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Properties
| Property Name | Value |
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| Product | snf7 family protein |
| Orig transcript id | gnl|cribi|Naga_100060g5.5504.mrna |
| Orig protein id | gnl|cribi|Naga_100060g5.5504 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:345753..346965 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8588 ID=rna8588|Name=rna8588|organism=Nannochloropsis gaditana|type=mRNA|length=844bp
ATTTGCAAATGGACGGCCACTGGCTTTGTAAAGGCTATGGTTTAGCAAGG
CTGCCAGACCTGGCTTTGAGCATGTAGTTTACTGCCTCCTCCCCTCTGCC
ATCTTGTCACCCAATCGGGATGGCATTTACCGTCTGATTTAAACCATTTA
AATTTTATTTTCTCCTTTAAACCACCACTAGAGTAATTTTCGACGTGTAC
AAGCATGAGTAGCTTTTTTGGAGGTGGAGGCGGCGCTCAGCCGTCCTCTG
CGAGCAATCAGCAATTGAAGATGGCCAAAGCGGAGGTTAAGATGTACTCG
GATCTGTTCAATAAAATGTGCTCTCTTTGTTTTGAAAAATGTGTGGCGCG
GTACAATGACACGGACCTAAATTTGGGCGAGATGTCGTGTGTAGATCGCT
GCGTCGGGAAGTACCTGGAGTCGCACATGAAGGTTGGGGAGGTATTGAAG
AACTTTGAAGAGCAGGCCAAGCAACAACAGCAAGCGCAAGCTGGAATCCC
GCCTGCCTCTGGATGAAAGTGGACCTTTGCGGCCTGAGAGGTGGAATGAC
TCGAGAAAGAGAGGCAGAAACGTGGTGGCACAATAAAGAGTGGAATTGTA
AATATGGTAGGCCTGACATGCTTGGGAAGAAAGACGCAAGGAGAGAGAGG
GAGAGGTCATGAATCTAGAAAGAGATGGAAGGGGATGGGTGCACTGCGTG
TGAGAGGGAAGCTCACAAGAGGAAGCAGGGCATGCCTGTATGCATGGAGT
AGAGGACGTATCGAGGTCTGCCAGGCATGGTGACAGGAAGCGAGTACGGA
AACGTGCAGGCAAAGAAGTTCTCTGTCCAATGCAGCATCAACGA back to topprotein sequence of rna8588 >rna8588-protein ID=rna8588-protein|Name=rna8588|organism=Nannochloropsis gaditana|type=polypeptide|length=279bp
MAFWLPFRCCMKHIIQYTGPPPWPETGGENLDLPHRLPSCLDSTLTALLS
VAYPYVRDTMEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREE
RKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQM
QIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGL
VEEMVGDAMDSVDVTDEDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEA
GEAVGEEAGMDEEREEMELKKMKERLNAL back to topmRNA from alignment at KK037249.1:345753..346965- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8588 ID=rna8588|Name=rna8588|organism=Nannochloropsis gaditana|type=mRNA|length=1213bp|location=Sequence derived from alignment at KK037249.1:345753..346965- (Nannochloropsis gaditana)
GTGACCGTTTTCATCGGGTGGTGTGCGCAGCATGGCCTTTTGGCTCCCCT
TTCGATGTTGTATGAAGCATATCATCCAATACACAGGACCGCCGCCTTGG
CCAGAGACCGGGGGCGAGAACCTCGACCTCCCCCACCGTCTTCCAAGCTG
CCTCGATTCTACCCTCACTGCCCTGCTCTCTGTAGCTTACCCGTACGTTA
GGGATACCATGGAATTTTTTGGCTTTGGAAAGAAAGTTGAACCCATGGAA
GAGGCCAAAAAGGTGCGTTTCGAGATGCATGAAGGCCGGGGTGCCTGCAG
CTTGTCTGACACGGGGTTGCATTTCCAGAAGATGCGATCCATATTTTCCC
CAAGCGCTGTGTGGCTTACATACATTGCCCACTTCTGCACGCAATTCTGG
GACACAACGCACTTTCACCCACCACCAACATCCCCCTATCTCGTCGACCC
CCCTTCAACCCAGTTGAAGCGCAGCATCGGCCGAGAGATACGATCGGTAG
ATCGAACGCTGATCCATATCGAACGGGAGGAGAGGAAAATTGTTAAAGAA
ATTCAAAAACTTGCCAAGCAGGGGGAGACTCGGCGCGGCGCATTGACCAT
TTTGGCCAAGGATTTGGTTCGCTCACGGAAAACGCGCGAGAAGATGGTGG
GTGGGAAAGCCATGCTCGCCTCGGTACAAATGCAGATTCAGATGCAAATG
TCTACCATCAAGGTGGCGGGCTGCATGCAGAAATCGGCTGATGTATTGAA
GACCTTGAACGCCTTGGTAAAGATCCCTGAATTGAGTAAAGTGTGCCAGG
AGATGGCGCGGGAGATGGAGAGAGCGGGCTTGGTGGAGGAAATGGTAGGA
GACGCCATGGATAGCGTGGATGTCACGGATGAGGACGAGGTGGACATGGA
GGTGCAAAAGGTGCTGGAAGAGCTTGCCTTCAATATGATGAGCGACGCGC
CAGTCGAGCCCATGAAGGCCGTGCAGGAGGCGGGGGAGGCGGTAGGAGAG
GAAGCTGGGATGGATGAAGAGAGGGAGGAAATGGAGCTTAAGAAAATGAA
GGAACGCTTGAATGCGCTGTAAAATTTGTGTAACAGTAAGCTGGAGTCAA
AGGGAAAGTAGGACTACATTTACAGTTCACAACGGTGGGAAAATAGACGA
AAATTCTAGAACGTTCTTAGACTTGCATCGTTGATGCTGCATTGGACAGA
GAACTTCTTTGCC back to topCoding sequence (CDS) from alignment at KK037249.1:345753..346965- >rna8588 ID=rna8588|Name=rna8588|organism=Nannochloropsis gaditana|type=CDS|length=1680bp|location=Sequence derived from alignment at KK037249.1:345753..346965- (Nannochloropsis gaditana)
TTGAAGCGCAGCATCGGCCGAGAGATACGATCGGTAGATCGAACGCTGAT
CCATATCGAACGGGAGGAGAGGAAAATTGTTAAAGAAATTCAAAAACTTG
CCAAGCAGGGGGAGACTCGGCGCGGCGCATTGACCATTTTGGCCAAGGAT
TTGGTTCGCTCACGGAAAACGCGCGAGAAGATGGTGGGTGGGAAAGCCAT
GCTCGCCTCGGTACAAATGCAGATTCAGATGCAAATGTCTACCATCAAGG
TGGCGGGCTGCATGCAGAAATCGGCTGATGTATTGAAGACCTTGAACGCC
TTGGTAAAGATCCCTGAATTGAGTAAAGTGTGCCAGGAGATGGCGCGGGA
GATGGAGAGAGCGGGCTTGGTGGAGGAAATGGTAGGAGACGCCATGGATA
GCGTGGATGTCACGGATGAGGACGAGGTGGACATGGAGGTGCAAAAGGTG
CTGGAAGAGCTTGCCTTCAATATGATGAGCGACGCGCCAGTCGAGCCCAT
GAAGGCCGTGCAGGAGGCGGGGGAGGCGGTAGGAGAGGAAGCTGGGATGG
ATGAAGAGAGGGAGGAAATGGAGCTTAAGAAAATGAAGGAACGCTTGAAT
GCGCTGTAAATGGCCTTTTGGCTCCCCTTTCGATGTTGTATGAAGCATAT
CATCCAATACACAGGACCGCCGCCTTGGCCAGAGACCGGGGGCGAGAACC
TCGACCTCCCCCACCGTCTTCCAAGCTGCCTCGATTCTACCCTCACTGCC
CTGCTCTCTGTAGCTTACCCGTACGTTAGGGATACCATGGAATTTTTTGG
CTTTGGAAAGAAAGTTGAACCCATGGAAGAGGCCAAAAAGTTGAAGCGCA
GCATCGGCCGAGAGATACGATCGGTAGATCGAACGCTGATCCATATCGAA
CGGGAGGAGAGGAAAATTGTTAAAGAAATTCAAAAACTTGCCAAGCAGGG
GGAGACTCGGCGCGGCGCATTGACCATTTTGGCCAAGGATTTGGTTCGCT
CACGGAAAACGCGCGAGAAGATGGTGGGTGGGAAAGCCATGCTCGCCTCG
GTACAAATGCAGATTCAGATGCAAATGTCTACCATCAAGGTGGCGGGCTG
CATGCAGAAATCGGCTGATGTATTGAAGACCTTGAACGCCTTGGTAAAGA
TCCCTGAATTGAGTAAAGTGTGCCAGGAGATGGCGCGGGAGATGGAGAGA
GCGGGCTTGGTGGAGGAAATGGTAGGAGACGCCATGGATAGCGTGGATGT
CACGGATGAGGACGAGGTGGACATGGAGGTGCAAAAGGTGCTGGAAGAGC
TTGCCTTCAATATGATGAGCGACGCGCCAGTCGAGCCCATGAAGGCCGTG
CAGGAGGCGGGGGAGGCGGTAGGAGAGGAAGCTGGGATGGATGAAGAGAG
GGAGGAAATGGAGCTTAAGAAAATGAAGGAACGCTTGAATGCGCTGTAAA
TGGCCTTTTGGCTCCCCTTTCGATGTTGTATGAAGCATATCATCCAATAC
ACAGGACCGCCGCCTTGGCCAGAGACCGGGGGCGAGAACCTCGACCTCCC
CCACCGTCTTCCAAGCTGCCTCGATTCTACCCTCACTGCCCTGCTCTCTG
TAGCTTACCCGTACGTTAGGGATACCATGGAATTTTTTGGCTTTGGAAAG
AAAGTTGAACCCATGGAAGAGGCCAAAAAG back to top
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