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Properties
| Property Name | Value |
|---|
| Product | abc subfamily abcg |
| Orig transcript id | gnl|cribi|Naga_100060g27.5477.mrna |
| Orig protein id | gnl|cribi|Naga_100060g27.5477 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:292288..296263 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8568 ID=rna8568|Name=rna8568|organism=Nannochloropsis gaditana|type=mRNA|length=1725bp
CATCCCCGGTGCCTTCATACGTGAACAGACAGGAGGAAGTAGAGGCCTAC
GGCCTGGGAGAAGTTTTCCACTTGTCGTCTGGATGCACCATCGTGGGGCG
ATACGCTGGCATTTCCTCATTTACTTCCTCCTCCTTCGGACGAGGTCTTT
TGTCGCGCTCTTATTCTTCTCTCTCACGAGCTTTTGGTCGGGTAGCGCGG
TCATAGCCTTTCAGTCAGTGTCATCACGGTGGCCGTGTCTTTTTTTCGTT
CGTCTGAATTCGTACCACGGCTATTCTTGGCAGCCCCGGATACCCGTAGT
ACCCCTCTCCCCCCTCTTCTCCTCCTCATCTACCTCTTCTTCACCTCCGC
CCGTCATGACCTTCAAGCCACCATCCCTCACCGAAATTACTGTAACCCCC
GATCTTTATGACGCCGTGCGCATTTATGCCATGTCGGACCTGCACGTGGA
CTATCGGAAGAATCTCGAGCTCTTTCAATATTGGTGTAGTCGTCCGGCCT
CCGGAAATAGCTTATCATCCCTTGCCCTAGAGCAGGAAAAAAGCGATCGG
ATATATTCCATCCTTCTTATTCCAGGCGACATCGCATCCAACCCAGCGAA
TTTCAAAGCCGTCTTGGCGGCCACTCGACGTCGATTTCATGCCACATTTA
TCGTCGCGGGCAACCACGACCTGTGGGTGAGCAACTCCTTGGCCGATCAG
GGCGTGGTCACCTCCATCGACAAGCTCGCCTGGATCCACCAGGTCGCGGA
GGGGAACGGGGACGAGCCAGAAGGGGAGGAAGATACAGAGGATGGGGTGG
GGGGGAAGGAGGAGGAGGGGGGATGGAGCGAGGAAGGGAAGGAGGGAGGC
CCCGGGGTGCCTGGAAGGAGGGGCGAGTCCGAGGGAGATTGGAGCGGGAC
ACCTGAACCGTCGGCGAATCCTGGCGGTTCTCGTGCCGCCCACCTTCCAA
TTTCTCCGTCCTCATCGTCGTCGCGACGGGGCAAAGTCTTCACAGGGCCC
GTGCGGTTTCATACCCCCCGTGGAGAGCGCCTCCTGATCCTCCCCCTCCT
CTCATGGTACCACGCGTCTTGGGACACTGAACCCGACCTCCCCGCCGAGG
TCGTTGCCGATTTGTACGAAGGCCGACCCACCTTCGAGCAACGTTGGGCG
GATTTCCGGTGTTGCAAGTGGCCGGAGGAGGTGCTTCAAGACCGGGAAGA
CTTCGTGTCCCTGCAGACGGAGAAGCAGGAATTGGCGGTCTGGTTCGCGC
GTCAAAACGAGATTTTTTTGGCCGATACGCGGGTGCGAGGGGAAGGTCCC
CCGGCGGAGAAAACGACAGTGATCTCCTTCTCGCATTTTCTGCCGCGAGA
GGAGCTCTGCCCCGAAAAACGCTTCCTCTTGGAGCCCATGTTGCCCAAGG
TGATTGGATCGACCCCCCTGCGAAAACAGGTAGAGGCGTTGCGGCCAGAT
CTGCATGTGTTTGGGCACACCCACATCCCCATTGACTTGACGGTGCAAGG
GATTCGATATTTACAATGGCCATTGGGGTCGGTGGGAGAACAAAGTCGGC
AGACTTACGAAATGGGCCGCAGAGGGCCGGTGCTCGTGTTCGATGAGGAA
AGGGGGGGCTTGGTCGGGACGATACCCACCCGGTGGGGCGCGCACTACCG
AGAAGCGGCTCGGAACGTGCTGGAAACGGAGTTGGCGCCTTGGGTGAAGA
AGTACTGGGAGCGAAAGTGAGGGGT back to topprotein sequence of rna8568 >rna8568-protein ID=rna8568-protein|Name=rna8568|organism=Nannochloropsis gaditana|type=polypeptide|length=803bp
MAPNAADEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILPGEPSTSHHHH
RHKSASPGKFSDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAW
DVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVM
GPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFY
PTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGG
RSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLR
GMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLA
SVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQ
NQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRM
DPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFA
REYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGP
KGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAG
VNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTV
TLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPP
FLAWLQHLSIVKYTLHALVLEAFAGQDIHCPPSLSHPGEGSDGGGLPGGA
RCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVLARQAMTV
KVR back to topmRNA from alignment at KK037249.1:292288..296263- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8568 ID=rna8568|Name=rna8568|organism=Nannochloropsis gaditana|type=mRNA|length=3976bp|location=Sequence derived from alignment at KK037249.1:292288..296263- (Nannochloropsis gaditana)
TGCTCTGCCCGGTCCATGATAGTCGGAGCAGCACGTGATGGTGTACAAAC
AAGGGAACTCAACCTAACCCTGCGCCTTGAGCACCAACGTTATCACAGTG
TGCGCATGCAGATGTGAAGGCTGACATATTTATGCCACGGCGCGTGTACA
ATGTTATTTGGTTGTAATGCAAGTGTCGACCGGGTCACAGGATCGGCTTT
GGAAGGAAAGTCTAAGAGAGGTTTGGGTCCGTGTCATCCTTCTAAATTAC
CGCCTTTCTTCCCCTCCGCACTCGTGCGACCGAAATTTTCATAGGCAAGA
ATCACAATCATTTGGCAGGGTGCCGCGGTAGGGGCAAAGGGCGAGCGTGA
GACTGGTTGTTCTTGGGATATTGTATCCTAGCGCGTCTCTGCCTTGTCAA
CCCCCCCTACCTTGCCTGTCAAGTTCACCACGACCTGCCCGTTGCCCAAT
CACGACTTGAAAGCGTCTTTCGACAGTCACACTATCCAGCGCATGGCCCC
AAATGCCGCAGACGAGGAGGATCGGCCCTCCCCGCCATTACTCGTCGTGT
CTGAGCCCCGCTCTTCCTCGCCCTCCGCCGACTGTACCCCCCCGCCAGGA
CACATACTTCCAGGGGAGCCATCCACTTCTCATCATCACCACCGCCACAA
AAGCGCCAGCCCTGGTAAATTCTCGGACGGCTCGGAAGGGATCAGCGTGG
AATCCACCGCCTCCACCTCGGCGGCCTCGCGGACACGGGAGGAAGAAGAA
GCGATCGGACGCGACCATTGCCTCGTCACTTCCTTGGCCTGGGACGTCAC
CTACTCCATCGCCGAGACCAAAGGCCAGCCAGGAGGCCGATGGCTCCCAT
GCCCGAGCCGGTCGGGAAAAAAGCGGAAGAAAAAAGTGATTCTCCACTCC
ATTGTCGGGCAGGCGGAGGCAGGAGACTTGCTGGCGGTCATGGGCCCGTC
CGGCTGTGGGAAGTCCACCTTTCTAAGTTGTCTGGCCCTGCGCGACCAAA
CGTTCCGCGGACAAATCTATTTGAACGAGGCCCCGGCCAGGAAGCAGTAC
CTGTCGATGGTGGGCTTTGTGGACCAGCACGACCTCTTCTATCCCACCCA
GACTGTGCGCGAGCACTTAGAGTTCCACGCAATGGTGCGGCTGGGGGCGC
AGGTACGCACCTCGGCCAAGATGGCCCGGATCCAAGAGGTGTTGATCGAG
CTGAATCTTAGCCATGTGTCCCACACGTACATTGGGGGCGGCCGGAGCGC
CGTGCGTGGCCTGTCGGGGGGGGAACGCCGACGTTTGTCGTTTGCCACGG
AGATGCTTTCGAACCCATCCATCGTGATCGCCGACGAGGCAACCACGGGC
CTGGACGCCTCCATGGCCAAGAGCGTCTGCCGGGTGCTGAGGGGCATGGC
GGACAGCGGGCGCCTGGTGGTGGCCTCCATACACCAACCGTCCTCCCAGA
CCTTCTCCACTTTTACCCACCTGATGCTCCTAGCGGGCCATGGCCACATT
GCCTACTACGGGCCCACGGCTAATCTGCTCGCCTACCTGGCCAGCGTCGG
CCTCCAATGTCCTCCGTACCACAACATGGCGGATTTTGCCGTCCGGTGCG
TCGCGGTGCCGCCGGGAGAAGGAGCCGAGGAGGCCGCCGCTCGGGTGGTC
AAGTTGTGCACAGCGTACACAGAGTCGGAGCTGGCGCAACAAAACCAGGC
CTGGAAGTTCAAGGCGAATTTGCATCCGGTACCCCCGGAAGCCACGCCCA
CGCATGCCGGGGGAGTGAATCGGAGTCATAAATACCAGCACCTAGGCCCG
GGGTGGGTGGGAGAGGAGGACTCGGTGGAGGAAGGGAGGATGGATCCGAT
AATGGCCATGACGGCAGGCCACCCGTCCTTGCAGTCCTTGACGGTCCTGG
AACGGGACGCGGCGGAGTCACTGGAGGGTCCCCACCCGCCGCCGAAGCGG
GGGGATGGTCGAGGGGGCCGGGGGCACGAGAAGGTGTTTGCCCGCGAGTA
CAACGCGTCGTGGACGACCCAGTTTGGGTACTCTCTGGTCCGGCAGCTCC
AGGCCCTGCAACGAGACAAGAAAATGTCCCTGGCCCGGTGCTTTGTGGGG
GTGGGAACGGGCTTGGTGATTGGCCTCGCGTTTCGGGGGCCCAAGGGCCG
GGAATTTGCGCAGGGCGGGATCACGGACACGCTGGGTTTGATGCTCACGT
CGGCCATCTTCTTGCTCATTACGAATTTCTTCCAAGTCGCTTTCACCCTC
CCGGGGGAGCTCCAAGTCTTTTTCCGGGAGCGGCTGGCGGGCGTGAACCG
GGTCAGCACCTACTACGTGGCCCATGTCGTTCAGTCCTTCGCCTTCCTCC
TGGTCTGGACCTTGGCCTTCTGCCTGGTCACCTTCCCTTTGGCCCTGAAC
GGCCTGACGCTCCGGCAGCTCGCGGTTTTCTTCTTGACCGTCACCTTGTC
GAACATTGCCTCTACGGCGTTGGGCTACGTGGTGGCTATCTCCACTCGGA
ACGAGGCGGTCGCCTTGGCACTGGTTCCTCCCATATCGCTGCCCATGGCC
CTGTTCGCCGGCTTTTTGGTGGAACTGAACACAGTGCCGCCCTTTTTGGC
CTGGCTGCAGCATTTGTCCATCGTCAAGTACACGCTGCACGCCCTGGTCT
TGGAGGCCTTTGCCGGCCAAGACATCCATTGCCCCCCCTCGCTCTCCCAC
CCAGGGGAAGGCTCAGACGGGGGAGGTTTACCGGGCGGGGCCCGTTGCGT
GTATCCCTCCACGCCCTCGGTGTTGCGACGATGCTCAGCAGACCAGCATA
CGTTGGAGGAGAATTTGATAATGCTGGCGGGGTTGGGCATAGGCTTGTTG
CTCTTGGGATATTTGGTGTTGGCGCGGCAGGCGATGACGGTCAAGGTGCG
ATAGGCGCGACGGAGCGAGGAAATAGGGGAAAGCGGGAGAATGATATGGT
GGAATCGCTTGAAGGGCCGGTGGGAGGACGGATGAGACGTCGGGAGCAAA
CTACTTGGTGTGACCAATCTATAAGAGGAGGACGGGGAGGGAGGGGGGGT
GTGAGGTGTGGAACGGGCGCAGGCACGTGTGTGGTGGTGGGAAAAGACCT
GGGGAAGGGCGGGGTCAGAGGCGGAGGTTTGTGCAGAGAGGATGTGGAGG
GTAGGAGATGCTATGAAGCCGAGATCGCCCGTCGAAAGAAGGGAATTACA
GTCCTTATTTGAGAGGGGAAAATGGAGCAAAGCGCGGGGAAAAGAGGAGA
GGAGGTGCTGGGAGGAGATGGCCTTGCCGATGGGACCGAGCGGGGACGTC
GTTGACCGTTGGCGCCGGCGACCCGACCCGACATTGATAGGAATATCTTG
TATCCTTTATGGACGGGTTTGCAATGAAGAGAAGATGGTCTCATACACGA
CACGCTCTCGAAAAATTCCACGGTGGCAATCGAGGTGGGAGGAGGTGTGG
AGGCCAAATTTTCTCTAAGGAAGAGCGGTGGAAGTAGGGGGCTGCACAGT
CAATCTCTTAAGCTTTGCACGAAAGTCGTGTGCGTGCGGCGGTAGTGCCA
ATGTTATTTTGCCAAGTGCAAATTTCTTGAAGAGGGCGCGTGATGAGTGT
AAGTGATACTTTGGGAGGGCAGCGACGGAGGAGGTGGGGAAATCTTGGAG
GTGAGTTGATTTTTGTACAGAGGCGTCGACTATTTGCCGTGGGATAATTG
AAACGGACGTAAAGGCCCAATCTAGCAGTAACCAAGCCTCTCTCGGTCTT
TTTCGGTCAAAATGGGAAAATTGGGAAAACAAAGCCAGGATAATTGAGGG
TTGCAGGGGTGCGTGTCATCGCGCAGTAACAGACGGGTACATGCGGAGCA
ATAATATATATATAGTTTTTGGATATTTATTACGGTCGTGGATGGCTAGC
AATTCCACGAGAGGTTGATTTCAATGGCCTAATCTCTATGTTTTAGGGCC
GGGAAAGTCACATACACATGTACCCT back to topCoding sequence (CDS) from alignment at KK037249.1:292288..296263- >rna8568 ID=rna8568|Name=rna8568|organism=Nannochloropsis gaditana|type=CDS|length=2412bp|location=Sequence derived from alignment at KK037249.1:292288..296263- (Nannochloropsis gaditana)
ATGGCCCCAAATGCCGCAGACGAGGAGGATCGGCCCTCCCCGCCATTACT
CGTCGTGTCTGAGCCCCGCTCTTCCTCGCCCTCCGCCGACTGTACCCCCC
CGCCAGGACACATACTTCCAGGGGAGCCATCCACTTCTCATCATCACCAC
CGCCACAAAAGCGCCAGCCCTGGTAAATTCTCGGACGGCTCGGAAGGGAT
CAGCGTGGAATCCACCGCCTCCACCTCGGCGGCCTCGCGGACACGGGAGG
AAGAAGAAGCGATCGGACGCGACCATTGCCTCGTCACTTCCTTGGCCTGG
GACGTCACCTACTCCATCGCCGAGACCAAAGGCCAGCCAGGAGGCCGATG
GCTCCCATGCCCGAGCCGGTCGGGAAAAAAGCGGAAGAAAAAAGTGATTC
TCCACTCCATTGTCGGGCAGGCGGAGGCAGGAGACTTGCTGGCGGTCATG
GGCCCGTCCGGCTGTGGGAAGTCCACCTTTCTAAGTTGTCTGGCCCTGCG
CGACCAAACGTTCCGCGGACAAATCTATTTGAACGAGGCCCCGGCCAGGA
AGCAGTACCTGTCGATGGTGGGCTTTGTGGACCAGCACGACCTCTTCTAT
CCCACCCAGACTGTGCGCGAGCACTTAGAGTTCCACGCAATGGTGCGGCT
GGGGGCGCAGGTACGCACCTCGGCCAAGATGGCCCGGATCCAAGAGGTGT
TGATCGAGCTGAATCTTAGCCATGTGTCCCACACGTACATTGGGGGCGGC
CGGAGCGCCGTGCGTGGCCTGTCGGGGGGGGAACGCCGACGTTTGTCGTT
TGCCACGGAGATGCTTTCGAACCCATCCATCGTGATCGCCGACGAGGCAA
CCACGGGCCTGGACGCCTCCATGGCCAAGAGCGTCTGCCGGGTGCTGAGG
GGCATGGCGGACAGCGGGCGCCTGGTGGTGGCCTCCATACACCAACCGTC
CTCCCAGACCTTCTCCACTTTTACCCACCTGATGCTCCTAGCGGGCCATG
GCCACATTGCCTACTACGGGCCCACGGCTAATCTGCTCGCCTACCTGGCC
AGCGTCGGCCTCCAATGTCCTCCGTACCACAACATGGCGGATTTTGCCGT
CCGGTGCGTCGCGGTGCCGCCGGGAGAAGGAGCCGAGGAGGCCGCCGCTC
GGGTGGTCAAGTTGTGCACAGCGTACACAGAGTCGGAGCTGGCGCAACAA
AACCAGGCCTGGAAGTTCAAGGCGAATTTGCATCCGGTACCCCCGGAAGC
CACGCCCACGCATGCCGGGGGAGTGAATCGGAGTCATAAATACCAGCACC
TAGGCCCGGGGTGGGTGGGAGAGGAGGACTCGGTGGAGGAAGGGAGGATG
GATCCGATAATGGCCATGACGGCAGGCCACCCGTCCTTGCAGTCCTTGAC
GGTCCTGGAACGGGACGCGGCGGAGTCACTGGAGGGTCCCCACCCGCCGC
CGAAGCGGGGGGATGGTCGAGGGGGCCGGGGGCACGAGAAGGTGTTTGCC
CGCGAGTACAACGCGTCGTGGACGACCCAGTTTGGGTACTCTCTGGTCCG
GCAGCTCCAGGCCCTGCAACGAGACAAGAAAATGTCCCTGGCCCGGTGCT
TTGTGGGGGTGGGAACGGGCTTGGTGATTGGCCTCGCGTTTCGGGGGCCC
AAGGGCCGGGAATTTGCGCAGGGCGGGATCACGGACACGCTGGGTTTGAT
GCTCACGTCGGCCATCTTCTTGCTCATTACGAATTTCTTCCAAGTCGCTT
TCACCCTCCCGGGGGAGCTCCAAGTCTTTTTCCGGGAGCGGCTGGCGGGC
GTGAACCGGGTCAGCACCTACTACGTGGCCCATGTCGTTCAGTCCTTCGC
CTTCCTCCTGGTCTGGACCTTGGCCTTCTGCCTGGTCACCTTCCCTTTGG
CCCTGAACGGCCTGACGCTCCGGCAGCTCGCGGTTTTCTTCTTGACCGTC
ACCTTGTCGAACATTGCCTCTACGGCGTTGGGCTACGTGGTGGCTATCTC
CACTCGGAACGAGGCGGTCGCCTTGGCACTGGTTCCTCCCATATCGCTGC
CCATGGCCCTGTTCGCCGGCTTTTTGGTGGAACTGAACACAGTGCCGCCC
TTTTTGGCCTGGCTGCAGCATTTGTCCATCGTCAAGTACACGCTGCACGC
CCTGGTCTTGGAGGCCTTTGCCGGCCAAGACATCCATTGCCCCCCCTCGC
TCTCCCACCCAGGGGAAGGCTCAGACGGGGGAGGTTTACCGGGCGGGGCC
CGTTGCGTGTATCCCTCCACGCCCTCGGTGTTGCGACGATGCTCAGCAGA
CCAGCATACGTTGGAGGAGAATTTGATAATGCTGGCGGGGTTGGGCATAG
GCTTGTTGCTCTTGGGATATTTGGTGTTGGCGCGGCAGGCGATGACGGTC
AAGGTGCGATAG back to top
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