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Properties
| Property Name | Value |
|---|
| Product | tho complex subunit-like protein |
| Orig transcript id | gnl|cribi|Naga_100060g26.5485.mrna |
| Orig protein id | gnl|cribi|Naga_100060g26.5485 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:296884..297923 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8569 ID=rna8569|Name=rna8569|organism=Nannochloropsis gaditana|type=mRNA|length=3976bp
TGCTCTGCCCGGTCCATGATAGTCGGAGCAGCACGTGATGGTGTACAAAC
AAGGGAACTCAACCTAACCCTGCGCCTTGAGCACCAACGTTATCACAGTG
TGCGCATGCAGATGTGAAGGCTGACATATTTATGCCACGGCGCGTGTACA
ATGTTATTTGGTTGTAATGCAAGTGTCGACCGGGTCACAGGATCGGCTTT
GGAAGGAAAGTCTAAGAGAGGTTTGGGTCCGTGTCATCCTTCTAAATTAC
CGCCTTTCTTCCCCTCCGCACTCGTGCGACCGAAATTTTCATAGGCAAGA
ATCACAATCATTTGGCAGGGTGCCGCGGTAGGGGCAAAGGGCGAGCGTGA
GACTGGTTGTTCTTGGGATATTGTATCCTAGCGCGTCTCTGCCTTGTCAA
CCCCCCCTACCTTGCCTGTCAAGTTCACCACGACCTGCCCGTTGCCCAAT
CACGACTTGAAAGCGTCTTTCGACAGTCACACTATCCAGCGCATGGCCCC
AAATGCCGCAGACGAGGAGGATCGGCCCTCCCCGCCATTACTCGTCGTGT
CTGAGCCCCGCTCTTCCTCGCCCTCCGCCGACTGTACCCCCCCGCCAGGA
CACATACTTCCAGGGGAGCCATCCACTTCTCATCATCACCACCGCCACAA
AAGCGCCAGCCCTGGTAAATTCTCGGACGGCTCGGAAGGGATCAGCGTGG
AATCCACCGCCTCCACCTCGGCGGCCTCGCGGACACGGGAGGAAGAAGAA
GCGATCGGACGCGACCATTGCCTCGTCACTTCCTTGGCCTGGGACGTCAC
CTACTCCATCGCCGAGACCAAAGGCCAGCCAGGAGGCCGATGGCTCCCAT
GCCCGAGCCGGTCGGGAAAAAAGCGGAAGAAAAAAGTGATTCTCCACTCC
ATTGTCGGGCAGGCGGAGGCAGGAGACTTGCTGGCGGTCATGGGCCCGTC
CGGCTGTGGGAAGTCCACCTTTCTAAGTTGTCTGGCCCTGCGCGACCAAA
CGTTCCGCGGACAAATCTATTTGAACGAGGCCCCGGCCAGGAAGCAGTAC
CTGTCGATGGTGGGCTTTGTGGACCAGCACGACCTCTTCTATCCCACCCA
GACTGTGCGCGAGCACTTAGAGTTCCACGCAATGGTGCGGCTGGGGGCGC
AGGTACGCACCTCGGCCAAGATGGCCCGGATCCAAGAGGTGTTGATCGAG
CTGAATCTTAGCCATGTGTCCCACACGTACATTGGGGGCGGCCGGAGCGC
CGTGCGTGGCCTGTCGGGGGGGGAACGCCGACGTTTGTCGTTTGCCACGG
AGATGCTTTCGAACCCATCCATCGTGATCGCCGACGAGGCAACCACGGGC
CTGGACGCCTCCATGGCCAAGAGCGTCTGCCGGGTGCTGAGGGGCATGGC
GGACAGCGGGCGCCTGGTGGTGGCCTCCATACACCAACCGTCCTCCCAGA
CCTTCTCCACTTTTACCCACCTGATGCTCCTAGCGGGCCATGGCCACATT
GCCTACTACGGGCCCACGGCTAATCTGCTCGCCTACCTGGCCAGCGTCGG
CCTCCAATGTCCTCCGTACCACAACATGGCGGATTTTGCCGTCCGGTGCG
TCGCGGTGCCGCCGGGAGAAGGAGCCGAGGAGGCCGCCGCTCGGGTGGTC
AAGTTGTGCACAGCGTACACAGAGTCGGAGCTGGCGCAACAAAACCAGGC
CTGGAAGTTCAAGGCGAATTTGCATCCGGTACCCCCGGAAGCCACGCCCA
CGCATGCCGGGGGAGTGAATCGGAGTCATAAATACCAGCACCTAGGCCCG
GGGTGGGTGGGAGAGGAGGACTCGGTGGAGGAAGGGAGGATGGATCCGAT
AATGGCCATGACGGCAGGCCACCCGTCCTTGCAGTCCTTGACGGTCCTGG
AACGGGACGCGGCGGAGTCACTGGAGGGTCCCCACCCGCCGCCGAAGCGG
GGGGATGGTCGAGGGGGCCGGGGGCACGAGAAGGTGTTTGCCCGCGAGTA
CAACGCGTCGTGGACGACCCAGTTTGGGTACTCTCTGGTCCGGCAGCTCC
AGGCCCTGCAACGAGACAAGAAAATGTCCCTGGCCCGGTGCTTTGTGGGG
GTGGGAACGGGCTTGGTGATTGGCCTCGCGTTTCGGGGGCCCAAGGGCCG
GGAATTTGCGCAGGGCGGGATCACGGACACGCTGGGTTTGATGCTCACGT
CGGCCATCTTCTTGCTCATTACGAATTTCTTCCAAGTCGCTTTCACCCTC
CCGGGGGAGCTCCAAGTCTTTTTCCGGGAGCGGCTGGCGGGCGTGAACCG
GGTCAGCACCTACTACGTGGCCCATGTCGTTCAGTCCTTCGCCTTCCTCC
TGGTCTGGACCTTGGCCTTCTGCCTGGTCACCTTCCCTTTGGCCCTGAAC
GGCCTGACGCTCCGGCAGCTCGCGGTTTTCTTCTTGACCGTCACCTTGTC
GAACATTGCCTCTACGGCGTTGGGCTACGTGGTGGCTATCTCCACTCGGA
ACGAGGCGGTCGCCTTGGCACTGGTTCCTCCCATATCGCTGCCCATGGCC
CTGTTCGCCGGCTTTTTGGTGGAACTGAACACAGTGCCGCCCTTTTTGGC
CTGGCTGCAGCATTTGTCCATCGTCAAGTACACGCTGCACGCCCTGGTCT
TGGAGGCCTTTGCCGGCCAAGACATCCATTGCCCCCCCTCGCTCTCCCAC
CCAGGGGAAGGCTCAGACGGGGGAGGTTTACCGGGCGGGGCCCGTTGCGT
GTATCCCTCCACGCCCTCGGTGTTGCGACGATGCTCAGCAGACCAGCATA
CGTTGGAGGAGAATTTGATAATGCTGGCGGGGTTGGGCATAGGCTTGTTG
CTCTTGGGATATTTGGTGTTGGCGCGGCAGGCGATGACGGTCAAGGTGCG
ATAGGCGCGACGGAGCGAGGAAATAGGGGAAAGCGGGAGAATGATATGGT
GGAATCGCTTGAAGGGCCGGTGGGAGGACGGATGAGACGTCGGGAGCAAA
CTACTTGGTGTGACCAATCTATAAGAGGAGGACGGGGAGGGAGGGGGGGT
GTGAGGTGTGGAACGGGCGCAGGCACGTGTGTGGTGGTGGGAAAAGACCT
GGGGAAGGGCGGGGTCAGAGGCGGAGGTTTGTGCAGAGAGGATGTGGAGG
GTAGGAGATGCTATGAAGCCGAGATCGCCCGTCGAAAGAAGGGAATTACA
GTCCTTATTTGAGAGGGGAAAATGGAGCAAAGCGCGGGGAAAAGAGGAGA
GGAGGTGCTGGGAGGAGATGGCCTTGCCGATGGGACCGAGCGGGGACGTC
GTTGACCGTTGGCGCCGGCGACCCGACCCGACATTGATAGGAATATCTTG
TATCCTTTATGGACGGGTTTGCAATGAAGAGAAGATGGTCTCATACACGA
CACGCTCTCGAAAAATTCCACGGTGGCAATCGAGGTGGGAGGAGGTGTGG
AGGCCAAATTTTCTCTAAGGAAGAGCGGTGGAAGTAGGGGGCTGCACAGT
CAATCTCTTAAGCTTTGCACGAAAGTCGTGTGCGTGCGGCGGTAGTGCCA
ATGTTATTTTGCCAAGTGCAAATTTCTTGAAGAGGGCGCGTGATGAGTGT
AAGTGATACTTTGGGAGGGCAGCGACGGAGGAGGTGGGGAAATCTTGGAG
GTGAGTTGATTTTTGTACAGAGGCGTCGACTATTTGCCGTGGGATAATTG
AAACGGACGTAAAGGCCCAATCTAGCAGTAACCAAGCCTCTCTCGGTCTT
TTTCGGTCAAAATGGGAAAATTGGGAAAACAAAGCCAGGATAATTGAGGG
TTGCAGGGGTGCGTGTCATCGCGCAGTAACAGACGGGTACATGCGGAGCA
ATAATATATATATAGTTTTTGGATATTTATTACGGTCGTGGATGGCTAGC
AATTCCACGAGAGGTTGATTTCAATGGCCTAATCTCTATGTTTTAGGGCC
GGGAAAGTCACATACACATGTACCCT back to topprotein sequence of rna8569 >rna8569-protein ID=rna8569-protein|Name=rna8569|organism=Nannochloropsis gaditana|type=polypeptide|length=245bp
MIDRKIFEDRLTYKETTITGHTAVSRLVARFNAFVNAAVSALGASDAKTP
VGLGCGERETALEQYDALVKELTLMRLEIDKAEAVFATLPREREEFEVYS
DTIAQQTARVEAEIVALKERLVVERAIRLQREEYEALAKLVNKYPAKAQT
TVGQTKVAAEIAALEEEKGRLGKAVAMRKRQLSFVLNAVRDLKNGLEYDM
RTDEEKERFLAEQAAAVAKCKEEGGEMEGEGDEDEEDEESEMQMD back to topmRNA from alignment at KK037249.1:296884..297923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8569 ID=rna8569|Name=rna8569|organism=Nannochloropsis gaditana|type=mRNA|length=1040bp|location=Sequence derived from alignment at KK037249.1:296884..297923- (Nannochloropsis gaditana)
ATGATTGACAGGAAGATATTTGAGGACCGATTGACGTACAAAGAGACGAC
AATCACGGGCCACACTGCTGTCAGTCGTCTCGTGGCACGATTTAATGCTT
TTGTCAACGCGGCCGTGAGCGCCCTCGGCGCATCCGACGCGAAGACTCCG
GTTGGTCTGGGATGTGGGGAGAGAGAGACTGCGCTTGAGCAGTACGACGC
CTTGGTCAAGGAGCTGACATTGATGCGGCTTGAGGTAAGGCTCAGTCAGT
CTCAGAGGTTGTGTTATCAAAATTGATGCACTCCAAACGACGATATATGC
GGAGTGAAGCGCCACCTCATCACAGGTCCCCTCCAAGCGACGCTGCTAAC
GCGTCTATCACAAACAATCCCATCCCTCTTTCCCCAATTAATTGTGTACG
CTCGAATCTTAACACCCCTGTCATCATTCTCTGTTGGATCCAGATTGACA
AAGCGGAAGCGGTGTTCGCCACCCTGCCCCGGGAGCGGGAGGAATTCGAA
GTCTATTCCGACACGATAGCCCAACAGACAGCTCGCGTGGAGGCAGAGAT
TGTCGCTCTCAAGGAGAGATTGGTCGTGGAACGTGCAATTCGTCTGCAGC
GCGAAGAATACGAGGCGCTGGCAAAGCTGGTGAACAAATATCCAGCCAAA
GCACAGACGACGGTGGGACAGACCAAAGTGGCGGCAGAGATAGCAGCTTT
GGAGGAAGAGAAAGGAAGGCTTGGCAAGGCAGTGGCCATGAGGAAACGGC
AGTTGTCTTTTGTCCTCAATGCCGTGAGGGATCTCAAGAACGGCTTGGAG
TACGACATGCGGACAGACGAGGAAAAGGAGAGGTTTTTGGCTGAGCAGGC
GGCTGCCGTGGCCAAGTGCAAGGAAGAGGGCGGGGAAATGGAGGGAGAGG
GAGACGAGGACGAAGAGGACGAGGAATCAGAAATGCAAATGGACTGATAG
AAGTCATTGCATGTCATTAAAACATGTACATAACAACTCTCATTGAGTGT
CTTGACGGTACCAGACACCGGCATTCCCCCCCCCGGCAGG back to topCoding sequence (CDS) from alignment at KK037249.1:296884..297923- >rna8569 ID=rna8569|Name=rna8569|organism=Nannochloropsis gaditana|type=CDS|length=1476bp|location=Sequence derived from alignment at KK037249.1:296884..297923- (Nannochloropsis gaditana)
ATTGACAAAGCGGAAGCGGTGTTCGCCACCCTGCCCCGGGAGCGGGAGGA
ATTCGAAGTCTATTCCGACACGATAGCCCAACAGACAGCTCGCGTGGAGG
CAGAGATTGTCGCTCTCAAGGAGAGATTGGTCGTGGAACGTGCAATTCGT
CTGCAGCGCGAAGAATACGAGGCGCTGGCAAAGCTGGTGAACAAATATCC
AGCCAAAGCACAGACGACGGTGGGACAGACCAAAGTGGCGGCAGAGATAG
CAGCTTTGGAGGAAGAGAAAGGAAGGCTTGGCAAGGCAGTGGCCATGAGG
AAACGGCAGTTGTCTTTTGTCCTCAATGCCGTGAGGGATCTCAAGAACGG
CTTGGAGTACGACATGCGGACAGACGAGGAAAAGGAGAGGTTTTTGGCTG
AGCAGGCGGCTGCCGTGGCCAAGTGCAAGGAAGAGGGCGGGGAAATGGAG
GGAGAGGGAGACGAGGACGAAGAGGACGAGGAATCAGAAATGCAAATGGA
CTGAATGATTGACAGGAAGATATTTGAGGACCGATTGACGTACAAAGAGA
CGACAATCACGGGCCACACTGCTGTCAGTCGTCTCGTGGCACGATTTAAT
GCTTTTGTCAACGCGGCCGTGAGCGCCCTCGGCGCATCCGACGCGAAGAC
TCCGGTTGGTCTGGGATGTGGGGAGAGAGAGACTGCGCTTGAGCAGTACG
ACGCCTTGGTCAAGGAGCTGACATTGATGCGGCTTGAGATTGACAAAGCG
GAAGCGGTGTTCGCCACCCTGCCCCGGGAGCGGGAGGAATTCGAAGTCTA
TTCCGACACGATAGCCCAACAGACAGCTCGCGTGGAGGCAGAGATTGTCG
CTCTCAAGGAGAGATTGGTCGTGGAACGTGCAATTCGTCTGCAGCGCGAA
GAATACGAGGCGCTGGCAAAGCTGGTGAACAAATATCCAGCCAAAGCACA
GACGACGGTGGGACAGACCAAAGTGGCGGCAGAGATAGCAGCTTTGGAGG
AAGAGAAAGGAAGGCTTGGCAAGGCAGTGGCCATGAGGAAACGGCAGTTG
TCTTTTGTCCTCAATGCCGTGAGGGATCTCAAGAACGGCTTGGAGTACGA
CATGCGGACAGACGAGGAAAAGGAGAGGTTTTTGGCTGAGCAGGCGGCTG
CCGTGGCCAAGTGCAAGGAAGAGGGCGGGGAAATGGAGGGAGAGGGAGAC
GAGGACGAAGAGGACGAGGAATCAGAAATGCAAATGGACTGAATGATTGA
CAGGAAGATATTTGAGGACCGATTGACGTACAAAGAGACGACAATCACGG
GCCACACTGCTGTCAGTCGTCTCGTGGCACGATTTAATGCTTTTGTCAAC
GCGGCCGTGAGCGCCCTCGGCGCATCCGACGCGAAGACTCCGGTTGGTCT
GGGATGTGGGGAGAGAGAGACTGCGCTTGAGCAGTACGACGCCTTGGTCA
AGGAGCTGACATTGATGCGGCTTGAG back to top
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