EWM22149.1, cds8529 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|585102570|gb|EWM22149.1| (membrane-associated 30 kda protein [Nannochloropsis gaditana]) HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0 Query: 1 MTPMKTTIVLVVLAVVGLAFCPTKVRAFRPTSFLPALHSKFPTATPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMGQR 311 MTPMKTTIVLVVLAVVGLAFCPTKVRAFRPTSFLPALHSKFPTATPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMGQR Sbjct: 1 MTPMKTTIVLVVLAVVGLAFCPTKVRAFRPTSFLPALHSKFPTATPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMGQR 311
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|298708699|emb|CBJ49196.1| (Probable membrane-associated 30 kDa protein, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 321.242 bits (822), Expect = 2.859e-105 Identity = 160/255 (62.75%), Postives = 208/255 (81.57%), Query Frame = 0 Query: 55 AVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMG 309 A+QMNLADRF RV KANLN++LQ EDPEKILEQAVEDMQKDL+KIRQSYAEVSATQKRM+RQK++A+ L++ WY RAQLAL GDE LAREAL+RRQQQ++ S+G QM Q A+D+L +SMQQLEAKI+EAK +K+ +IARARTAKT+ +VNDML S++GT+SMDAF+RM EKVE LE+ AE+AG+L+G + SLEG+FK L ++A+DDEL++MKG++ ++ LP + V+SEL+ +++EMG Sbjct: 128 ALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQLDTSGSMGMQMDAQGQALDKLRDSMQQLEAKITEAKGQKETLIARARTAKTTTQVNDMLGSITGTTSMDAFDRMTEKVENLEANAEIAGELSGATSVSLEGQFKALEGNNAIDDELARMKGVL-PSKKGPTPQLPS--SSPAVESELDQMKREMG 379
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|219117245|ref|XP_002179417.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409308|gb|EEC49240.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 303.523 bits (776), Expect = 3.396e-99 Identity = 169/324 (52.16%), Postives = 224/324 (69.14%), Query Frame = 0 Query: 4 MKTTIVLVVLAVVGLAFCPTKVRAFRP-----TSFL-PALHSKFPTATPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEV--------AGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIG----QGERKSAGFLPPGMAEAEVDSELEALRKEMG 309 ++ T+ +A + LA AF P ++FL P++ PR T + + MNL DRF RV K+NLN++LQNLEDPEKI+ QAVEDMQ DL+K+RQSYAEV+ATQ+R+ +QKEQAE +S++WYKRAQLAL G+EELAREALSRRQQ + S+L +Q+ +QA +ID+L+ MQ LE KI E+KSKKDQM+ARARTA++++KVNDML V+G +SMDAF RM+EKVE LE+ A+V A L G + SSLE +FK L SS+VDDEL KMKG++G G++K G A+ VD EL ++K+ G Sbjct: 2 VRFTLHATTVASMLLAGSLYGTSAFAPVHRSQSAFLAPSI------PLPRAASTSSSTLHMNLFDRFQRVAKSNLNNILQNLEDPEKIMNQAVEDMQADLVKVRQSYAEVTATQRRLLKQKEQAEAVSNDWYKRAQLALQAGNEELAREALSRRQQTADEASNLQQQIDLQAASIDKLYEGMQVLEKKILESKSKKDQMVARARTAQSTQKVNDMLGGVTGKTSMDAFSRMEEKVEALEAAADVSAEMGALGANALPGSAASSLEQQFKALESSSSVDDELKKMKGLLGGAKDSGDKKETSGSSAG-ADPAVDDELAKMKKDAG 318
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|676380005|ref|XP_009033281.1| (hypothetical protein AURANDRAFT_19943 [Aureococcus anophagefferens] >gi|323456342|gb|EGB12209.1| hypothetical protein AURANDRAFT_19943 [Aureococcus anophagefferens]) HSP 1 Score: 291.197 bits (744), Expect = 3.660e-95 Identity = 155/252 (61.51%), Postives = 192/252 (76.19%), Query Frame = 0 Query: 58 MNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLA-GVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKS--AGFLPPGMAEAEVDSELEALRK 306 MN+ DRF RV KAN N++L DPEK+L QAV+D+QKDL+ IRQSYAEV ATQKRM+RQK+QA+ L+ EWYKRAQLAL KGD+ELAREALSR+ QQ + + L EQ+ +Q ++ +L++SM QLE+KISEAKS KDQ IARARTAKT+ KVNDMLS V G+SSMDAFERMKEKVEMLE++AEV+GQL G S + +E KFK L SAV+DELS MK + G + A LP +A V+ EL ++K Sbjct: 1 MNMFDRFKRVAKANANNLL-GKRDPEKVLNQAVDDLQKDLVTIRQSYAEVMATQKRMQRQKDQADQLADEWYKRAQLALEKGDDELAREALSRKTQQTDASAGLDEQIAVQTDSLAKLYDSMTQLESKISEAKSMKDQYIARARTAKTATKVNDMLSDVGGSSSMDAFERMKEKVEMLETQAEVSGQLQFGASTADMESKFKALEAGSAVEDELSAMKRQLTAGSDAAPEAKALPATPGDAAVEDELAKMKK 251
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|1210517598|dbj|GAX23513.1| (phage shock protein A [Fistulifera solaris]) HSP 1 Score: 287.73 bits (735), Expect = 3.062e-93 Identity = 151/293 (51.54%), Postives = 215/293 (73.38%), Query Frame = 0 Query: 20 FCPTKVRAFRPTSFLPALHSKFPTATPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGV---SDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMG 309 F T + +F HS F + + + + A+QMNL DRF RV K+NLN++L+NLEDPEKI+ QAVEDMQKDL+ +RQSYAEV+ATQ+R+ +QKEQ + ++ +WYKRAQLAL +E LA+EAL+RRQQQ++ +SL Q+ QA +ID+L+ MQ LE+ I +AKSKK+QM+ARARTA++++KVNDML+ ++G++SMDAF+RM+EKVE LE+ AE++ +++ S SSLE +FKLL +S+VDDEL+K+KGM+ + +S+ +A VD E E L+KE G Sbjct: 4 FGLTTLLLATANAFTVVPHSSFVSRPSVSVPSSSTALQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVTATQRRLLKQKEQCDAVAEDWYKRAQLALKASNEGLAKEALTRRQQQLDEAASLQSQIDAQASSIDKLYEGMQTLESAILDAKSKKEQMVARARTAQSTQKVNDMLTGLTGSTSMDAFKRMEEKVEALEAAAEISSEMSKALPGSKSSLEDQFKLLEAASSVDDELNKLKGMLNPAKEESSSSSAKSDNKA-VDDEFEKLKKEAG 295
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|1210527685|dbj|GAX13671.1| (phage shock protein A [Fistulifera solaris]) HSP 1 Score: 283.108 bits (723), Expect = 1.819e-91 Identity = 146/282 (51.77%), Postives = 211/282 (74.82%), Query Frame = 0 Query: 31 TSFLPALHSKFPTATPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGV---SDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMG 309 ++F H+ F + + + + ++QMNL DRF RV K+NLN++L+NLEDPEKI+ QAVEDMQKDL+ +RQSYAEV+ATQ+R+ +QKEQ + ++ +WYKRAQLAL +E LA+EAL+RRQQQ++ +SL Q+ QA +ID+L+ MQ LE+ I +AKSKK+QM+ARARTA++++KVNDML+ ++G++SMDAF+RM+EKVE LE+ AE++ +++ S SSLE +FKLL +S+VDDEL+K+KGM+ + +S+ VD E E L+KE G Sbjct: 15 SAFTVVPHNSFASRPSVSIPSSSTSLQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVTATQRRLLKQKEQCDAVAEDWYKRAQLALKASNEGLAKEALTRRQQQLDEAASLQAQIDAQASSIDKLYEGMQTLESAILDAKSKKEQMVARARTAQSTQKVNDMLTGLTGSTSMDAFKRMEEKVEALEAAAEISSEMSKALPGSKSSLEDQFKLLEAASSVDDELNKLKGMLNPAKEESSS-SSAKSDNKSVDDEFEKLKKEAG 295
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|397620704|gb|EJK65858.1| (hypothetical protein THAOC_13240 [Thalassiosira oceanica]) HSP 1 Score: 282.337 bits (721), Expect = 4.950e-91 Identity = 160/308 (51.95%), Postives = 210/308 (68.18%), Query Frame = 0 Query: 28 FRPTSFLPALHS-----KFPTA---TPRPL----------RTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQ--------LAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMG 309 FR TS L L S F T T RPL R + + MNL DRF RV K+N+N+VL++LEDPEKI+ QAVEDMQ DL+K+RQSYAE++ATQ+R+ +QKEQA+ L +WYKRAQLAL KG+E LA+EALSRRQQQ+E L Q+ +QA A+D+L+ MQ LEAKI E+K+KK+QMIARARTA+++++VNDML ++G +SMDAF+RM++KVE LE+ AEV+ + L G S S+E +FK+L SS+VD EL MK M+G S+ G VD ELE L++E G Sbjct: 3 FRTTSSLLVLTSLASVDGFSTVSSFTRRPLLVESQNYALRRPSSTVLSMNLFDRFSRVAKSNINNVLKSLEDPEKIMNQAVEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALGEDWYKRAQLALQKGEEGLAKEALSRRQQQMETSEGLQTQIDMQAQAVDKLYEGMQALEAKILESKAKKEQMIARARTAQSTQQVNDMLGGITGKTSMDAFQRMEDKVEALEAAAEVSAEMGSFDGKALPGSSAGSIESQFKMLEASSSVDKELEDMKKMLGS---TSSASKNDG-----VDDELERLKREAG 302
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|223995719|ref|XP_002287533.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976649|gb|EED94976.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 276.944 bits (707), Expect = 1.369e-89 Identity = 146/260 (56.15%), Postives = 195/260 (75.00%), Query Frame = 0 Query: 58 MNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSD--------SSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMG 309 MNL DRF RV K+N+N+VL++LEDPEKI+ QA+EDMQ DL+K+RQSYAE++ATQ+R+ +QKEQAE L+ +WYKRAQLALSKG+E LA+EAL+RRQQQVE + L Q+ +QA A+D+L+ MQ LEAKI E+KSKK+QM+ARARTA++++KVNDML ++G +SMDAF RM+EKVE LE+ AEV+ ++ +S SSLE +FK+L S+VD EL +MK M+G S + D ELE L++E G Sbjct: 1 MNLFDRFTRVAKSNINNVLKSLEDPEKIMNQALEDMQTDLVKVRQSYAEITATQRRLMKQKEQAEALAEDWYKRAQLALSKGEEGLAKEALTRRQQQVETMEGLKLQIDMQATAVDKLYEGMQALEAKILESKSKKEQMVARARTAQSTQKVNDMLGGITGMTSMDAFNRMEEKVEALEAAAEVSAEMGALSGNALPGSKASSLESQFKMLEAGSSVDKELEEMKKMLGSTSSASK-------SSGGTDEELERLKREAG 253
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|1072234996|gb|OEU19725.1| (PspA_IM30-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 268.085 bits (684), Expect = 2.815e-85 Identity = 147/292 (50.34%), Postives = 196/292 (67.12%), Query Frame = 0 Query: 1 MTPMKTTIVLVVLAVVGLAFCPTKVRAFRPTSFLPALH-SKFPTATPRPLRTRTH------AVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQ--------LAGVSDSSLEGKFKLLGESSAVDDELSKMKGMI 277 MT T VL V+A+ A +F H + A RTRT + NL DRF RV K+NLN++ LEDPEKI+EQA+E+MQ DL+KIRQSYAEV+ATQ+R+ +QKEQ E +S +WYKRAQLAL KG++ELA+EALSRRQ Q E + L Q+ QA A+D+L+ M+ LE +ISE+K++KDQM+ARARTA++++KVNDMLS V+G +SMDAF RM+EKVE LE+ AEV+ + L G + +E +F L S +VDDEL+KMKG++ Sbjct: 1 MTKFTLTTVLCVVALT----------ASSSDAFTVGPHFQQSAAANHAARRTRTAPSSSNVILHANLFDRFARVAKSNLNNLAGKLEDPEKIMEQALEEMQNDLVKIRQSYAEVTATQRRLMKQKEQCEAMSQDWYKRAQLALEKGNDELAKEALSRRQTQTEEANGLQSQLDGQADAMDKLYEGMKMLEKRISESKAQKDQMVARARTAQSTQKVNDMLSGVTGKTSMDAFTRMEEKVEQLEASAEVSAEMGSLGGNMLPGSDGAGIEAQFAALEASDSVDDELAKMKGLL 282
BLAST of EWM22149.1 vs. NCBI_GenBank
Match: gi|873237509|emb|CEL97660.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 260.381 bits (664), Expect = 1.691e-82 Identity = 150/302 (49.67%), Postives = 207/302 (68.54%), Query Frame = 0 Query: 13 LAVVGLAFCPTKVRAFRPTSFLPALHSKFPTATPRPLRTRTHAVQM-----NLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVS-GTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEM 308 L V +AF P +PT F T +P+R R + Q+ NL DRFFRVVK+N+ +V+ EDPEK+LEQAV DM +DL K+RQSYAE++ATQKR+ERQ+ A + ++EW +RAQLA+ KG+E+LAREAL R+ + V +L EQM +Q A+++L SM+ LE KI+EA+SKKDQ+IARARTAKT+++V DMLS + G +SMDAFERM+EKVE LESKAEV+ Q++ +S ++E KFK L E S VD EL K+K +G+ ++ A A EV++EL ++ +M Sbjct: 13 LVVSTVAFVP------QPT---------FVLQTAQPIRPRLRSTQVTMMADNLVDRFFRVVKSNVGAVISKFEDPEKVLEQAVIDMNEDLRKVRQSYAEITATQKRVERQRNAAADQAAEWMRRAQLAVEKGEEDLAREALQRKVTLSDQVKTLEEQMRLQGEALEQLQASMRTLEMKINEARSKKDQLIARARTAKTAQQVTDMLSGMGLGKTSMDAFERMQEKVETLESKAEVSRQMS-LSSGTVEDKFKSLEEGSGVDAELQKLKASMGKTSKEPAQL---KFASPEVEAELAQIKNKM 295 The following BLAST results are available for this feature:
BLAST of EWM22149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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