EWM22107.1, cds8565 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|585102526|gb|EWM22107.1| (histone deacetylase, partial [Nannochloropsis gaditana]) HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
Query: 1 GEGEGGERRVPEAGGGWRGLIKPDIIFFGESLGDKFSTAMEYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEEEGEEGGGGGGEGWEFAGQNRYYFVNAKRPVEETSGEERGEEEGEGGIVEEEVEREEEEVSCPLPVVAHHEGETETEAAAVEAEEVAARRRKEEDWEVGPGVLRRAEGRREGGREGGWEGGGAPGSGTAMPPEGLSESEPLTVDPVAPHHQQLLPLFPALAVPQSPHHGQDLSSFLPPALLSPLNSPLLPSVEGRRRGEEEEGKKCRGGPGTEWGSKSGTPRSKDSPGGLRGLPSPSCQPSPFTLQPMSPRSNTLVSTPRGGTMTLMGREGGAEEEASGREGGGRLAELEREAFYLP 411
GEGEGGERRVPEAGGGWRGLIKPDIIFFGESLGDKFSTAMEYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEEEGEEGGGGGGEGWEFAGQNRYYFVNAKRPVEETSGEERGEEEGEGGIVEEEVEREEEEVSCPLPVVAHHEGETETEAAAVEAEEVAARRRKEEDWEVGPGVLRRAEGRREGGREGGWEGGGAPGSGTAMPPEGLSESEPLTVDPVAPHHQQLLPLFPALAVPQSPHHGQDLSSFLPPALLSPLNSPLLPSVEGRRRGEEEEGKKCRGGPGTEWGSKSGTPRSKDSPGGLRGLPSPSCQPSPFTLQPMSPRSNTLVSTPRGGTMTLMGREGGAEEEASGREGGGRLAELEREAFYLP
Sbjct: 1 GEGEGGERRVPEAGGGWRGLIKPDIIFFGESLGDKFSTAMEYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEEEGEEGGGGGGEGWEFAGQNRYYFVNAKRPVEETSGEERGEEEGEGGIVEEEVEREEEEVSCPLPVVAHHEGETETEAAAVEAEEVAARRRKEEDWEVGPGVLRRAEGRREGGREGGWEGGGAPGSGTAMPPEGLSESEPLTVDPVAPHHQQLLPLFPALAVPQSPHHGQDLSSFLPPALLSPLNSPLLPSVEGRRRGEEEEGKKCRGGPGTEWGSKSGTPRSKDSPGGLRGLPSPSCQPSPFTLQPMSPRSNTLVSTPRGGTMTLMGREGGAEEEASGREGGGRLAELEREAFYLP 411
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|551661824|ref|XP_005833678.1| (hypothetical protein GUITHDRAFT_40776, partial [Guillardia theta CCMP2712] >gi|428177820|gb|EKX46698.1| hypothetical protein GUITHDRAFT_40776, partial [Guillardia theta CCMP2712]) HSP 1 Score: 120.939 bits (302), Expect = 9.643e-28 Identity = 56/93 (60.22%), Postives = 76/93 (81.72%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAMEYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWE 111
G++KPDI+FFGE+L + F +++ D + VDL++V+G+SL+V PV++IL + A VP +LINREVVGAPN+FDVELLGDCDAVV EL LGW+
Sbjct: 202 GVLKPDIVFFGEALPNHFFSSLREDLRLVDLVVVIGTSLRVAPVSEILGEVEASVPAILINREVVGAPNQFDVELLGDCDAVVGELCCMLGWD 294
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|831756224|ref|XP_012748657.1| (hypothetical protein SAMD00019534_115160, partial [Acytostelium subglobosum LB1] >gi|735849486|dbj|GAM28340.1| hypothetical protein SAMD00019534_115160, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 114.005 bits (284), Expect = 4.158e-27 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 0
Query: 20 LIKPDIIFFGESLGDKFSTAMEYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGW 110
+KPDI+FFGESL D F + DK +VDLL+V+GSSLKV PV I + L A +PQ+L+NRE+VG P++FD LGDCD VR+L +LGW
Sbjct: 25 FMKPDIVFFGESLPDVFDQCIANDKDKVDLLIVMGSSLKVQPVALIPEILNANIPQILVNRELVGQPHQFDYAYLGDCDDFVRDLENKLGW 115
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|528893345|gb|EPZ33665.1| (Sirtuin family, catalytic core small domain-containing protein [Rozella allomycis CSF55]) HSP 1 Score: 122.479 bits (306), Expect = 1.265e-26 Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0
Query: 10 VPEAGGGWRGLIKPDIIFFGESLGDKFSTAMEYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEG-LEEEGEEGGGGGGEGWEFAGQNRYYFVNAKRPVE 146
VP+ +G+IKPDI+FFGE L F A+ DK +VDL++V+GSSLKV PV IL+++P VPQV INRE + FDVELLG+CD ++ L GW+ LE+ E EF +RY F +A+ P++
Sbjct: 300 VPKCSTCEQGVIKPDIVFFGEKLPSTFDDALNSDKIQVDLVIVIGSSLKVQPVASILEYIPPNVPQVYINRETCRH-HEFDVELLGNCDEIIVNLCQMAGWDSYLEKISEFSCSYISNTIEFFRPHRYLFASARVPIK 436
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|672795339|gb|KFH45897.1| (NAD-dependent protein deacetylase-like protein [Acremonium chrysogenum ATCC 11550]) HSP 1 Score: 120.168 bits (300), Expect = 4.110e-26 Identity = 57/121 (47.11%), Postives = 85/121 (70.25%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAM-EYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEEEGEEGGGGGGEGWEFAGQNRYYF 138
G++KPDIIFFGE L D+FS + E+D+ +VDL++V+G+SLKV PV++I+ WLP+ +PQ+ ++R+ V N FD++LLGDCD V+ EL RLGW+ L E + G E ++R+ F
Sbjct: 376 GIMKPDIIFFGEPLPDEFSKRLTEHDRDKVDLVIVIGTSLKVTPVSEIVSWLPSHIPQIYVSRQAVNHIN-FDIDLLGDCDVVITELCRRLGWD-LNHEMVDPAAGIDVRTEEGYKSRHVF 494
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|1092958947|ref|XP_018748330.1| (NAD-dependent histone deacetylase SIR2 [Fusarium verticillioides 7600] >gi|1092958949|ref|XP_018748331.1| NAD-dependent histone deacetylase SIR2 [Fusarium verticillioides 7600] >gi|584132756|gb|EWG42139.1| NAD-dependent histone deacetylase SIR2 [Fusarium verticillioides 7600] >gi|584132757|gb|EWG42140.1| NAD-dependent histone deacetylase SIR2 [Fusarium verticillioides 7600]) HSP 1 Score: 117.857 bits (294), Expect = 8.111e-26 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAM-EYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEE 115
G++KPDI FFGE+L D+FS + E+D+ +VDL++V+G+SLKV PV++I+ WLPA +PQ+ ++R+ V N FD++LLGDCD VV EL RLGW + E
Sbjct: 283 GVMKPDITFFGEALPDEFSRRLTEHDRDKVDLVIVIGTSLKVTPVSEIVSWLPANIPQIYVSRQAVNHIN-FDIDLLGDCDVVVSELCRRLGWPMVHE 379
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|1111503314|emb|CVK93616.1| (related to NAD-dependent histone deacetylase [Fusarium mangiferae]) HSP 1 Score: 118.242 bits (295), Expect = 1.666e-25 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAM-EYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEE 115
G++KPDI FFGE+L D+FS + E+D+ +VDL++V+G+SLKV PV++I+ WLPA +PQ+ ++R+ V N FD++LLGDCD VV EL RLGW + E
Sbjct: 362 GVMKPDITFFGEALPDEFSRRLTEHDRDKVDLVIVIGTSLKVTPVSEIVSWLPANIPQIYVSRQAVNHIN-FDIDLLGDCDVVVSELCRRLGWPMVHE 458
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|531989596|emb|CCT64400.1| (related to NAD-dependent histone deacetylase [Fusarium fujikuroi IMI 58289] >gi|829108935|gb|KLO85491.1| NAD-dependent histone deacetylase [Fusarium fujikuroi] >gi|829127899|gb|KLP02835.1| NAD-dependent histone deacetylase [Fusarium fujikuroi] >gi|1111490984|emb|CZR36601.1| related to NAD-dependent histone deacetylase [Fusarium proliferatum ET1]) HSP 1 Score: 118.242 bits (295), Expect = 1.817e-25 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAM-EYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEE 115
G++KPDI FFGE+L D+FS + E+D+ +VDL++V+G+SLKV PV++I+ WLPA +PQ+ ++R+ V N FD++LLGDCD VV EL RLGW + E
Sbjct: 362 GVMKPDITFFGEALPDEFSRRLTEHDRDKVDLVIVIGTSLKVTPVSEIVSWLPANIPQIYVSRQAVNHIN-FDIDLLGDCDVVVSELCRRLGWPMVHE 458
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|1111472219|emb|CVK97320.1| (related to NAD-dependent histone deacetylase [Fusarium proliferatum]) HSP 1 Score: 117.857 bits (294), Expect = 1.908e-25 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAM-EYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEE 115
G++KPDI FFGE+L D+FS + E+D+ +VDL++V+G+SLKV PV++I+ WLPA +PQ+ ++R+ V N FD++LLGDCD VV EL RLGW + E
Sbjct: 362 GVMKPDITFFGEALPDEFSRRLTEHDRDKVDLVIVIGTSLKVTPVSEIVSWLPANIPQIYVSRQAVNHIN-FDIDLLGDCDVVVSELCRRLGWPMVHE 458
BLAST of EWM22107.1 vs. NCBI_GenBank
Match: gi|829157797|gb|KLP23426.1| (NAD-dependent histone deacetylase [Fusarium fujikuroi]) HSP 1 Score: 117.857 bits (294), Expect = 1.908e-25 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 19 GLIKPDIIFFGESLGDKFSTAM-EYDKQRVDLLLVLGSSLKVGPVNKILQWLPARVPQVLINREVVGAPNRFDVELLGDCDAVVRELWARLGWEGLEE 115
G++KPDI FFGE+L D+FS + E+D+ +VDL++V+G+SLKV PV++I+ WLPA +PQ+ ++R+ V N FD++LLGDCD VV EL RLGW + E
Sbjct: 362 GVMKPDITFFGEALPDEFSRRLTEHDRDKVDLVIVIGTSLKVTPVSEIVSWLPANIPQIYVSRQAVNHIN-FDIDLLGDCDVVVSELCRRLGWPMVHE 458 The following BLAST results are available for this feature:
BLAST of EWM22107.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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