EWM22123.1, cds8554 (CDS) Nannochloropsis gaditana

Overview
NameEWM22123.1
Unique Namecds8554
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:331104..331430 +
Alignment locationKK037249.1:331617..331670 +
Alignment locationKK037249.1:331844..331945 +
Alignment locationKK037249.1:332178..332222 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22123.1
Productcystatin b
Orig transcript idgnl|cribi|Naga_100060g13.5491.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:331104..331430 +
KK037249.1supercontigKK037249.1:331617..331670 +
KK037249.1supercontigKK037249.1:331844..331945 +
KK037249.1supercontigKK037249.1:332178..332222 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0004869cysteine-type endopeptidase inhibitor activity
GO:0004866endopeptidase inhibitor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR000010Prot_inh_cystat
IPR001713Prot_inh_stefinA
Homology
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|585102543|gb|EWM22123.1| (cystatin b [Nannochloropsis gaditana])

HSP 1 Score: 362.844 bits (930), Expect = 5.302e-127
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL
Sbjct:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|585102544|gb|EWM22124.1| (cystatin b [Nannochloropsis gaditana])

HSP 1 Score: 264.233 bits (674), Expect = 2.280e-88
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVA 129
            MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQV A
Sbjct:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVRA 129          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|544087|sp|P35479.1|CPI1_PIG (RecName: Full=Leukocyte cysteine proteinase inhibitor 1; AltName: Full=PLCPI; AltName: Full=Stefin-D1 >gi|460875|gb|AAB29392.1| PLCPI=cysteine proteinase inhibitor [swine, polymorphonuclear leukocytes, Peptide, 103 aa])

HSP 1 Score: 81.6481 bits (200), Expect = 4.221e-17
Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 0
Query:   81 LIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            L GG     PA  PE+  +  K+KP++E+    T++ F     R+QVVAGTNY  KV VG  N+VH+ V Q LPH ++P KL+  +  KT  D L
Sbjct:    7 LAGGLTEPRPAT-PEIQEIANKVKPQLEEKTNKTYEKFEAIIYRSQVVAGTNYYIKVHVGGNNYVHIRVFQSLPHQEDPLKLIGYQVDKTKDDEL 100          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|507541342|ref|XP_004654673.1| (PREDICTED: cystatin-B [Jaculus jaculus])

HSP 1 Score: 80.8777 bits (198), Expect = 1.009e-16
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 0
Query:   90 PAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            PA +P   +L  ++K ++E+     F +F   + R+QVVAGTNY  KVDVGDG F+H+ V +PLPH  +P  LLS +  KT  DAL
Sbjct:   17 PAFNP--NSLEARVKSQLEQKENRKFSVFKAVSYRSQVVAGTNYFIKVDVGDGEFIHMTVLEPLPHENKPLSLLSYQTKKTQDDAL 100          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|478539718|ref|XP_004443952.1| (PREDICTED: stefin-C-like [Ceratotherium simum simum])

HSP 1 Score: 80.4925 bits (197), Expect = 1.071e-16
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   83 GGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            GGF +  PA  PE+ A+  ++KP++E+     F +F     R+QVVAGTNY  KV VGD ++VH+ V + LPH   P  L   +  KT +D L
Sbjct:    4 GGFTNTQPAM-PEIQAIADQVKPQLEEKEKKKFPIFKAVEFRSQVVAGTNYLIKVQVGDDDYVHIQVFKSLPHANRPLDLTRYQTNKTRNDKL 95          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|2494020|sp|Q28986.1|CYTA5_PIG (RecName: Full=Cystatin-A5; AltName: Full=Stefin-A5 >gi|1399335|gb|AAB03261.1| stefin A5 [Sus scrofa])

HSP 1 Score: 79.337 bits (194), Expect = 2.957e-16
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   81 LIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            L GG     PA  PE+  +  K+KP++E+    T++ F     R+QVVAGTNY  KV VG  ++VH++V Q LP   EP KL+  +  KT  D L
Sbjct:    7 LAGGLTEPRPAT-PEIQEIANKVKPQLEEKTKKTYEKFEAIIYRSQVVAGTNYYIKVHVGGNSYVHIIVFQNLPQLNEPLKLIGYQVDKTKDDEL 100          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|47523142|ref|NP_999025.1| (stefin A8 [Sus scrofa] >gi|2494021|sp|Q28987.1|CYTA8_PIG RecName: Full=Cystatin-A8; AltName: Full=Stefin-A8 >gi|1399337|gb|AAB03262.1| stefin A8 [Sus scrofa])

HSP 1 Score: 79.337 bits (194), Expect = 3.512e-16
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   81 LIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            L GG     PA  PE+  +  K+KP++E+    T++ F     R+QVVAGTNY  KV VG  ++VH++V Q LP   EP KL+  +  KT  D L
Sbjct:    7 LAGGLTEPRPAT-PEIQEIANKVKPQLEEKTKKTYEKFEAIIYRSQVVAGTNYYIKVHVGGNSYVHIIVFQNLPQLNEPLKLIGYQVDKTKDDEL 100          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|507622037|ref|XP_004696958.1| (PREDICTED: cystatin-B [Echinops telfairi])

HSP 1 Score: 78.1814 bits (191), Expect = 7.919e-16
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   81 LIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            ++GG  +  PA   E+  ++ K+K +VE+    TF++F     ++QVVAGTNY  KV VG+ NF+H+ VH+ LPH K+P  L + +  KT  D L
Sbjct:    2 MLGGTSATKPAT-AEIQEIVDKVKAQVEEKENKTFQVFKAVEYKSQVVAGTNYFIKVHVGNENFMHLNVHESLPHEKKPLTLSNYQTNKTKHDEL 95          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|942196672|ref|XP_014351120.1| (PREDICTED: cystatin-A [Latimeria chalumnae])

HSP 1 Score: 77.7962 bits (190), Expect = 1.562e-15
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   83 GGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSDAL 175
            GG  +  PA DPEV A   ++K   E+    TF++F     +TQVVAG NY  KV VG  ++VH+ VH+PLPH  E   L S +  K+  D L
Sbjct:   11 GGLANTKPA-DPEVQAFCDQVKAAAEEKAGKTFEIFDAKRYKTQVVAGMNYFIKVHVGGEDYVHLRVHKPLPHKSEAISLASIQTSKSEQDEL 102          
BLAST of EWM22123.1 vs. NCBI_GenBank
Match: gi|1049287917|ref|XP_017540563.1| (PREDICTED: cystatin-B-like [Pygocentrus nattereri])

HSP 1 Score: 77.411 bits (189), Expect = 1.566e-15
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   82 IGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVAGTNYRCKVDVGDGNFVHVVVHQPLPHTKEPAKLLSAEGGKTLSD 173
            IGG GS   +A PEV  +  ++KP+VE+  + TF++F   +  TQVV+G NY  KV VG   + H+ V Q LPH     +LLS + GKTL +
Sbjct:    4 IGGIGS-EMSATPEVQQICDEVKPQVEQKTSRTFEVFVAKSFATQVVSGMNYFIKVQVGGEEYAHLKVFQSLPHAGHKLELLSVQTGKTLDE 94          
The following BLAST results are available for this feature:
BLAST of EWM22123.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102543|gb|EWM22123.1|5.302e-127100.00cystatin b [Nannochloropsis gaditana][more]
gi|585102544|gb|EWM22124.1|2.280e-8899.22cystatin b [Nannochloropsis gaditana][more]
gi|544087|sp|P35479.1|CPI1_PIG4.221e-1743.16RecName: Full=Leukocyte cysteine proteinase inhibi... [more]
gi|507541342|ref|XP_004654673.1|1.009e-1646.51PREDICTED: cystatin-B [Jaculus jaculus][more]
gi|478539718|ref|XP_004443952.1|1.071e-1641.94PREDICTED: stefin-C-like [Ceratotherium simum simu... [more]
gi|2494020|sp|Q28986.1|CYTA5_PIG2.957e-1642.11RecName: Full=Cystatin-A5; AltName: Full=Stefin-A5... [more]
gi|47523142|ref|NP_999025.1|3.512e-1642.11stefin A8 [Sus scrofa] >gi|2494021|sp|Q28987.1|CYT... [more]
gi|507622037|ref|XP_004696958.1|7.919e-1641.05PREDICTED: cystatin-B [Echinops telfairi][more]
gi|942196672|ref|XP_014351120.1|1.562e-1543.01PREDICTED: cystatin-A [Latimeria chalumnae][more]
gi|1049287917|ref|XP_017540563.1|1.566e-1543.48PREDICTED: cystatin-B-like [Pygocentrus nattereri][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8581rna8581Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications