EWM22133.1, cds8552 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|585102553|gb|EWM22133.1| (nadh dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 518.079 bits (1333), Expect = 0.000e+0 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MQSSLMACGRLGTSRLQVTAPATHHLWYRCLSAPPQKPPPPPSPEELEKMVSASESHVKEIRAGTMKKVQPYLVADVPDLPTYLPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPREGAKKK 249 MQSSLMACGRLGTSRLQVTAPATHHLWYRCLSAPPQKPPPPPSPEELEKMVSASESHVKEIRAGTMKKVQPYLVADVPDLPTYLPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPREGAKKK Sbjct: 1 MQSSLMACGRLGTSRLQVTAPATHHLWYRCLSAPPQKPPPPPSPEELEKMVSASESHVKEIRAGTMKKVQPYLVADVPDLPTYLPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPREGAKKK 249
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|298709841|emb|CBJ26181.1| (NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]) HSP 1 Score: 139.043 bits (349), Expect = 7.985e-37 Identity = 70/162 (43.21%), Postives = 97/162 (59.88%), Query Frame = 0 Query: 84 LPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSA-ANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244 P+ EE L+ P RKV I QK++ A + A Y W +++ +ERWSNPLMGWTST DP+SN QL+F T E+A +F +++GW ++ RE V G Y+ NFL +VE+ LK GTKT+QFT P AS++ +PL + G QHG P + Sbjct: 79 FPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTAGGLYGWNLTFKQKERWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVKAPAKREAVFGKFAYSHNFLPHNVEHDLKVNGTKTQQFTFPTAGASHYERPLNFVGTAPVRQHGNPEQ 240
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|1173941773|gb|OQR90878.1| (NADH dehydrogenase, ubiquinone iron-sulfur protein 4 [Thraustotheca clavata]) HSP 1 Score: 134.035 bits (336), Expect = 5.076e-35 Identity = 68/157 (43.31%), Postives = 91/157 (57.96%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTK-QFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244 +E AV+N + RK I A+ MQS ++ W I +G+++ W NPLMGWTS ADP+ L F+T EEA FA+RQGW+ + P +E G Y+ NFL DVENKLK+ G K F + S+W + LKYHG+GE QHG +E Sbjct: 68 KECAVVNAVGGWTKGRKAIIFMPARNQMQSGDYNTHHWEIRFGTRQTWQNPLMGWTSGADPIDALTLKFNTKEEALEFAQRQGWSTEVMPVAEKEDFDGKIAYSHNFLPLDVENKLKKYGKKAAPHFKHAKGGHSHWVKTLKYHGNGEVVQHGGDKE 224
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|1173951106|gb|OQR99019.1| (NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Achlya hypogyna]) HSP 1 Score: 129.798 bits (325), Expect = 1.999e-33 Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTK-QFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244 +E AV+N + RK I A+ MQS ++ W I +G+++ W NPLMGWTS ADP+ + F+T EEA FA+RQGW+ + P +E G Y+ NFL DVENKLK+ G K F + S+W + LKY+G+GE QHG +E Sbjct: 70 KECAVVNFVGEWTKGRKAIIYMPARNQMQSGDYNTHHWEIRFGTRQTWQNPLMGWTSGADPMDAMVMKFNTKEEAVAFAQRQGWSTEVMPVAEKEDFEGKIAYSHNFLPLDVENKLKKYGKKAAPHFKHAAGGHSHWVKTLKYNGNGEVVQHGGDKE 226
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|669156964|ref|XP_008614044.1| (hypothetical protein SDRG_09866 [Saprolegnia diclina VS20] >gi|530734301|gb|EQC32543.1| hypothetical protein SDRG_09866 [Saprolegnia diclina VS20]) HSP 1 Score: 127.872 bits (320), Expect = 1.468e-32 Identity = 64/157 (40.76%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTK-TKQFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244 +E +V+N + RK I + MQS ++ W I +G+++ W NPLMGWTS ADP+ + F+T EEA FA RQGW+ + P +E G Y+ NFL DVENKLK+ G K + F + S+W + LKY+G+GE QHG +E Sbjct: 71 KECSVVNFVGEWTKGRKAIIYMPCRNQMQSGDYNTHHWEIRFGTRQTWQNPLMGWTSGADPMDAMVMKFNTKEEAVAFATRQGWSTEVMPVAEKEDFEGKIAYSHNFLPVDVENKLKKYGKKASSHFKHAAGGHSHWVKTLKYNGNGEVVQHGGDKE 227
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|813120012|ref|XP_012196384.1| (hypothetical protein SPRG_02418 [Saprolegnia parasitica CBS 223.65] >gi|641538899|gb|KDO32720.1| hypothetical protein SPRG_02418 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 127.102 bits (318), Expect = 2.276e-32 Identity = 64/157 (40.76%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTK-TKQFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244 +E +V+N + RK I + MQS ++ W I +G+++ W NPLMGWTS ADP+ + F+T EEA FA RQGW+ + P +E G Y+ NFL DVENKLK+ G K + F + S+W + LKY+G+GE QHG +E Sbjct: 71 KECSVVNFVGEWTKGRKAIIYMPCRNQMQSGDYNTHHWEIRFGTRQTWQNPLMGWTSGADPMDAMVMKFNTKEEAVAFATRQGWSTEVMPVAEKEDFEGKIAYSHNFLPVDVENKLKKYGKKASVHFKHAAGGHSHWVKTLKYNGNGEVVQHGGDKE 227
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|301100676|ref|XP_002899427.1| (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, putative [Phytophthora infestans T30-4] >gi|262103735|gb|EEY61787.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, putative [Phytophthora infestans T30-4]) HSP 1 Score: 120.553 bits (301), Expect = 1.225e-29 Identity = 65/153 (42.48%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTK-QFTNPGYTASNWFQPLKYHGDGECEQHG 240 EE A+++ RK + + A+ MQS +++ W I + S W NPLMGWTSTADP FDT EEA RFAK+QGW + I G Y+ NFL E VE +K++G K+ QF +P SNW + LKYHG+G QHG Sbjct: 85 EEAAIMSGTGEWSVGRKANLFKPARNQMQSGIHQTKHWEIRFSSPRTWENPLMGWTSTADPYIGLVTKFDTKEEAERFAKKQGWELEITEPAPVGDYYGKISYSHNFLPEHVETLIKQKGKKSAVQFKHPTGRQSNWVKTLKYHGNGVVAQHG 237
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|675186977|ref|XP_008902373.1| (hypothetical protein PPTG_09242 [Phytophthora parasitica INRA-310] >gi|566028752|gb|ETI51663.1| hypothetical protein F443_05022 [Phytophthora parasitica P1569] >gi|567994847|gb|ETL44996.1| hypothetical protein L916_04840 [Phytophthora parasitica] >gi|568054517|gb|ETM51296.1| hypothetical protein L914_04844 [Phytophthora parasitica] >gi|568097657|gb|ETN12399.1| hypothetical protein PPTG_09242 [Phytophthora parasitica INRA-310] >gi|570332469|gb|ETO80417.1| hypothetical protein F444_05072 [Phytophthora parasitica P1976] >gi|570956453|gb|ETP21447.1| hypothetical protein F441_05029 [Phytophthora parasitica CJ01A1] >gi|970651767|gb|KUF90536.1| NADH dehydrogenase iron-sulfur protein 4 [Phytophthora nicotianae] >gi|970658457|gb|KUF96218.1| Branchpoint-bridging protein [Phytophthora nicotianae]) HSP 1 Score: 120.553 bits (301), Expect = 1.392e-29 Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTK-QFTNPGYTASNWFQPLKYHGDGECEQHG 240 EE A+++ RK + + A+ MQS +++ W I + S W NPLMGWTSTADP FDT EEA RFAK+QGW + IE G Y+ NFL E +E +K++G K+ QF +P SNW + LK+HG+G QHG Sbjct: 85 EEAAIVSGTGEWSVGRKAKLFKPARNQMQSGIHQTKHWEIRFTSPRTWENPLMGWTSTADPYVGMVTKFDTKEEAERFAKKQGWELEIEEPAPVGDYYGKISYSHNFLPEHIETLIKQKGKKSAVQFKHPTGRRSNWVKTLKFHGNGVVAQHG 237
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|568024113|gb|ETL98155.1| (hypothetical protein L917_04739 [Phytophthora parasitica] >gi|570964737|gb|ETP27856.1| hypothetical protein F442_22858 [Phytophthora parasitica P10297]) HSP 1 Score: 120.168 bits (300), Expect = 1.483e-29 Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTK-QFTNPGYTASNWFQPLKYHGDGECEQHG 240 EE A+++ RK + + A+ MQS +++ W I + S W NPLMGWTSTADP FDT EEA RFAK+QGW + IE G Y+ NFL E +E +K++G K+ QF +P SNW + LK+HG+G QHG Sbjct: 85 EEAAIVSGTGEWSVGRKAKLFKPARNQMQSGIHQTKHWEIRFTSPRTWENPLMGWTSTADPYVGMVTKFDTKEEAERFAKKQGWELEIEEPAPVGDYYGKISYSHNFLPEHIETLIKQKGKKSAVQFKHPTGRRSNWVKTLKFHGNGVVAQHG 237
BLAST of EWM22133.1 vs. NCBI_GenBank
Match: gi|567966134|gb|ETK91590.1| (hypothetical protein L915_04893 [Phytophthora parasitica]) HSP 1 Score: 118.242 bits (295), Expect = 9.414e-29 Identity = 63/153 (41.18%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 89 EEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTK-QFTNPGYTASNWFQPLKYHGDGECEQHG 240 EE A+++ RK + + A+ MQS +++ W I + S W NPLMGWTSTADP FDT EEA RFAK+QGW + IE G Y+ NFL E +E +K++G K+ QF +P SNW + L +HG+G QHG Sbjct: 85 EEAAIVSGTGEWSVGRKAKLFKPARNQMQSGIHQTKHWEIRFTSPRTWENPLMGWTSTADPYVGMVTKFDTKEEAERFAKKQGWELEIEEPAPVGDYYGKISYSHNFLPEHIETLIKQKGKKSAVQFKHPTGRRSNWVKTLMFHGNGVVAQHG 237 The following BLAST results are available for this feature:
BLAST of EWM22133.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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