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Properties
| Property Name | Value |
|---|
| Product | nadh dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100060g15.5501.mrna |
| Orig protein id | gnl|cribi|Naga_100060g15.5501 |
| Gene | NDA |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:325566..327092 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8579 ID=rna8579|Name=rna8579|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp
TTAAAGCATTGTTTTGCGATTGATAAGCCTTTACGCATTTTGGAGAGCTC
ATCCTTTGGACCTGACGATACAGGGAGCGCAAGGCTCAAGAGGAGGCCAA
GCGTCAGCATCAGCTCATCCAGGATGCCGTCGAAAAACGGCGACAGGCAC
AGCTGGACAGAATAGAACAAGATCGGCTGGCTGCAGAAGAAGAAAAGAGA
CTGACGGCAGGGATAACGTACTCGTGTGATTTGTGGCCGTATAAGGTTTC
AGGGGAGGGGGATAAGATAATCCTACCACCAAGCGCGCTGGAAACATTGA
CTCAACAGGATGCCCTGGCGCTGGGACCCATGCTGTTCCAATTAAGTCTT
CTACCTGCCGAAGGCAACAAAAGCAAACAACTACCTGCGGGGGCGCGCGT
GACGCACGCAGGCGTCTTGGAATTCTCGGCCGAAGACGGTCGCATCGGCT
TGCCTTTGAAAGTCCGAAAGAGCCTCGAGGCGGAGCCGGAGGAGACAAGA
GAGGACGGAAGTCGGGGCATGGAAAAAAGAATGGAAGGTCCTGGCGGCGA
AGAGGGGGATTCGAGAGAGTCCTCGGCGTGGGGCTCGGGATGGAAGGTCC
GAGTAAAATATGTCCGCCTCGAGAAAGGCACCTACGCCAAGGTCCAGCCC
CGGACAGGCAACCTCTGGCACGTCCCAGAGCTCAAAGGCATGCTGGAGAT
GAATTTACAGAACCACGCGACGCTGTCAGAGGGAGACGTGCTTCAAGTGT
GGTACCGAGGGAGGTGTTTCGATCTGCGGGTGATAGGATTGGAGCCCACT
CAAGCGGTGACGGTGATTGACACGGATTTGACTGTGGACGTGGAGGTGCC
AGAGGAGCAGACGGAGAGGGAAAGGGTGGAGAAGAGGTTGTCAACGGATG
CGGGTGGCGTTAAGGGGCAAGTTGTAGGCGGCGGAGGACCTCCACCGCGC
GTGTCCCAATCGTGCGAGAGCCGTGGGCAGGAAGCGGGCATGGAGGAGTC
GTCGGTGAACAGTGGGGCAAAAGAGGAAGAGAGACGAAAGAGCATGATAG
CCGCACAATTATCAAAGTTGGCACCCGAACCGGATGAAGGGAACGGCGAT
TGGATCGCTCTGGTGGTGCGGAAGCCGGATGGGTCGATGATTTCCCGCAG
ATTTTTGAGATCTCAACCGTTTCAGGATGTTTTTCGGTTCGTTGAAGCCA
CCTCAGTCAGTAGTGATCATGACCGCTTACATATGACGTATCGTCTGGTC
ACACGTTTTCCACGGCGGGTTTTTACAGTGGGGGAGACTGCGGCGCAGAG
TGTCGGAGAAGTTTTGGGCTCAGAGGCGGGGAAAAGGGAAACCCTTATGT
ATGAAGCGTGTGCTTGAGTGGCGAAAAGCCGACCATGCAACATCAAAAAG
CATAAACATATGTACATTTCAATA back to topprotein sequence of rna8579 >rna8579-protein ID=rna8579-protein|Name=rna8579|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MQSSLMACGRLGTSRLQVTAPATHHLWYRCLSAPPQKPPPPPSPEELEKM
VSASESHVKEIRAGTMKKVQPYLVADVPDLPTYLPQKEEEMAVLNEQPAN
QRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPL
SNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDV
ENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPREGAKKK back to topmRNA from alignment at KK037249.1:325566..327092- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8579 ID=rna8579|Name=rna8579|organism=Nannochloropsis gaditana|type=mRNA|length=1527bp|location=Sequence derived from alignment at KK037249.1:325566..327092- (Nannochloropsis gaditana)
AAGCCGGGCAGATGCGGGAACGGATCATTGCATTGAACGCACCTCTTCAC
GGGTGGTGGTAGCTACGTTCTCCTGTATTTACGGACAAGAATTCCTGAGT
GTTAGCGTGGATCTCGAGGGCGGGCTGGGCATGAAATTGGACGCGAGGTG
GTTACGTTGAGCTGAGACCGTGCTCCTGCTCCCTGGGGTCGTCTCCATCT
CGCGCTGATTACTTTGGTTCACTCCGTTCTCTTTGCACTCCTCACACACA
TAGGGCATTTGAAGCATGCAGAGCTCCCTGATGGCCTGCGGTCGGTTGGG
TACCTCTCGACTTCAGGTCACAGCACCAGCAACCCATCACCTTTGGTACA
GATGCCTCTCTGCCCCTCCGCAAAAGCCCCCTCCTCCCCCATCACCAGAG
GAACTAGAGAAAATGGTCAGCGCTTCCGAAAGCCACGTGAAGGAGATTCG
CGCGGGGACTATGAAGAAAGTTCAGCCTTATCTCGTCGCGGACGTGCCTG
ATTTGCCGACTTACCTGCCGCAGAAGGAAGAAGAGATGGCTGTCTTGAAC
GAGCAACCCGCAAACCAGCGGGCTCGCAAAGTTACCATCCGTCAGAAGGC
GCAAACGGCCATGCAATCAGCAGCAAACAAGAGCTACCCTTGGTACATCT
CTTGGGGTTCCCAGGAACGTTGGTCTAACCCCTTGATGGGTTGGACGTCG
ACTGCTGATCCCCTGAGCAATCAACAGCTGGCTTTCGACACGGCAGAGGA
AGCGGCTCGTTTCGCTAAGCGTCAAGGCTGGGCGGTCTCAATTGAGCCTG
CAATTTCTCGGGAACAAGTCTTGGGGACCAAGAAGTACGCCTTCAATTTT
TTGGCGGAGGATGTGGAGAACAAATTGAAGCGAGAGGGCACCAAAACAAA
GCAGTTCACAAACCCTGGCTACACGGCTTCGAATTGGTTTCAACCGCTCA
AGTATCACGGTGACGGAGAATGCGAGCAGCACGGCCCGCCACGGGAGGGA
GCGAAGAAGAAATAGGTCGAGTGACGCGCCCGGGGAGAAATTGATGGGAG
GTGATAATATAGTGGCGACTCAGGAGGGTCTGAGGGGGAGGACGCGGCTC
GCGTGGGACGAGAGAGGGTGCGTGTTCATTGATGGGAATTGTCGTCGATG
TTCTTGCGTGACGTATGTGTCTGGTTGGTGGAAACATAAGATGGACTGGA
CGGGAGAAGCCGCCACCGGGGCGGGACGCCTAGGTAGCTGGATGTTGGGA
GGGAAACTGGCGTTCACCTCGCACTGGCGCGGGATAACCTGGGTTGAAGC
GTTGAAAGTGGTGCCGATGTCTTGTACAACGGAGGCCCGAGGCCAACTAT
TGCGGCCATTCCGCCTGGTGCTTGTCTACCGCAAAGACACTCACGCGTGA
GAGGCGTGGCTCACCGATTGTCAATCATGAATTTATGTCCATTGTCTGCA
CGACCGTGCTCTCAGTCTTAGCTGTTGCATTCTTCTTTGTCAATATATTA
CTTGGAAGCATTGTCTCGCGAACTTCT back to topCoding sequence (CDS) from alignment at KK037249.1:325566..327092- >rna8579 ID=rna8579|Name=rna8579|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at KK037249.1:325566..327092- (Nannochloropsis gaditana)
ATGCAGAGCTCCCTGATGGCCTGCGGTCGGTTGGGTACCTCTCGACTTCA
GGTCACAGCACCAGCAACCCATCACCTTTGGTACAGATGCCTCTCTGCCC
CTCCGCAAAAGCCCCCTCCTCCCCCATCACCAGAGGAACTAGAGAAAATG
GTCAGCGCTTCCGAAAGCCACGTGAAGGAGATTCGCGCGGGGACTATGAA
GAAAGTTCAGCCTTATCTCGTCGCGGACGTGCCTGATTTGCCGACTTACC
TGCCGCAGAAGGAAGAAGAGATGGCTGTCTTGAACGAGCAACCCGCAAAC
CAGCGGGCTCGCAAAGTTACCATCCGTCAGAAGGCGCAAACGGCCATGCA
ATCAGCAGCAAACAAGAGCTACCCTTGGTACATCTCTTGGGGTTCCCAGG
AACGTTGGTCTAACCCCTTGATGGGTTGGACGTCGACTGCTGATCCCCTG
AGCAATCAACAGCTGGCTTTCGACACGGCAGAGGAAGCGGCTCGTTTCGC
TAAGCGTCAAGGCTGGGCGGTCTCAATTGAGCCTGCAATTTCTCGGGAAC
AAGTCTTGGGGACCAAGAAGTACGCCTTCAATTTTTTGGCGGAGGATGTG
GAGAACAAATTGAAGCGAGAGGGCACCAAAACAAAGCAGTTCACAAACCC
TGGCTACACGGCTTCGAATTGGTTTCAACCGCTCAAGTATCACGGTGACG
GAGAATGCGAGCAGCACGGCCCGCCACGGGAGGGAGCGAAGAAGAAATAG back to top
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