EWM22109.1, cds8541 (CDS) Nannochloropsis gaditana

Overview
NameEWM22109.1
Unique Namecds8541
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:293360..295771 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22109.1
Productabc subfamily abcg
Orig transcript idgnl|cribi|Naga_100060g27.5477.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:293360..295771 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR003439ABC_transporter-like
IPR013525ABC_2_trans
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|585102529|gb|EWM22109.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 1644.02 bits (4256), Expect = 0.000e+0
Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 0
Query:    1 MAPNAADEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILPGEPSTSHHHHRHKSASPGKFSDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCPPSLSHPGEGSDGGGLPGGARCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVLARQAMTVKVR 803
            MAPNAADEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILPGEPSTSHHHHRHKSASPGKFSDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCPPSLSHPGEGSDGGGLPGGARCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVLARQAMTVKVR
Sbjct:    1 MAPNAADEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILPGEPSTSHHHHRHKSASPGKFSDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCPPSLSHPGEGSDGGGLPGGARCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVLARQAMTVKVR 803          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|553192960|ref|XP_005855679.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422293371|gb|EKU20671.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1081.24 bits (2795), Expect = 0.000e+0
Identity = 525/534 (98.31%), Postives = 525/534 (98.31%), Query Frame = 0
Query:    1 MAPNAADEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILPGEPSTSHHHHRHKSASPGKFSDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCF 534
            MAPNA DEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILP EPSTSHHHHRHKSASPGK SDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEE AARVVKLCTAYTESELA QNQAWKFKAN H VPPEATPTHAGG NRSHKYQHLGPG VGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCF
Sbjct:    1 MAPNATDEEDRPSPPLLVVSEPRSSSPSADCTPPPGHILPVEPSTSHHHHRHKSASPGKCSDGSEGISVESTASTSAASRTREEEEAIGRDHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEVAARVVKLCTAYTESELAHQNQAWKFKANFHLVPPEATPTHAGGGNRSHKYQHLGPGGVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCF 534          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|585110451|gb|EWM28107.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 327.791 bits (839), Expect = 5.473e-97
Identity = 225/710 (31.69%), Postives = 341/710 (48.03%), Query Frame = 0
Query:   97 SLAWDVTYSIAETK---GQPGGRWLPCPSRSGK--------KRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAA--ESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCPPSLSHPGEGSDGGGLPGGARCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVL 793
            SL+W +T  +       G+   + L    R G+        +R KK IL  +VG+AE G L+AVMG SGCGK++FL+C+++R+Q+F G I++NE     +Y S+ GFV Q DLF PT+TVREHL FHA++R    VR   ++ R++ ++  +NL HVS + +GG  S +RGLSGGERRR+SFATE+LS+P I+ ADE TTGLDASMAKSVC  LR +A  GRLV+ +IHQPSS  F+ FTH+ML+   G + Y GP   L AY          +    D ++ C   PP     +    +V L                      HP  P                       VG +      R+D ++A+    P   +++  ++D A  E L                 H     R + AS  TQF     R ++AL RD     A    G  TG+++GLA+            + +T GL   + + + +   +        E +VF RE  AG NRV  YY++     +A  +     F L+ + LA    +     +F   + L+ +   ++GY +A  T +  +A+A+ P + LP  +F+G + +L+    F  +L ++SI++Y   A+++  F       PPS +                   P+  +VL   +A    L  NL  LA   +   ++ YL+L
Sbjct:  129 SLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMT-QGRVIYMGPRTALAAY----------FERQGDPSLLC---PPRHNPADFFVTLVAL----------------------HPQDP-----------------------VGSQK-----RIDNLVAIYQASPERVAMSDWQQDVAFPELL---------------LYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEF-------PPSSTR-------------FTSEIPNQEAVLEGLNA--FPLSTNLWALASAAVVFRIIAYLIL 737          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 304.294 bits (778), Expect = 1.636e-88
Identity = 149/315 (47.30%), Postives = 206/315 (65.40%), Query Frame = 0
Query:   91 DHCLVTSLAWDVTYSIAETKGQPGGRWLPCPSRSGKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWK 405
            +H     LAWD + S+  TK +           SG   K+  IL ++ G  ++G ++AVMG SG GKSTFL C++LR+Q F G +Y+N  PA ++Y  M GFV Q DLF PT TVREHL FHAMVR+ + +    ++ R+++VL+E+ +SH   T IGG  +  RG+SGGE++RL+F TE+L+NPSIV ADE T+GLD+ M + VC  +R +AD G++++  IHQPSSQTF  FTHL+LLA  G I Y GP A L +Y +S+G+ CP +HN ADF +  +++ P E  E + AR+  L  AY  S LA  N AWK
Sbjct:  116 EHSQNLELAWDFSLSVKATKREA--------KLSGSYSKE--ILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGGPGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLLA-KGRIVYNGPMATLQSYFSSLGVICPHFHNPADFFINQISIVPTE-QEASMARLQSLWDAYENSNLAAGNMAWK 418          

HSP 2 Score: 138.658 bits (348), Expect = 3.420e-30
Identity = 84/303 (27.72%), Postives = 146/303 (48.18%), Query Frame = 0
Query:  495 HEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCPPSLSHPGEGSDGGGLPGGARCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVLARQA 797
            H+ V  + ++AS  TQF Y++ R +Q   R      A+    +  G+++G  + G       Q    + +GL     +F  + + F V    P E +VF RE L+G NRVS+Y++A  +      +++   F  + + +A    T  +   +  T+ L    +T++GY+++  T +EAVA AL P   +PMALFAG L++LNT+P +L WL   SI+KY    L++  +  +++ C  SL                 C + +  +V+         + E + +L  L I   LL +  L R++
Sbjct:  430 HKAVSMKHFHASTWTQFYYTMKRNIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTD---TQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQYTDRELSCVGSL----------------FCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAFFFLTRKS 713          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 278.87 bits (712), Expect = 2.153e-79
Identity = 196/607 (32.29%), Postives = 291/607 (47.94%), Query Frame = 0
Query:  126 KKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGR-SAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSG--RLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDP---IMAMTAGHPSLQSLTVLERDAAE-SLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQ----SFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLE 721
            KKRK   +L SI G+AE G   AVMGPSGCGK++ L CLALR + F G + LN       Y +  G+V Q +LF+P  TVREHL FHA+  L         +AR++ V+ E++L+ V    IGGG    V G+SGGER+RL+ ATE+L NP I++ DE T+GLD+ M + VC +L+ +A     RLV+A+IH PSS+ F+  +H+ LL  HG +AY+GP   LL +L  +G +CP Y N ADF +           E A+A+V+                                   AG        Q   PG VG ++    G +     + + ++G       + L RD A   +   H       G G       F      SW +Q             R + + LA   V V     +GL F     ++       +T G + +  + LLI +   V    P +  +  RE  AGVN    Y++   +     S AF+++  L + +V   LA + +      + F  V   N A+ ++GY+ +  + N  V L+++P    PM LF+G L E N+VPP L W+Q +S++ Y+   +VL 
Sbjct:   87 KKRKSLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFIL-----------ELASAKVI-----------------------------------AG--------QAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQ-------------RREYVGLA---VAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVG--LAPSAVAFGWYCLLFFIV---NFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLN 618          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 275.018 bits (702), Expect = 6.721e-78
Identity = 138/281 (49.11%), Postives = 192/281 (68.33%), Query Frame = 0
Query:  125 GKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLAS-VGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAW 404
            G K  ++ IL+++VG AE G +LA+MG SG GKS+ L C++LR+  F G +YL+  P    + S   +V Q DLF+ T TVREHL FHAMVR+  +V  + ++ R++EV+  +NL+ V+ + IGG ++ +RG+SGGER+RLS ATE+LS+P I+ ADE T+GLDA MA SVC++L+G+ADSGRLV   IHQPSS+ F  FTHLMLLA  G  AY+G  A  + Y AS +GL+CP ++N AD+ +  +AV       E A  V  +   Y  SELA+ N+AW
Sbjct:  113 GSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLA-RGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVA--VEDMLRVYQSSELARDNEAW 390          

HSP 2 Score: 99.3673 bits (246), Expect = 8.714e-18
Identity = 71/239 (29.71%), Postives = 122/239 (51.05%), Query Frame = 0
Query:  498 VFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITN-----FFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCP 731
            V +RE+ A+  TQF  S  R +++  R+  ++  R    +  GL++GL +     + F      + LG     A+FLLI N      F V+  +P ++ VF RE L   NR S+Y++   +    + +++   F  + + L        +  +F +T+ L   AS +LGY ++  T ++ VA+AL P + LPM+L+AG L   + VP +   L  +S++KY   A+VL  + G D + P
Sbjct:  408 VSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQ---QPFDSSATKNRLG-----AMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY-GSDKYTP 637          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|553179694|ref|XP_005852746.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422295790|gb|EKU23089.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 273.478 bits (698), Expect = 9.554e-77
Identity = 138/281 (49.11%), Postives = 192/281 (68.33%), Query Frame = 0
Query:  125 GKKRKKKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLAS-VGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAW 404
            G K  ++ IL+++VG AE G +LA+MG SG GKS+ L C++LR+  F G +YL+  P    + S   +V Q DLF+ T TVREHL FHAMVR+  +V  + ++ R++EV+  +NL+ V+ + IGG ++ +RG+SGGER+RLS ATE+LS+P I+ ADE T+GLDA MA SVC++L+G+ADSGRLV   IHQPSS+ F  FTHLMLLA  G  AY+G  A  + Y AS +GL+CP ++N AD+ +  +AV       E A  V  +   Y  SELA+ N+AW
Sbjct:  181 GSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFDGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLA-RGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVA--VEDMLRVYQSSELARDNEAW 458          

HSP 2 Score: 100.138 bits (248), Expect = 4.957e-18
Identity = 71/239 (29.71%), Postives = 122/239 (51.05%), Query Frame = 0
Query:  498 VFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITN-----FFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCP 731
            V +RE+ A+  TQF  S  R +++  R+  ++  R    +  GL++GL +     + F      + LG     A+FLLI N      F V+  +P ++ VF RE L   NR S+Y++   +    + +++   F  + + L        +  +F +T+ L   AS +LGY ++  T ++ VA+AL P + LPM+L+AG L   + VP +   L  +S++KY   A+VL  + G D + P
Sbjct:  476 VSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQ---QPFDSSATKNRLG-----AMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY-GSDKYTP 705          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|1022758499|gb|KZS04993.1| (ABC protein, subfamily ABCG [Daphnia magna])

HSP 1 Score: 268.085 bits (684), Expect = 1.065e-75
Identity = 192/672 (28.57%), Postives = 317/672 (47.17%), Query Frame = 0
Query:   84 EEEAI--GRDHCLVTSLAWD----VTYS---IAETKGQPGGRWLPCPSRSGKKRK--KKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQ---TFRGQIYLNEAPARKQYLSMVG-FVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEAT--PTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLM-LTSAIFLLIT-----NFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLV-TFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHCP 731
            E EA+  G +H ++  +  +    +TYS   +      P G    C S   KK    +K IL ++ G    G+ LA+MG SG GK+T L+CL  R+    T  G  YLN +      L+ +  +  QHDLF  T TV+E L F A++R+   +  + +M R++EV+ EL L+  + + IG    A++G+SGGE++RL+FATE+L+NP ++  DE T+GLD+ MA+++   L+ +A  G++VV ++HQPSSQ F+ F H++L+A  G  A+ GPT   + + AS G+ CPP HN ADF +  +A  PG+  EE   +V ++C  +  S++ +     +   +  PV   A    T +G  N   K       W                       S Q  TVL R                                  SWTT      V +++A+Q             +    ++ L ++G          ITD   +M +  A+F+L+T     N + V      E  +F R+   G+ R   Y +  ++    F L+++  F  +  +P+  N    R L    + V ++++A++  GY V+    +  ++ AL  P+ +P+ LF GF +   +VP +  WL+++S + Y   AL +  + G     P
Sbjct:    5 EYEAVQTGDNHDVIIPMTANSSQKITYSWENLTAYVNMPSGG---CFSSLCKKSPPVQKKILDNVSGVIHQGEFLAIMGASGAGKTTLLNCLTYRNTGKLTVVGDRYLNGSVVNPDSLARISSYNQQHDLFVGTLTVKETLHFQALLRMDKHLTYAERMNRVEEVIAELGLTKCADSLIGEPERAIKGISGGEKKRLAFATEILTNPQLIFCDEPTSGLDSYMAQNIIEALKNLASKGKVVVCTVHQPSSQVFAMFDHVLLMA-EGRTAFMGPTNKAIDFFASQGMPCPPNHNPADFFIYALASIPGQ-EEETNKKVKEICDNFESSDMGK--DLLQMAKDNQPVVASANGGDTISGPSNIQFKRSPYKASW-----------------------STQFSTVLWR----------------------------------SWTTVLREPRVLRMKAVQT------------IFVAALLALIYKGQT--------ITDANDIMNINGALFILLTNATFQNVYAVVNVFALEQPIFLRDHFNGMYRTDVYVICKMLADLPFQLLYSFLFIAIPYYPIGFNPDINRFLITVAIMVIVASVAAS-FGYFVSCLASSPKISSALSAPLIIPLMLFGGFFLNNGSVPIYFQWLRYISWLMYGNSALTITQWQGVSFDSP 591          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 266.159 bits (679), Expect = 4.563e-75
Identity = 127/280 (45.36%), Postives = 187/280 (66.79%), Query Frame = 0
Query:  130 KKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQTFRGQIYLNEAPARKQYLSMVGFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKAN 409
            KK IL  + G   +G+++A+MG SG GKS+ L C++LR+Q F G ++++  PA   +  +  +V Q DLF+PT TVREHL FHAMVR+   V+   K  R++ +L+++ L   S   IGG  S +RG+SGGER+R++ ATE+LSNP+I+  DE T+GLD+ MA++VC +LR +A++G++VV  IHQPSS TF  FTHL LLA  G +AY G     + Y A++G  CPP  N ADF +  +AV P +  E++ AR+  +  AY +S+L +QN+ W  K +
Sbjct:   66 KKTILEGVTGSVRSGNMMALMGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAERVESILLDVGLQGCSDALIGGASSLIRGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLLA-KGRMAYLGELPKAVDYFAALGHACPPNFNPADFFIEELAVVPSD-YEKSMARLRVVTDAYQDSDLRKQNEKWLSKVD 343          

HSP 2 Score: 114.775 bits (286), Expect = 9.956e-23
Identity = 67/229 (29.26%), Postives = 121/229 (52.84%), Query Frame = 0
Query:  502 EYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFLLVWTLAFCLVTFPLALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAGQDIHC 730
            EY A+  TQF  S  R +   +R+  ++ AR    +  G+++GL +     ++     + + +G+     +   I+  F V   +P +  VF RE LAG NRVS+Y++A  +    F +++ L F  + + +     T      F L + L    + ++GY ++   RN   A+A    + +PMALF+G L++++ + P+L  LQ LSI++YT HA+++  +A Q I+C
Sbjct:  360 EYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFD---QDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPINC 585          
BLAST of EWM22109.1 vs. NCBI_GenBank
Match: gi|321472548|gb|EFX83518.1| (ABC protein, subfamily ABCG [Daphnia pulex])

HSP 1 Score: 244.202 bits (622), Expect = 8.338e-67
Identity = 189/675 (28.00%), Postives = 307/675 (45.48%), Query Frame = 0
Query:  130 KKVILHSIVGQAEAGDLLAVMGPSGCGKSTFLSCLALRDQ---TFRGQIYLNEAPARKQYLSMV-GFVDQHDLFYPTQTVREHLEFHAMVRLGAQVRTSAKMARIQEVLIELNLSHVSHTYIGGGRSAVRGLSGGERRRLSFATEMLSNPSIVIADEATTGLDASMAKSVCRVLRGMADSGRLVVASIHQPSSQTFSTFTHLMLLAGHGHIAYYGPTANLLAYLASVGLQCPPYHNMADFAVRCVAVPPGEGAEEAAARVVKLCTAYTESELAQQNQAWKFKANLHPVPPEATPTHAGGVNRSHKYQHLGPGWVGEEDSVEEGRMDPIMAMTAGHPSLQSLTVLERDAAESLEGPHPPPKRGDGRGGRGHEKVFAREYNASWTTQFGYSLVRQLQALQRDKKMSLARCFVGVGTGLVIGLAFRGPKGREFAQGGITDTLGLMLTSAIFLLITNFFQVAFTLPGELQVFFRERLAGVNRVSTYYVAHVVQSFAFL-LVWTLAFCLVTFP---LALNGLTLRQLAVFFLTVTLSNIASTALGYVVAISTRNEAVALALVPPISLPMALFAGFLVELNTVPPFLAWLQHLSIVKYTLHALVLEAFAG---QDIHCPPSLSHPGEGSDGGGLPGGARCVYPSTPSVLRRCSADQHTLEENLIMLAGLGIGLLLLGYLVL 793
            +K IL ++ G    G+ LA+MG SG GK+T L+CL  R+       G+  LN A      L+ + G+V Q DLF PT TV+EHLEF A++R+   +    +M R+ EV+ EL L    +T IG     V+G+SGGER+RL+FA+E+L+NPS++  DE T+GLD+ MA+++ +VL+ +AD+G+ VV +IHQPSS+ F+ F  ++L+A  G  A+ G                P    ++ FA++ ++ P                        +  N A  +   L  VP +   +          Y            S E G+   I+ +   + SL S    E + AE                     KV    Y ASW  Q      R + ++ R+  +   +    +    +I   ++G          I   L + LT+  F   +N F V   +  EL +F RE   G+ R   Y+++   +SFA L L   L F  ++ P   + LN    R      + + ++N+AS+  G++V+       +ALA+ P + +P+ LF GF +    VP +  W++++S   Y   AL +  ++G    D  CP            GG+  G         ++L +   +      ++  L  L +GL +LG+L L
Sbjct:   82 QKRILDNVTGCVRPGEFLAIMGASGAGKTTLLNCLTFRNTGQLKVSGERNLNGAKVNTDTLARISGYVQQDDLFIPTLTVKEHLEFQALLRMEKHLSYKERMIRVDEVINELGLKKCQNTVIGNPERGVKGISGGERKRLAFASEVLTNPSLMFCDEPTSGLDSYMAQNIVQVLKNIADTGKTVVCTIHQPSSEVFAMFDRILLMA-DGRTAFLG----------------PASDALSFFALKGLSCP------------------------SNYNPADFYIHTLATVPGQEEESKKKNREICDAYS-----------SSEAGQQ--ILKIAQANRSLNSTESQEFELAEV--------------------KVNRTPYKASWLAQLRAVFWRSVISVFREPMVIRVKIIQTIFLSALIAAIYQGQSLLLDDVRNIQGALFIFLTNMTF---SNVFGVVNAITAELPIFLREHFNGMYRTDVYFIS---KSFADLPLFIILPFIFISIPYFAIGLNPAADRFFIASGIIILVANVASS-FGFMVSCIAGTTDIALAIAPALVIPLLLFGGFFLSNEDVPVYFDWMRYISWFMYGNEALSINQWSGVTFNDTGCP------------GGVCTG--------EAILEQFQFNPDYFGRDIWCLVALIVGLRILGFLGL 655          
The following BLAST results are available for this feature:
BLAST of EWM22109.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102529|gb|EWM22109.1|0.000e+0100.00abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553192960|ref|XP_005855679.1|0.000e+098.31abc subfamily abcg, partial [Nannochloropsis gadit... [more]
gi|585110451|gb|EWM28107.1|5.473e-9731.69abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102173|gb|EWM21831.1|1.636e-8847.30abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585106124|gb|EWM24607.1|2.153e-7932.29abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585110513|gb|EWM28168.1|6.721e-7849.11abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553179694|ref|XP_005852746.1|9.554e-7749.11abc subfamily abcg, partial [Nannochloropsis gadit... [more]
gi|1022758499|gb|KZS04993.1|1.065e-7528.57ABC protein, subfamily ABCG [Daphnia magna][more]
gi|585102296|gb|EWM21944.1|4.563e-7545.36white [Nannochloropsis gaditana][more]
gi|321472548|gb|EFX83518.1|8.338e-6728.00ABC protein, subfamily ABCG [Daphnia pulex][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8568rna8568Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications