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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100060g9.5481.mrna |
| Orig protein id | gnl|cribi|Naga_100060g9.5481 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:341844..343262 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8585 ID=rna8585|Name=rna8585|organism=Nannochloropsis gaditana|type=mRNA|length=1643bp
TTAGGTGGTACGGTTACCTTGATCTTCCCACGAATTTTGGTTTGATAACG
ACTATTAAACAGGCCCACAGGTAGTGGACCGGCATTTGAGACCGTCATCC
CACTCAAGCAAAGGCCCTTACAGTGTCCACCGCCGGTCGAGTAGGCATCT
TGATGCACTTGCGTCCATCATTCCTGGCACCAGCACCCTTTTCGCGAATT
TGCACGGACAACGGCGTATATTTTAACAGGAGAAGGCACCACCGTGGGAA
GTTGCCCATTGCCTCGGTTGTACCCACCGCTCCGGCTATTGCGGTCGCTT
GACTAGCGTCCACAAAATTAGAAATTTCCACTCCAATTTCATCTGCCAGT
ATGGCGTCACCAGCTATGATATCGACCGTGTCATCCAATTTACAGGCCTT
GTGCAACCATCAAGGTATTGGAGCTTATGCTCTGGCCTTGGGCGGCGCAG
TCTTAGTCCTTGGCCTGGCCTACGTATTTCAACCCGCCGTGGCAGCTTGG
CGACGACCTCGTGAGCGTGAGCCGTATACTTTCACCAGGTATGCGCCAGG
CAGTGGCCTGGCACCCGGCACAGCTTCCTCTCCAGGGAGACGGACTCGAG
CCTCCGCGAAAGCTCCGACTGGAGAAATGAAAGAAGAGTCGTTTCCGACA
TTGGCGGACGCGCCCGAGGTGCTGCTGTCGCTGGTAATCCCCGCCTACAA
CGAAGAGATCCGACTGCCTGTGATGCTGGACACGACACTCGCATACCTGG
AGGCGTGGTCCCAGAACCCAAGAAGCAGCTTGACCTACGAATTGATCGTG
GTAGACGATGGCAGCACGGATGCCACCGTAGTTGTGGCTTCCGAGTACAG
CCGTCGTTTGGGTTCCGACGTGGTGAGGGTTTTAAGATTGCGGAAAAACC
GAGGGAAAGGCGGTGCTATCCGAGAAGGTATGTTGCACGCCCGAGGCCGG
TACGCTCTGATGGTGGACGCAGACGGAGCCACAGATATCACGTGTTTGGA
GCGGCTCTTGAATGCCACACAAGCCGCAGAGGAAGGGAGTTCGGAAGGCA
GCATGGCCGTGGGCGTGGGCAGCCGCGCGCACTACGAGAAGGACTCTGTG
GCGACGCGGGCCTGGTATCGGACCGTGTTGATGAAGGGCTTGCACCTGCT
CGTCACGGTCTTGATCAGTGGGCGGATCCGCGACACCCAGTGCGGCTTCA
AACTCTTTACGCGGGAGGCCATCAAGGTGTGCTTCACCACGTTGCACCTG
GAACGGTGGGGCTTTGACCTGGAGATCGTGCATGTCTGTGACCGGCTGGG
GGTGCCGATGGCGGAAGTGCCCGTCCGCTGGCAGGAAGTGGAGGGCTCGA
AGCTGATCACCAACAAATTGGACGTGGTCTTGGCCTCCATTGGGATATTT
AGAGACATGCTCTGCGTCCGGATTTGCTACTTGCTGGGGCTGTGGCGGAC
GGCACCCTACTCACGTGCGGGACTCTGGCCGGAGGGTGGGAAGTTTGGGA
CAAAGGATCAGGGCATAGACACCAGCCAAGCAGCTAGACATGGGAAAGGC
CAAAGACGACGCAAGGCCGAATAAAGCAGAAGGCGTAGCAGATAGAAGAC
TGGTAAAAGAAAGGAAAGAAACACAAAAGGCACATTGTTCTGT back to topprotein sequence of rna8585 >rna8585-protein ID=rna8585-protein|Name=rna8585|organism=Nannochloropsis gaditana|type=polypeptide|length=361bp
MTQPHLSARRIVPALAISILLVANGGTASAARSFLLKSQHTFAKASNKKG
SHMHDESKVPVIVRLALQYRGGESSSLTKAAEHNASATDESAASSLRDVD
ASEEEEGSQGVEGEAEADPPTEEDEGRAAAGAPGEGAGEGEDEDDAFQDA
VAPDVAPVAEKEEAKHAVEGEEGEEEDGAAAAVATVSQELSGPETVRRQR
AETGGNMKKDKYNAKMQWLITNKMKKVLREELHYEAAEVEAMMPDVAAVV
INKHLERPKRGMPAEWRKDFHLRRRGWDALQAGLVQAARRLVEEPRVLLR
QVGLVAVAAVGAGAARRWMEARRAGEEEEEWEWVEMTPWEEFVDRWQRRL
PGRGRGARGKQ back to topmRNA from alignment at KK037249.1:341844..343262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8585 ID=rna8585|Name=rna8585|organism=Nannochloropsis gaditana|type=mRNA|length=1419bp|location=Sequence derived from alignment at KK037249.1:341844..343262+ (Nannochloropsis gaditana)
CATCGGGAGTAGGGTATCTTGATGGCTTGATCGGTCCAAATGCGTGCGGC
ACCCGAGTCATTCACCACGTACACGCGTATGGACACAGGCGATTCTGCAA
TCACAGTAAGATCACGATGACGCAGCCACATCTGTCGGCGCGGCGGATAG
TGCCTGCCCTCGCAATTAGCATTTTGTTAGTTGCAAACGGAGGCACAGCC
TCGGCCGCAAGAAGTTTTCTTTTAAAAAGCCAGCATACCTTCGCAAAAGC
ATCAAATAAAAAGGGGTCTCACATGCACGACGAATCAAAGGTACCAGTTA
TCGTCCGTCTGGCTTTGCAATATCGTGGAGGCGAAAGTAAGTGGATGAGG
AGCCtatcgggaggggaggagcgaaTGGGCCGCCTGGATAATGGTCTGTT
GTTTGTGAAACCCACCCCAGAAGCATGACCCTACCCACGCTGGCGCATAA
AGTGATGACAAAGGATGCTGTCTAGGGTAGATATAAAGGCTCGATAAGAA
TGGCACACATGTCCTGATCTtgcgcctccatccctctgcCCCTACCCGAC
AAGGCTCCTCCCTGACCAAGGCCGCCGAGCACAACGCCAGCGCCACGGAC
GAGTCTGCTGCCTCCTCACTGCGTGATGTTGACGccagcgaagaggagga
aggtagcCAAGGCGtagaaggggaagcggaggccgATCCGCccacagagg
aggatgaaggtaGAGCAGCCGCGGGCGcccccggggagggggctggcgaa
ggggaggacgaggacgatgcGTTTCAAGACGCCGTGGCCCCTGATGTGGC
CCCTGTGgctgaaaaggaggaggcaaagcatgcggtggagggagaggagg
gggaagaggaggatggcgcgGCCGCCGCGGTGGCGACGGTGAGTCAAGAG
CTGTCAGGACCGGAGACAGTGCGAAGACAACGCGCAGAGACGGGGGGGAA
CATGAAAAAGGACAAATACAACGCCAAGATGCAATGGCTGATCACCAACA
AGATGAAGAAGGTGCTGCGCGAGGAGTTGCACTACGAGGCagcggaagtg
gaggcgatgATGCCGGACGTGGCCGCGGTGGTCATCAACAAGCACCTGGA
ACGGCCCAAGCGAGGCATGCCCGCAGAATGGCGCAAAGACTTCCATTTGC
GACGCCGGGGCTGGGACGCACTCCAGGCCGGTCTTGTCCAAGCGGCGCGG
cggttggtggaggagccgCGGGTGCTGTTGCGACAGGTGGGTTTGGTGGC
TGTGGCCGCGGTGGGCGCGGGGGCGGCGCGGCGGTGGATGGAggcaaggc
gggcgggggaggaggaggaggagtgggagtgGGTGGAGATGACGCCGTGG
GAGGAGTTTGTGGACCGGTGGCAGCGGCGActcccggggagggggcgggg
ggcgagggggaagcagtga back to topCoding sequence (CDS) from alignment at KK037249.1:341844..343262+ >rna8585 ID=rna8585|Name=rna8585|organism=Nannochloropsis gaditana|type=CDS|length=2172bp|location=Sequence derived from alignment at KK037249.1:341844..343262+ (Nannochloropsis gaditana)
ATGACGCAGCCACATCTGTCGGCGCGGCGGATAGTGCCTGCCCTCGCAAT
TAGCATTTTGTTAGTTGCAAACGGAGGCACAGCCTCGGCCGCAAGAAGTT
TTCTTTTAAAAAGCCAGCATACCTTCGCAAAAGCATCAAATAAAAAGGGG
TCTCACATGCACGACGAATCAAAGGTACCAGTTATCGTCCGTCTGGCTTT
GCAATATCGTGGAGGCGAAAGCTCCTCCCTGACCAAGGCCGCCGAGCACA
ACGCCAGCGCCACGGACGAGTCTGCTGCCTCCTCACTGCGTGATGTTGAC
GccagcgaagaggaggaaggtagcCAAGGCGtagaaggggaagcggaggc
cgATCCGCccacagaggaggatgaaggtaGAGCAGCCGCGGGCGcccccg
gggagggggctggcgaaggggaggacgaggacgatgcGTTTCAAGACGCC
GTGGCCCCTGATGTGGCCCCTGTGgctgaaaaggaggaggcaaagcatgc
ggtggagggagaggagggggaagaggaggatggcgcgGCCGCCGCGGTGG
CGACGGTGAGTCAAGAGCTGTCAGGACCGGAGACAGTGCGAAGACAACGC
GCAGAGACGGGGGGGAACATGAAAAAGGACAAATACAACGCCAAGATGCA
ATGGCTGATCACCAACAAGATGAAGAAGGTGCTGCGCGAGGAGTTGCACT
ACGAGGCagcggaagtggaggcgatgATGCCGGACGTGGCCGCGGTGGTC
ATCAACAAGCACCTGGAACGGCCCAAGCGAGGCATGCCCGCAGAATGGCG
CAAAGACTTCCATTTGCGACGCCGGGGCTGGGACGCACTCCAGGCCGGTC
TTGTCCAAGCGGCGCGGcggttggtggaggagccgCGGGTGCTGTTGCGA
CAGGTGGGTTTGGTGGCTGTGGCCGCGGTGGGCGCGGGGGCGGCGCGGCG
GTGGATGGAggcaaggcgggcgggggaggaggaggaggagtgggagtgGG
TGGAGATGACGCCGTGGGAGGAGTTTGTGGACCGGTGGCAGCGGCGActc
ccggggagggggcggggggcgagggggaagcagtgaATGACGCAGCCACA
TCTGTCGGCGCGGCGGATAGTGCCTGCCCTCGCAATTAGCATTTTGTTAG
TTGCAAACGGAGGCACAGCCTCGGCCGCAAGAAGTTTTCTTTTAAAAAGC
CAGCATACCTTCGCAAAAGCATCAAATAAAAAGGGGTCTCACATGCACGA
CGAATCAAAGGTACCAGTTATCGTCCGTCTGGCTTTGCAATATCGTGGAG
GCGAAAGCTCCTCCCTGACCAAGGCCGCCGAGCACAACGCCAGCGCCACG
GACGAGTCTGCTGCCTCCTCACTGCGTGATGTTGACGccagcgaagagga
ggaaggtagcCAAGGCGtagaaggggaagcggaggccgATCCGCccacag
aggaggatgaaggtaGAGCAGCCGCGGGCGcccccggggagggggctggc
gaaggggaggacgaggacgatgcGTTTCAAGACGCCGTGGCCCCTGATGT
GGCCCCTGTGgctgaaaaggaggaggcaaagcatgcggtggagggagagg
agggggaagaggaggatggcgcgGCCGCCGCGGTGGCGACGGTGAGTCAA
GAGCTGTCAGGACCGGAGACAGTGCGAAGACAACGCGCAGAGACGGGGGG
GAACATGAAAAAGGACAAATACAACGCCAAGATGCAATGGCTGATCACCA
ACAAGATGAAGAAGGTGCTGCGCGAGGAGTTGCACTACGAGGCagcggaa
gtggaggcgatgATGCCGGACGTGGCCGCGGTGGTCATCAACAAGCACCT
GGAACGGCCCAAGCGAGGCATGCCCGCAGAATGGCGCAAAGACTTCCATT
TGCGACGCCGGGGCTGGGACGCACTCCAGGCCGGTCTTGTCCAAGCGGCG
CGGcggttggtggaggagccgCGGGTGCTGTTGCGACAGGTGGGTTTGGT
GGCTGTGGCCGCGGTGGGCGCGGGGGCGGCGCGGCGGTGGATGGAggcaa
ggcgggcgggggaggaggaggaggagtgggagtgGGTGGAGATGACGCCG
TGGGAGGAGTTTGTGGACCGGTGGCAGCGGCGActcccggggagggggcg
gggggcgagggggaagcagtga back to top
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