EWM22136.1, cds8561 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|585102556|gb|EWM22136.1| (snf7 family protein [Nannochloropsis gaditana]) HSP 1 Score: 568.155 bits (1463), Expect = 0.000e+0 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0 Query: 1 MAFWLPFRCCMKHIIQYTGPPPWPETGGENLDLPHRLPSCLDSTLTALLSVAYPYVRDTMEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTDEDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279 MAFWLPFRCCMKHIIQYTGPPPWPETGGENLDLPHRLPSCLDSTLTALLSVAYPYVRDTMEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTDEDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL Sbjct: 1 MAFWLPFRCCMKHIIQYTGPPPWPETGGENLDLPHRLPSCLDSTLTALLSVAYPYVRDTMEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTDEDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|298714989|emb|CBJ27710.1| (similar to vacuolar protein sorting 24 homolog [Ectocarpus siliculosus]) HSP 1 Score: 141.739 bits (356), Expect = 1.057e-37 Identity = 78/180 (43.33%), Postives = 121/180 (67.22%), Query Frame = 0 Query: 65 FGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTDED-EVDMEVQKVLEELAFNMMS---DAP 240 +KV+P E+AK+ +RSI E+R+++R ++ +ER E+K+ K+I+ +AK+G A+ +LAK+LV SR + +M GKA L SVQMQ+Q Q++ IKV G ++KS +++ ++ LVKIPEL + ++A EMERAGLVEE+V D + D D + D EV KV+ E+ ++ DAP Sbjct: 5 LHRKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRNAKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAP 184
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|985409731|ref|XP_015370275.1| (PREDICTED: charged multivesicular body protein 3-like [Diuraphis noxia]) HSP 1 Score: 133.65 bits (335), Expect = 1.362e-34 Identity = 80/223 (35.87%), Postives = 143/223 (64.13%), Query Frame = 0 Query: 60 MEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSV--DVTD-EDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279 M FG V+P ++ K+ +I +E +DR + I+REE K+ + +++ AK+G + ILAK+++RSRKT K++ K + S+QMQ++ Q+S +++AG +QKS++V++T++ L+K+PE++ +++++EM +AG++EEM+ D M++V D D E+E E+ KVL E+ + A PM + G +V +E + EE +++E +MK RL AL Sbjct: 1 MGIFGKSATVDPKDQVKQWTSTIRKETYKLDRQIRGIQREEEKVKRSMKEAAKKG--NKDVCIILAKEILRSRKTINKLITSKTHMNSIQMQMKNQLSVLRMAGSLQKSSEVMQTMHNLIKVPEVAATMRDLSKEMMKAGIIEEMLDDTMENVMDDPEDMEEEAQSEIDKVLWEITAGALGQA---PMAVTETPGGSVLQETEIVEEDDDLE--EMKNRLQAL 216
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|985412952|ref|XP_015371997.1| (PREDICTED: charged multivesicular body protein 3-like [Diuraphis noxia]) HSP 1 Score: 132.494 bits (332), Expect = 4.093e-34 Identity = 80/223 (35.87%), Postives = 142/223 (63.68%), Query Frame = 0 Query: 60 MEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSV--DVTD-EDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279 M FG V+P ++ K+ +I +E +DR + I+REE K+ + +++ AK+G + ILAK+++RSRKT K++ K ++S+QMQ++ Q+S +++AG +QKS +V++T++ L+K+PE++ +++++EM +AG++EEM+ D M++V D D E+E E+ KVL E+ + A PM + G +V +E E E+ +L++MK RL AL Sbjct: 1 MGIFGKSATVDPKDQVKQWTSTIRKETYKLDRQIRGIQREEEKVKRSMKEAAKKG--NKDVCIILAKEILRSRKTINKLITSKTHMSSIQMQMKNQLSVLRMAGSLQKSTEVMQTMHNLIKVPEVAATMRDLSKEMMKAGIIEEMLDDTMENVMDDPEDMEEEAQSEIDKVLWEITAGALGQA---PMAVTETPGGSVLQETETVE--EDGDLEEMKNRLQAL 216
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|242247335|ref|NP_001156086.1| (charged multivesicular body protein 3-like [Acyrthosiphon pisum] >gi|239793447|dbj|BAH72838.1| ACYPI001542 [Acyrthosiphon pisum]) HSP 1 Score: 132.109 bits (331), Expect = 4.961e-34 Identity = 80/223 (35.87%), Postives = 142/223 (63.68%), Query Frame = 0 Query: 60 MEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSV--DVTD-EDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279 M FG V+P ++ K+ +I +E +DR + I+REE K+ + +++ AK+G + ILAK+++RSRKT K++ K ++S+QMQ++ Q+S +++AG +QKS +V++T++ L+K+PE++ +++++EM +AG++EEM+ D M++V D D E+E E+ KVL E+ + A PM + G +V +E E E+ +L++MK RL AL Sbjct: 1 MGIFGKSATVDPKDQVKQWTSTIRKETYKLDRQIRGIQREEEKVKRSMKEAAKKG--NKDVCIILAKEILRSRKTINKLITSKTHMSSIQMQMKNQLSILRMAGSLQKSTEVMQTMHNLIKVPEVAATMRDLSKEMMKAGIIEEMLDDTMENVMDDPEDMEEEAQSEIDKVLWEITAGALGQA---PMAVTETPGGSVLQETETVE--EDGDLEEMKNRLQAL 216
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|1207948145|ref|XP_021363976.1| (charged multivesicular body protein 3-like [Mizuhopecten yessoensis] >gi|1205895417|gb|OWF45348.1| Charged multivesicular body protein 3 [Mizuhopecten yessoensis]) HSP 1 Score: 132.109 bits (331), Expect = 5.070e-34 Identity = 74/183 (40.44%), Postives = 120/183 (65.57%), Query Frame = 0 Query: 60 MEFFGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTD--EDEVDMEVQKVLEELAFNMMSDAP 240 M FG + P E ++ + +E ++DR++ I+REE K+ +EI+ LAK+G+ + A+ ILAK++VRSRK ++ KA L SV MQ++ Q + +++ G +QKS +VLK++ LVK+ ++S +EM++EM +AG++EEM+ DA +S+D D E+E D EV+KVL EL + AP Sbjct: 1 MGLFGKTPEKSPKELVQEWNSKLRKEGHNIDRSIKSIQREEAKVTREIKALAKKGD--KDAIKILAKEVVRSRKAVNRLYSSKAQLNSVSMQLKNQAAMVRMTGALQKSGEVLKSMQELVKVSDISNTMREMSKEMMKAGIMEEMMEDAFESMDDQDELEEEADTEVEKVLFELTAGTLGKAP 181
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|341884967|gb|EGT40902.1| (hypothetical protein CAEBREN_20433 [Caenorhabditis brenneri]) HSP 1 Score: 129.413 bits (324), Expect = 3.880e-33 Identity = 72/178 (40.45%), Postives = 123/178 (69.10%), Query Frame = 0 Query: 65 FGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTD-EDEVDMEVQKVLEELAFNMMSDAPV 241 FGKK +P EE ++L+R + +E+R++DR + I+REE+K+ KEI++ AK+G+ + ILAK L++SRK K+ KA + SV M +Q Q++T+++AG +Q+S +V+K + LVK+PE+ K +EM+ EM + G++EEM+ D ++SV+ D E++ EV+ +L E+ + AP+ Sbjct: 4 FGKKKDPKEEVRELQRKMRQEMRALDRQVYSIQREEQKVTKEIKEAAKKGD--KDVCVILAKSLIQSRKAISKIHVSKAQINSVIMCMQEQLATMRMAGALQRSTEVMKNMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEDTLESVEPADLEEKAQEEVENILWEVTQGELGKAPL 179
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|341899020|gb|EGT54955.1| (hypothetical protein CAEBREN_01508 [Caenorhabditis brenneri]) HSP 1 Score: 129.798 bits (325), Expect = 5.816e-33 Identity = 73/178 (41.01%), Postives = 123/178 (69.10%), Query Frame = 0 Query: 65 FGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTD-EDEVDMEVQKVLEELAFNMMSDAPV 241 FGKK +P EE ++L+R + +E+RS+DR + I+REE+K+ KEI++ AK+G+ + ILAK L++SRK K+ KA + SV M +Q Q++T+++AG +Q+S +V+K + LVK+PE+ K +EM+ EM + G++EEM+ D ++SV+ D E++ EV+ +L E+ + AP+ Sbjct: 4 FGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKGD--KDVCVILAKSLIQSRKAISKIHVSKAQINSVIMCMQEQLATMRMAGALQRSTEVMKNMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEDTLESVEPADLEEKAQEEVENILWEVTQGELGKAPL 179
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|597859087|gb|EYC08511.1| (hypothetical protein Y032_0065g3590 [Ancylostoma ceylanicum]) HSP 1 Score: 129.028 bits (323), Expect = 7.131e-33 Identity = 83/216 (38.43%), Postives = 134/216 (62.04%), Query Frame = 0 Query: 65 FGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTD-EDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279 FGKK +P E+ ++++R + EIR++DR + I+REE+K+ KEI++ AK+G+ R +LAK L++SRK K+ KA + SV M +Q Q++T+++AG +QKS VL+ + LVK+PE+ K +EM++EM + G+++EM+ + MDS++ D E+ EV ++L E+ + AP A GE G E E +L M +RL AL Sbjct: 5 FGKKKDPKEQVREMQRKMRGEIRALDRQIYGIQREEQKVTKEIKEAAKKGD--RDVCVVLAKSLLQSRKAVAKIHVSKAQINSVIMCMQEQLATMRMAGSLQKSTQVLQAMQNLVKVPEIMKTMREMSQEMMKLGIIDEMIEETMDSMEPADLEEAAQEEVDRILWEVTAGELGKAP----------AAATGELGGEQEATE--DLSAMAQRLAAL 206
BLAST of EWM22136.1 vs. NCBI_GenBank
Match: gi|510864494|gb|EPB79778.1| (SNF7 family protein [Ancylostoma ceylanicum] >gi|597859089|gb|EYC08513.1| hypothetical protein Y032_0065g3590 [Ancylostoma ceylanicum]) HSP 1 Score: 129.028 bits (323), Expect = 7.165e-33 Identity = 83/216 (38.43%), Postives = 134/216 (62.04%), Query Frame = 0 Query: 65 FGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAMDSVDVTD-EDEVDMEVQKVLEELAFNMMSDAPVEPMKAVQEAGEAVGEEAGMDEEREEMELKKMKERLNAL 279 FGKK +P E+ ++++R + EIR++DR + I+REE+K+ KEI++ AK+G+ R +LAK L++SRK K+ KA + SV M +Q Q++T+++AG +QKS VL+ + LVK+PE+ K +EM++EM + G+++EM+ + MDS++ D E+ EV ++L E+ + AP A GE G E E +L M +RL AL Sbjct: 4 FGKKKDPKEQVREMQRKMRGEIRALDRQIYGIQREEQKVTKEIKEAAKKGD--RDVCVVLAKSLLQSRKAVAKIHVSKAQINSVIMCMQEQLATMRMAGSLQKSTQVLQAMQNLVKVPEIMKTMREMSQEMMKLGIIDEMIEETMDSMEPADLEEAAQEEVDRILWEVTAGELGKAP----------AAATGELGGEQEATE--DLSAMAQRLAAL 205 The following BLAST results are available for this feature:
BLAST of EWM22136.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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