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Properties
| Property Name | Value |
|---|
| Product | cystatin b |
| Orig transcript id | gnl|cribi|Naga_100060g13.5491.mrna |
| Orig protein id | gnl|cribi|Naga_100060g13.5491 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:331029..332753 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8581 ID=rna8581|Name=rna8581|organism=Nannochloropsis gaditana|type=mRNA|length=3380bp
CAGGACTGTGTATTTTGGTCATCTGACGACGGTGGGCTAGGGTAGCGTGT
CGTTCGTCGTCCGTGAAGACTCCTGCCATCGAACCGAGGCGCTATGATGG
ACGTGTCCTCTTCCTCTTCCGCCGCGACGACGACTTCCTCTTTCGTGAAA
TCGAACGGACATCAAACGAATTCACCTCCGCCGTCTTCCACGAATGTCGT
ACCAACCCCATCGGGAAACCGGGACGTGGAAGTCGTTCAACTCATGGAGC
AGCTTTGTCGTCACATGGTACCTCCCGCGCCCGACAACTGCTCCGACGAC
GCGGCTGCCATCTCCACGGCCGTGGCCTCTCGAGTGCATGAAGAAGAAAG
CCTCCTCCGCTCCTGTTTGTATAAGCTAGGGACGTGTCGGCGTCCACCAG
ACGCGGCGTTGGACGACTTTTTCACGCTGCAACAAGCCCAGCGCAAAGTA
CGGCGTTGGGCCGACCTAAACGGGGAAGACGATGGAGGCCGCGCCGACGC
TGCACGGTTGCAAGAACTCTTCCAGAAATTGGGAAAGCCGGCACTAAAAG
GCCAACTCAAGCATGGGTGGGCAGCATTGCACTTGCTGACCCTTTTGAGC
CGAGGCAGGCCTGGGCAGTGGAGAGGGAAGGGGGAGGGCATGGGCCGTCG
GGACCCGGCCATGCTGGACTCTTTCGTCTCCGCCGACCTGCCTCACGCCT
TGCGCACACCCGCTCCTCTTCCCGCAATGCCTGCGGCGGCACCTTCCTCC
ACGTGCGACGACTCTATCTTGAGCATGGGGAGTCTGACCGTTGCCGGCAG
TCAAGGCAGCCGCCCGGGGGGAAGAGCTCCCCCCGGGCACCCCATTACGC
ACGCCCTCCCCGTATCCTATCGAAATCGAGGCCCTGGCAGTATGCAACGC
CCTCCAGACGCCGCCAGTTTCCTCCCTCCCTCGCCCAATGCCTTGGCCAT
GGCCCGGCAGAGTCATTCCTGGGTGGAAGCCACCGACGGGGACGCCCTTG
AGCTCGCCCTCCTCCGCGACTGTCTCTACGCTTTCCAAGGCATCGAGGGC
CGCCTGATCAAATTCGACCCCGGGGCGGAAGCACACATCCTCCACCCGTC
CCTCTCTCTCTCCTACGGCCCGGGGGCCCTGGACGTGGTGCTGCACGTGA
CCGAGATGGGCTGGTTGTTTCGGAAGATCTCGGAGTTTGCGGGCCGGGCC
CGTCGGTCCCCGCGGGAGATGGGCGTGGTGGGACAGGCGTTGGGGCACGT
CTTGGAGGATGAGATCACGGAGTACTACCGGCTGATGGCGGTGTTGGAGA
CCCAGTTGAACGAGCAAGAGCAACAAGACCACCGCCCGGCCCGGCGTCCC
CCCCCCCCCCCGCCCCCTGCGCCCACGACACCAGTCTCTACAGCACTTTC
ACCGCTGCCGCGGCGCGACCCGGAGGTCTGACCCTTCGCCGACTGGCCGT
GTGGGTGGAGGAACCCCTGCAGCGCCTCCGCCTCTTGGGCACCATGTGCG
ACAGCATGCACCACGTCCGTGGGGGCGCCTTGATCTCGGTGCTGCATCTG
CACAGTCAGCAGGGCGATTCTGTCGCCCGGTCGCTCATCCACCGCATGCT
TTCTCGGGTCTCGCTGCCACTGTTTGAGATGCTCCGGCGTTGGATTCTGG
AAGGGGAGCTCTCCGATGCTCATGGGGAATTTTTTGTGGTAGTGGTCGCC
GATCCCCAAGGGAGGGAAAGTCGGAGGGAAAGAGCCCCCGGGCTCGGAGC
CCCACATACTCAGGACAGCGACGAGTCGCTCTGGCACCATCGGTATGCCT
TGCGTCCGGGTATGATTCCGCGCTTTCTCCCCGAGGCCTTGGCCCACAAG
ATTCTTGTGTTGGGGAAATCCATCAATTTTATGCGCCGGTGCTGCTGTGA
CCAGGGATGGTCTGACTCGGAGCCTCGTGGGAATCCTTCTTCCTCTGCCT
CCACCCTGCTCCCTACCGCGGAGGCTCGGCACGCTCGACAGGCCGCGGAG
CTCTACGAGTTCTCCCACGACAAGATGGACGGTCTCCAGGGGGTGGTGGA
CGGGGTCGCTGCGGTCGTGAACGCCCGCCTTCTCTCCCTTCTGATGGGCC
CCCGCTACCAGCTGATGGCCCACCTCCGGGCGCTGAAGAAATTCATCACC
CTTGCCCAGGGCGATTTCGTCACTTGTCTCTTGGATGCGGTCGGTCCTGA
GTTGAGCAAGAGCGCCGACCAACTCTATCGGCACGACTTGACAGGAAAAT
TGGAAGCTGCCTTGCGCACCAGCAACGCGCAGTACGAAGACACGGATATT
TTGAACCGAGTGGGCGTCCGGCTCTTGCCTGCTTCGGGGGGAGAGGAAGG
CTGGGAAGTGTTCGTGTTGGATTACCACGTGCACGCGCCCGTGTCGGCGG
TCGTGCACCGAAAAGCTTTGGAGACATACGCGCGTATCTTCCAGCTCTTA
TTCCGCGTCAAGCGGGTGGAATGGGCCTTGGGCACGTCCTGGAAAGAGCA
CATGATGGTGGGTCAACTTCCCAGAAGGGGCGGGGGCGGGAGAGAAGATG
AAAGCAGAATGGCCTGCATCTTGCAACGCTGCAATCTGACACGGCGCGAG
ATGGTCCATTTTGTCGCCAACTTGTCCTCCTTCATGTGGTTCGAAGTTCT
AGAAGCTTCTTGGACGCAGCTGGAGGCGGACATCGGGGCGGCCAGCGACC
TGGACGCTGTGATCGCTGCCCATGACGCCTACCTGTTGCGGGTCACCCAG
ACGTCTTTCCTGTCTCCCGACAAGGCGCCTTTCCTCACGGCATTGCAAGA
CGTGCTTTCCTCCATCCTCGGCTTCTGTGCCCTGCACGCAGACTTGTGTC
GAGAAGTTTTGAGGGCAAAGGAATTGGACAGGGCGTCGGAGAAAGCCGTG
GGGAGCAGGGGCGTGGTGGGGGAAGAGAGAGCGGAGGCGGCGGGAACTGG
CGTGAAAAGGGAAGGAGGGATTAAGGTAGGGCCTTACGAGGAGAGGGTCG
AGGTGACGACTGCAAGATTTGAGCGTGCCTGTGAGGAGTTGATCGACCTC
TTGCACGCCCAGGACCGAGGGACACAAGCGGCCGTGGCAGAGGCGGACGC
GGTCCGCTTCCTGGTCTTCCGCCTTGATTTCAACCTCTTTTATACCCACC
AACGTCTGGCGCGAGGGAGGCGGGCGTCCTTTGATAAACCTGCTGTACCT
GCCGAGGGATCGATTCCGGTGCTATGATCATGCCATGCTGGGATGGGGAG
GAAGCGACGGTGTGTGTAAGAGGCGGAGTGGAAGGCACATCATATTCGGA
GCGAAGCGTGGTGAAAAAGCAACTATGTGTGACGAAAAGTAGAATTGATA
CCGAAAGAATTCCAAAAGTCTGTTGTATGT back to topprotein sequence of rna8581 >rna8581-protein ID=rna8581-protein|Name=rna8581|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLP
LIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALL
TKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVH
QPLPHTKEPAKLLSAEGGKTLSDAL back to topmRNA from alignment at KK037249.1:331029..332753+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8581 ID=rna8581|Name=rna8581|organism=Nannochloropsis gaditana|type=mRNA|length=1725bp|location=Sequence derived from alignment at KK037249.1:331029..332753+ (Nannochloropsis gaditana)
CTAGTCCTCAAATTCCGCCCCCTGTGCGCCATGCTCGTGGAAATCAGGTG
CCTTGGAGTATACTAGGCATAATACATGATGATGCATGCATGTCATGCCT
CATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCGGCCTTGCTTAGTA
CCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTCTTTCTGGCAGCAT
TTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATATCAGCTCACTCAAA
TCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGTCATGAGTGGCGAT
GCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGGCCAGTCCTGCAGC
TGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAGcccgaggtggaga
aggtgagaAAGGGTATAGAATAAGGATTTGTGATGGACCATGTGACATTA
CGAGAAGGGAGTTTTCCTGGATCATCCGAAAGTTGGCCATAATTGCATAA
TCATCCGCGGGCTGCAACGAATAAAGGGGATAAAAGGACCAGCTCCTGAG
CTCGCATCGTTAACAACCGTAAGATCACCCCTCCACAGCATCTCGCTACC
ACTTTCAAGATGTTTGCACCTCACACTCTCCGCACTCAAGTGGTAAGATG
TGATGCATGGGAGCGTACGCGAGTGGGGTTATCTGGGAAGCCCAGGTCCC
TGTCGTAGTTGACAATCCAGCCTCGCCTTCGCGGATTTTCTGGATTTTCT
GTCCATACTATTCTGCCTTACATCATGTCTGTGTTACCaaatcgtcgtcc
tccccccgtcgACAGGTAGCGGGCACAAATTATCGGTGCAAGGTGGATGT
GGGGGATGGGAATTTTGTTCATGTAGTGGTGCACCAACCTCTGCCTCACA
CCAAAGAGCCCGCCAAGGTAGGATGATCGACAGGGGAACAGTATGAGGGA
CGTGCGTACTGCCTGTGAACCACTTTTAGTGTGAGAGTTGACAAGAAGAG
AGCGTTGACGAGTACAGGGCGATTACGACGCCTCATGGAAAATAATTGAG
ACAGTACGCATGGGCGCCGGGCGGCAATAAGCGCATTGTGAGGCGACTCC
TTCTCTCACATATGCGTGTGTTTTTCACTGTCTTTCCCTGGAAAATCAGC
TCCTATCcgcggaggggggcaagaCACTTTCAGACGCCCTCTAGGTATTT
CCGAGGAGGGACCACGAGCAGGACATTACGACACGTCGTCACAGGCGCAA
ATTACCCAGTGAAGTTCTACACAATGGGGCAGGCAATTAGCAAAAGGTGG
TGAGAGCGTGTTCGCGGGCGAGATGTGGAGTGCGCAAGCGGGCGAGATGT
GGAGTGCGCAAGCTTAGAATGTGCCCGCCCACGAAATAAAATTGAAAAAT
GACGAAGCATGAGAATGGATGTATATAAATGTCCTTGCGGTAAATATGAT
GACGCAGAATATATTTCCTGTCTTTAAGCACAACGTCGAGGGGATATGTA
TGGTGATGCTGTGGGATTAAAGGTCAGTGGATGATAGTATCTCGTGTCCA
CTGGAAGGTCAAAGGAGTAAAGAAACTTCGAAAAAATTGGAATTGTGACG
ATGCCCAGGAATTTGCATTTTTTTGCATTCTCTAAAGCTGCTCTTTGGTG
TTATTCATAAAAACCTTGTCGTTGACTTTTGAAGATTTGTTGGAAGACCA
AGAGCCTAAGGGGCAGAATTTAAAC back to topCoding sequence (CDS) from alignment at KK037249.1:331029..332753+ >rna8581 ID=rna8581|Name=rna8581|organism=Nannochloropsis gaditana|type=CDS|length=2112bp|location=Sequence derived from alignment at KK037249.1:331029..332753+ (Nannochloropsis gaditana)
ATGATGATGCATGCATGTCATGCCTCATTTGTATTGTTGGTGCTGAGCGT
GCGGCATTGGCGGCCTTGCTTAGTACCTCCCTCTGCTGGTTTCAATCAAC
AGACTGCAGCTCTTTCTGGCAGCATTTTTTCCCCACTATCTGTGCTGCCG
CTCATTGAATATCAGCTCACTCAAATCAATTACATAATAGGCTTCTTAAA
TCGTTGGCGTGTCATGAGTGGCGATGCACCCACTGCTGGATTGATCGGCG
GCTTCGGATCGGCCAGTCCTGCAGCTGACCCCGAGGTGACGGCCCTCCTG
ACAAAGATGAAGcccgaggtggagaagCATCTCGCTACCACTTTCAAGAT
GTTTGCACCTCACACTCTCCGCACTCAAGTGGTAGCGGGCACAAATTATC
GGTGCAAGGTGGATGTGGGGGATGGGAATTTTGTTCATGTAGTGGTGCAC
CAACCTCTGCCTCACACCAAAGAGCCCGCCAAGCTCCTATCcgcggaggg
gggcaagaCACTTTCAGACGCCCTCTAGATGATGATGCATGCATGTCATG
CCTCATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCGGCCTTGCTTA
GTACCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTCTTTCTGGCAG
CATTTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATATCAGCTCACTC
AAATCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGTCATGAGTGGC
GATGCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGGCCAGTCCTGC
AGCTGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAGcccgaggtgg
agaagCATCTCGCTACCACTTTCAAGATGTTTGCACCTCACACTCTCCGC
ACTCAAGTGGTAGCGGGCACAAATTATCGGTGCAAGGTGGATGTGGGGGA
TGGGAATTTTGTTCATGTAGTGGTGCACCAACCTCTGCCTCACACCAAAG
AGCCCGCCAAGCTCCTATCcgcggaggggggcaagaCACTTTCAGACGCC
CTCTAGATGATGATGCATGCATGTCATGCCTCATTTGTATTGTTGGTGCT
GAGCGTGCGGCATTGGCGGCCTTGCTTAGTACCTCCCTCTGCTGGTTTCA
ATCAACAGACTGCAGCTCTTTCTGGCAGCATTTTTTCCCCACTATCTGTG
CTGCCGCTCATTGAATATCAGCTCACTCAAATCAATTACATAATAGGCTT
CTTAAATCGTTGGCGTGTCATGAGTGGCGATGCACCCACTGCTGGATTGA
TCGGCGGCTTCGGATCGGCCAGTCCTGCAGCTGACCCCGAGGTGACGGCC
CTCCTGACAAAGATGAAGcccgaggtggagaagCATCTCGCTACCACTTT
CAAGATGTTTGCACCTCACACTCTCCGCACTCAAGTGGTAGCGGGCACAA
ATTATCGGTGCAAGGTGGATGTGGGGGATGGGAATTTTGTTCATGTAGTG
GTGCACCAACCTCTGCCTCACACCAAAGAGCCCGCCAAGCTCCTATCcgc
ggaggggggcaagaCACTTTCAGACGCCCTCTAGATGATGATGCATGCAT
GTCATGCCTCATTTGTATTGTTGGTGCTGAGCGTGCGGCATTGGCGGCCT
TGCTTAGTACCTCCCTCTGCTGGTTTCAATCAACAGACTGCAGCTCTTTC
TGGCAGCATTTTTTCCCCACTATCTGTGCTGCCGCTCATTGAATATCAGC
TCACTCAAATCAATTACATAATAGGCTTCTTAAATCGTTGGCGTGTCATG
AGTGGCGATGCACCCACTGCTGGATTGATCGGCGGCTTCGGATCGGCCAG
TCCTGCAGCTGACCCCGAGGTGACGGCCCTCCTGACAAAGATGAAGcccg
aggtggagaagCATCTCGCTACCACTTTCAAGATGTTTGCACCTCACACT
CTCCGCACTCAAGTGGTAGCGGGCACAAATTATCGGTGCAAGGTGGATGT
GGGGGATGGGAATTTTGTTCATGTAGTGGTGCACCAACCTCTGCCTCACA
CCAAAGAGCCCGCCAAGCTCCTATCcgcggaggggggcaagaCACTTTCA
GACGCCCTCTAG back to top
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