAGG
CTTGGACCCTTCCCTTCTCCTCCTCTCGCTGCTTGACGAGGCCGGCCTGA
CCCTGAGCATGCCACTCTCCGTCATGTCTCAGGAGACGCAATGGACGCTG
ATACGCCGCCTCGTGTTGCGGGACGCCCTCTCCTACCGGAAGAAACTCCA
GCACGTGAACACGCTGGACGATGTGTGTGGCGTGCGGGATCCCGGACTTT
AG back to topprotein sequence of rna8592 >rna8592-protein ID=rna8592-protein|Name=rna8592|organism=Nannochloropsis gaditana|type=polypeptide|length=411bp
GEGEGGERRVPEAGGGWRGLIKPDIIFFGESLGDKFSTAMEYDKQRVDLL
LVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAV
VRELWARLGWEGLEEEGEEGGGGGGEGWEFAGQNRYYFVNAKRPVEETSG
EERGEEEGEGGIVEEEVEREEEEVSCPLPVVAHHEGETETEAAAVEAEEV
AARRRKEEDWEVGPGVLRRAEGRREGGREGGWEGGGAPGSGTAMPPEGLS
ESEPLTVDPVAPHHQQLLPLFPALAVPQSPHHGQDLSSFLPPALLSPLNS
PLLPSVEGRRRGEEEEGKKCRGGPGTEWGSKSGTPRSKDSPGGLRGLPSP
SCQPSPFTLQPMSPRSNTLVSTPRGGTMTLMGREGGAEEEASGREGGGRL
AELEREAFYLP back to topmRNA from alignment at KK037249.1:353801..355627+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8592 ID=rna8592|Name=rna8592|organism=Nannochloropsis gaditana|type=mRNA|length=1827bp|location=Sequence derived from alignment at KK037249.1:353801..355627+ (Nannochloropsis gaditana)
ggtgagggggaggggggggagaggagggtgccggaggcgggagggggttg
GAGAGGCCTGATCAAGCCGGATATCATCTTCTTCGGGGAGTCCCTGGGCG
ACAAGTTCAGCACGGCCATGGAGTACGACAAACAGCGCGTGGACCTGTTG
CTCGTCCTGGGTTCTTCTCTTAAGGTGGGGCCCGTGAACAAGATCCTGCA
GTGGCTGCCTGCCCGGGTCCCGCAGGTGCTGATTAATCGGGAGGTGGTGG
GTGCCCCCAACAGATTCGACGTGGAGCTACTGGGGGACTGTGACGCGGTG
GTGAGGGAGCTGTGGGCGAGGCTGGGATGGGagggtctggaggaggaggg
ggaggaaggaggggggggagggggggaggggtgggagttTGCAGGCCAGA
ATCGGTACTACTTCGTGAACGCCAAAcggccggtggaggagacgagcgga
gaggagaggggcgaggaggaaggggaaggagggattgttgaggaggaggt
cgagagggaggaggaggaagtttCCTGTCCTTTGCCTGTAGTGGCGCATC
ACGAAGGAGAgacggagacggaggcggcggccgtggaggcggaggaggtg
gcggcccgacgccggaaggaggaggactgggaaGTAGGCCCGGGGGTGTT
GAGGCGGgcggaaggcaggagggagggagggagggagggagggtgggagg
gagggggggcgccggggTCGGGTACAGCGATGCCCCCCGAGGGCCTTTCC
GAGTCCGAGCCCCTGACAGTAGACCCTGTCGCTCCTCATCATCAGCAGCT
CCTGCCTCTattccccgccctggccgtcCCACAGTCCCCGCACCACGGTC
Aagacctctcctccttcctccctcccgcccttctctccccgctgaactcg
cccctcctcccttctgtggaagggcggaggagaggggaggaggaggaagg
gaaaaagtgtAGAGGAGGGCCGGGGACGGAATGGGGGAGCAAAAGTGGCA
CCCCACGGTCGAAGGATTCCCCGGGAGGCCTCCgaggcctgccctccccc
tcttgccagccctcccccttcaccctCCAGCCCATGTCTCCTCGGTCCAA
CACACTGGTGAGCACGCCCCGGGGGGGTACAATGACGCTGatgggacggg
aaggaggggcggaggaggaggcttccggtagggaagggggcgggcggtTG
GCGGAACTGGAACGGGAGGCGTTCTACCTCCCCTGAGGCCTTTGAAGGGG
AGGTACCAGAgtcgatgaggagggaggaggtacgTGCACGCgacggaaaa
agagggaaaagttTGGAGGAAAGGTGAGGCCtcaggggcaggagagggag
gatgggagggactCGACAgtgaggcgagggaggagaaggcacaggtggtg
gtgagagAGAAGCATGGAGACGGAAGGAAGGTGATGgccgtggaaggagg
agggaagagtccggcgaaaaaagggggaaagatggTTTTCGGAggtgcgg
ggaggggagagaggggggtggggaaggaggtcagTGACACATCCGGGTGT
GACAcaagaaggtggggaggggagctgACGCGGGGAGGGACACTGAAGGT
CGCGCGCGCAGTCCGATTAAAGTAAACGATTTTGAAGTCACTCGTCTCGG
TCGCGGCGATTGCCCACCGGCAGCGGCGACGCGTAAGGTAGGAGTCAGCT
TAAGCGGAATAGAAATGATGCACGGCGCGGGGCTGGGAGAAGCATGTCGA
CGTGAGCAAATGCCGGTCGCGTCGACGAAGGTTAGCCAAGGAAAGCGCAA
CAAAGCCAGAGATGGGGCACGTGCTGA back to topCoding sequence (CDS) from alignment at KK037249.1:353801..355627+ >rna8592 ID=rna8592|Name=rna8592|organism=Nannochloropsis gaditana|type=CDS|length=1236bp|location=Sequence derived from alignment at KK037249.1:353801..355627+ (Nannochloropsis gaditana)
ggtgagggggaggggggggagaggagggtgccggaggcgggagggggttg
GAGAGGCCTGATCAAGCCGGATATCATCTTCTTCGGGGAGTCCCTGGGCG
ACAAGTTCAGCACGGCCATGGAGTACGACAAACAGCGCGTGGACCTGTTG
CTCGTCCTGGGTTCTTCTCTTAAGGTGGGGCCCGTGAACAAGATCCTGCA
GTGGCTGCCTGCCCGGGTCCCGCAGGTGCTGATTAATCGGGAGGTGGTGG
GTGCCCCCAACAGATTCGACGTGGAGCTACTGGGGGACTGTGACGCGGTG
GTGAGGGAGCTGTGGGCGAGGCTGGGATGGGagggtctggaggaggaggg
ggaggaaggaggggggggagggggggaggggtgggagttTGCAGGCCAGA
ATCGGTACTACTTCGTGAACGCCAAAcggccggtggaggagacgagcgga
gaggagaggggcgaggaggaaggggaaggagggattgttgaggaggaggt
cgagagggaggaggaggaagtttCCTGTCCTTTGCCTGTAGTGGCGCATC
ACGAAGGAGAgacggagacggaggcggcggccgtggaggcggaggaggtg
gcggcccgacgccggaaggaggaggactgggaaGTAGGCCCGGGGGTGTT
GAGGCGGgcggaaggcaggagggagggagggagggagggagggtgggagg
gagggggggcgccggggTCGGGTACAGCGATGCCCCCCGAGGGCCTTTCC
GAGTCCGAGCCCCTGACAGTAGACCCTGTCGCTCCTCATCATCAGCAGCT
CCTGCCTCTattccccgccctggccgtcCCACAGTCCCCGCACCACGGTC
Aagacctctcctccttcctccctcccgcccttctctccccgctgaactcg
cccctcctcccttctgtggaagggcggaggagaggggaggaggaggaagg
gaaaaagtgtAGAGGAGGGCCGGGGACGGAATGGGGGAGCAAAAGTGGCA
CCCCACGGTCGAAGGATTCCCCGGGAGGCCTCCgaggcctgccctccccc
tcttgccagccctcccccttcaccctCCAGCCCATGTCTCCTCGGTCCAA
CACACTGGTGAGCACGCCCCGGGGGGGTACAATGACGCTGatgggacggg
aaggaggggcggaggaggaggcttccggtagggaagggggcgggcggtTG
GCGGAACTGGAACGGGAGGCGTTCTACCTCCCCTGA back to top
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