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Properties
| Property Name | Value |
|---|
| Product | membrane-associated 30 kda protein |
| Orig transcript id | gnl|cribi|Naga_100064g8.4106.mrna |
| Orig protein id | gnl|cribi|Naga_100064g8.4106 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:261656..263608 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8556 ID=rna8556|Name=rna8556|organism=Nannochloropsis gaditana|type=mRNA|length=2628bp
CAGGTCGGGCGGTGTTGTTGAAAATGTTCCCGGAGGGATCCATGGCACGA
TGAACAAAGGAATGAAAGGCTCTGTTTGTAGCGTAGTGCGCCGGCAAAGA
CTGGTTTGGGCACGGCTTTTCCACTTGTTGATCTCCCGTCCCGCCTCACA
TTGTCCCCCCCCCCTTCTTTCTACAGGTAAAATAGGACGGAAATACCAAG
AAGCCCGAAATTCTGCCCTCGTTCAGGGCAATTTTCCGTGACTCACCGGT
TGCTGGTGTTGCCAGTCTTCCTGCCACGTCAAATTTTGTCCACTTGACAT
GGCCGACGGGTCTTCGGGGGGATGCGTCTGGCGGCAACCTGAGGATGGCG
CCGGCCCAGACGTCGGGCCCCTGGGCATAGACTATCTCTACATGTACCAC
TGCGGATTCAAGGAGAATGGATGGTTGTTTTTTCCATGCTTGTTGGCATG
GGGATGTTTCGTCACCTACTTGATGGGACACACGGCAGATGCCTATTTCT
CCCCTACCTTGGCGACACTTTCCGACAAGTTGAACTTAACCTACGATGTG
GCCGGCGTCACATTCCTAGCCTTGGGCAACGGTGCTCCCGACGTGTTCTC
CTCCATCGCCGCCTTCTCGTCCTCGGACCCCTCCGTGGTCCTGGTCGGCG
TCTGCGAGATCCTGGGGGCCGCGGTCTTTGTCACCAGCATCGTGGTTGGA
GCCGTCGCCCTCCTCCACCCGGCCACCGTGCGTCCTCAGGCCTTCGCCCG
CGACATATTCTTCCAGGTCCTGGCCAATATCCTCCTCACGGCCTCGGCGC
TCTACGGGCGGGTCACCTGGGGCCTGGGCCTCGTCTACATCGCCCTTTAC
GCCACATATGTGCTGGTGGTGCTGTACCTTGACCGGGCCCGAAAGAGGGC
GATGGCGGCGTCCTCTTTGTTTCTGAATGTGAATGGAGACGAGGGAAGGG
AGTGTGGGGCGAGCCTGGAGGGAGGGGCGGGTGCCTCCGGGGTTACCTCG
GCCTTTTGGTTCACCCCCTCGGACATTTCGGAGTTCCATCGGGCGACCGA
AACGGCCAGCGTGCACAAATTGACGCACGATTTCCTCCTGTTGGACGAAG
ACGAGGTGTCGAGCGAGAGCGAGAGCGAAGGAGAGGAGGAGGAAGGAGAG
GCACCCCGGATGGAGGAAGGGCAGGAAGAGCGTTCCGAACGAAAACGACG
GCGGAACCAAAACCTGGAGGCGGGGAGACATCCTTTCACCCACAGTTTGA
TCAGCGAGTACTTCATCGACGAGGGAGGCTCGGAGGCGAGGGCATGTTTG
GATGGTAAAGACCTGCTCGCGTCCTCCCCTCCCTCCGCCCCTACCTCGGA
GGAAGGCCGCTCCCGACAGCCTCTCACATCGCAGACGACCCCATCCCCCT
CCAGTCGCCACAGCCCGCACAGCAGGAGCAGCGGCCAGACAGCCGGTGTC
AGCAGCACCAAACGTTCCTTCACTCCCTTCTCCACGGCCCTGGGAAAGGA
GGAAGCCTACCGGGTCTCTGCCTCTTCCCTTAACGAAAACTCTCTCCCTC
TCGCCTCCACGTCCCCCTCCACCGGGCAGAAAGTACGCGTCTTCCGCCCT
CCTTGCTCCCCCTCCGTCCCCGTCCATCGTCATCGGCGGCACAATTCGGT
CTGGGACAATATGTACTGGCACCAGTGGCGCCTCCGTAGGGCTCTGCTCC
GGGAAGTTCATGCCTCGCAATTCCTGGTTCAGTCCCTCCCCAAGAAAGTC
TTCACCCTCCTGCATTTTCCATTTTTGCTCGCCCGGAACTTGACGATCCC
CCTGGTGGAAGAAGAAGCCTGGTCACGACGGTACGCCTCTTTGTGTGCCG
TGTTTGCCCCTTTGTTCCTTCTCCAGGCCAGTGGGAATTTGACGGCCACG
GTCGGTCAAGGTGCCTTTCCCGTGCCGCTGATAGTGCTGGCGGTAGGGGT
GGCAGGGGCTATTTTTATCCGGCAGACCACGCACGTGTCCCGCCCGCCCA
CGGCTCACCCTTACGTACTCGCCTTGGCCGTGACGGGTTTCGTCATGTGC
TCCGCCTGGATCTACGCGATCGCGGCGGAGCTGGTGGCGGTCGTGACGGC
CTTGGGAACACTCCTCTCCCTCCCTCCTTCCCTCCTGGGTTTAACACTCC
TGGCATGGGGCAACAGTGCCGGAGATTTAATCGCGAACATGGCAGTGGCA
CGGGCCGGGCTGGGGGACATGGCCATTGCGGGTTGCTTCGCAGGGCCTAC
GTTTAATCTGTTGATGGGATTGGGCTGCTCCTTCCTGTGGAAAGTTTTCC
GGACCGGTCCCTTTAGTCTGAATTTTGACGACAGCGCCTACATCTCCTTG
TCCTTCTTATACCTGGCTCTGGGCACTAATTTGGTAGTGGGGTATTGCAG
TGGTTTCCGAGTGGGCAAGGGGTTGGCGTGGCCCTTGATCATATTGTATG
TTACGTACACCCTCCTGCAGGTGCTGCTGATCGGGAAAGGGCTGCGCAAG
GGAGACGCCTGAGAAGGTAAGGCGTAAATAAATGGCGCGAAGGCAAACTG
TGCCGGTGTATATTGTACTGGTAGTGTGTCCACATTAAACTTTTAAAGAA
AGTATGAAAACTATGCGGCAAACAAGGG back to topprotein sequence of rna8556 >rna8556-protein ID=rna8556-protein|Name=rna8556|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MTPMKTTIVLVVLAVVGLAFCPTKVRAFRPTSFLPALHSKFPTATPRPLR
TRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKI
RQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSR
RQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARA
RTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSD
SSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSE
LEALRKEMGQR back to topmRNA from alignment at KK037249.1:261656..263608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8556 ID=rna8556|Name=rna8556|organism=Nannochloropsis gaditana|type=mRNA|length=1953bp|location=Sequence derived from alignment at KK037249.1:261656..263608+ (Nannochloropsis gaditana)
CGTGGCAGGAAGACTGGCAACACCAGCAACCGGTGAGTCACGGAAAATTG
CCCTGAACGAGGGCAGAATTTCGGGCTTCTTGGTATTTCCGTCCTATTTT
ACCTgtagaaagaaggggggggggacaatgTGAGGCGGGACGGGAGATCA
ACAAGTGGAAAAGCCGTGCCCAAACCAGTCTTTGCCGGCGCACTACGCTA
CAAACAGAGCCTTTCATTCCTTTGTTCATCGTGCCATGGATCCCTCCGGG
AACATTTTCAACAACACCGCCCGACCTGGGGCACAACCCTTTTTATAACT
CTCCTGGGGTAAGCATTCATCGCGACACCCGTCTGCAGCGTCTGAGCGAG
CCGGAGACAAGTATCTAGACGAGGACCGTCGTCCTTACCAGATCAGAAAC
ACCAGGCACAAGCGCCCAGAGCGCCAGGAACCACGTCCCACGGTGGCTGG
TTTTCTTGTCCATGGCGTGCCATGCTGTATTTCTCATGTTTCTCTTTCAC
AGCACAGAAAGTTGCGAGCCCTCCTGGGCATTCTTTCCATCGTGCAGTCT
CCGTCTGCCGTAGCCGGAACTTTCGTTGCGTACCGTTACAACACCAACAG
CGTCAACACAACCATGACGCCGATGAAAACCACGATCGTTCTTGTGGTCT
TGGCCGTTGTGGGCCTTGCGTTCTGTCCGACAAAGGTGAGGGCGTTCCGA
ccgacctccttcctcccggcttTACACTCCAAGTTTCCCACCGCCACGCC
CCGGCCTCTCCGCACTCGGACCCATGCGGTGCAAATGAACCTAGCAGATC
GATTCTTCCGTGTTGTAAAAGCAAATTTGAATTCCGTGCTGCAGAATTTG
GAGGACCCTGAAAAGATTTTGGAACAAGCGGTCGAAGACATGCAAAAGGA
CCTGATCAAAATCAGGCAGTCTTACGCGGAGGTATCGGCCACGCAGAAGC
GGATGGAGCGTCAGAAAGAACAGGCTGAGAACTTGTCGAGCGAATGGTAT
AAACGGGCCCAGCTGGCATTGTCcaagggggacgaggagctggccaggga
ggcattgagcagacggcagcagcaagtgGAGGTGGTGTCGTCCCTGGGCG
AGCAAATGACGATCCAAGCGGGGGCGATTGACAGACTCTTCAACTCGATG
CAGCAGCTGGAAGCCAAGATTTCGGAAGCTAAGTCCAAGAAGGACCAGAT
GATTGCCCGGGCCCGCACGGCGAAGACAAGCGAGAAGGTCAACGACATGC
TCTCCTCGGTGTCCGGAACTTCAAGCATGGACGCCTTCGAAcggatgaag
gagaaggtagAAATGCTGGAAAGCAAGGCTGAAGTGGCGGGGCAGTTGGC
GGGTGTCTCAGATTCTTCCTTGGAAGGGAAGTTCAAGTTGTTGGGGGAGA
GCAGTGCGGTGGATGACGAGTTGTCGAAGATGAAGGGCATGATCGGacaa
ggggagaggaaaagcgcAGGTTTCTTGCCTCCGGggatggcggaggcaga
ggtTGACTCTGAGTTGGAGGCCTTGAGAAAGGAAATGGGCCAGCGAtgaa
cgaggagaaggggagacgTCGAGGGTGagaagcgggggaaggggggacag
aGGAATTCGGGGGCATCACTTTGCTCTTGTTGGCTGTATATCGCGGGTGG
CAGAGTGGTGATAAAGTCTGATGTCCGAGTAGGTAGCTTTGTCGGAGCCC
ATGGAAGGACGTATGAACGGTAGATGAGAGAGGGCAGACTCGCGGGCCTA
CGCACAGGCATTGGCATGTTACACTTTACGTTTGTTCATTTTTGGGGCAT
GTTTTAAGAAGGCCAGATAGAAGAAATGTACACTCCTTCGCCGCATCACT
GCGGTGCaactcctttccctcgctttccctcctctcccgggcctCAGAGC
AAGATCTTATACTTCTCCGAGGGGGGCACCGCGTTCACCACGACCCGGCC
GTC back to topCoding sequence (CDS) from alignment at KK037249.1:261656..263608+ >rna8556 ID=rna8556|Name=rna8556|organism=Nannochloropsis gaditana|type=CDS|length=936bp|location=Sequence derived from alignment at KK037249.1:261656..263608+ (Nannochloropsis gaditana)
ATGACGCCGATGAAAACCACGATCGTTCTTGTGGTCTTGGCCGTTGTGGG
CCTTGCGTTCTGTCCGACAAAGGTGAGGGCGTTCCGAccgacctccttcc
tcccggcttTACACTCCAAGTTTCCCACCGCCACGCCCCGGCCTCTCCGC
ACTCGGACCCATGCGGTGCAAATGAACCTAGCAGATCGATTCTTCCGTGT
TGTAAAAGCAAATTTGAATTCCGTGCTGCAGAATTTGGAGGACCCTGAAA
AGATTTTGGAACAAGCGGTCGAAGACATGCAAAAGGACCTGATCAAAATC
AGGCAGTCTTACGCGGAGGTATCGGCCACGCAGAAGCGGATGGAGCGTCA
GAAAGAACAGGCTGAGAACTTGTCGAGCGAATGGTATAAACGGGCCCAGC
TGGCATTGTCcaagggggacgaggagctggccagggaggcattgagcaga
cggcagcagcaagtgGAGGTGGTGTCGTCCCTGGGCGAGCAAATGACGAT
CCAAGCGGGGGCGATTGACAGACTCTTCAACTCGATGCAGCAGCTGGAAG
CCAAGATTTCGGAAGCTAAGTCCAAGAAGGACCAGATGATTGCCCGGGCC
CGCACGGCGAAGACAAGCGAGAAGGTCAACGACATGCTCTCCTCGGTGTC
CGGAACTTCAAGCATGGACGCCTTCGAAcggatgaaggagaaggtagAAA
TGCTGGAAAGCAAGGCTGAAGTGGCGGGGCAGTTGGCGGGTGTCTCAGAT
TCTTCCTTGGAAGGGAAGTTCAAGTTGTTGGGGGAGAGCAGTGCGGTGGA
TGACGAGTTGTCGAAGATGAAGGGCATGATCGGacaaggggagaggaaaa
gcgcAGGTTTCTTGCCTCCGGggatggcggaggcagaggtTGACTCTGAG
TTGGAGGCCTTGAGAAAGGAAATGGGCCAGCGAtga back to top
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