rna8523, rna8523 (mRNA) Nannochloropsis gaditana

Overview
Namerna8523
Unique Namerna8523
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1409
Alignment locationKK037249.1:158244..158990 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100153g6.4146.mrna
Orig protein idgnl|cribi|Naga_100153g6.4146
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:158244..158990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100153g6gene8261Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8523rna8523-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22172.1cds8496Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8523 ID=rna8523|Name=rna8523|organism=Nannochloropsis gaditana|type=mRNA|length=1409bp
CTCCATGCAGCAATCATGCCCCCTTTTAACTTTCCCGCCGCACGTTCCCT
TAGCTTCAAACATCTACTCGTTGCCTGAGTGAACACCCCTTCCCTCCATC
CCTCCCTCTCCTCCCTCCAGGTCCCTCCTCTGCGTCGAGATGGTGGCCCG
TCTCGACACCTTGTTGCAGGGCCGCACGTCACTCTACCGCGCCTGCCGTC
GACGCCCTACCGATCTCCTTTCCTCCACCCCTTCCTGGATCACCATGGCC
GACTTTGTGCGGGACATTGTCACGCGTGATACCCCCCCCGGGGGCCCTCC
CCCTCCGTCCCTCGCCCAAACCTCTCCCGTGCCCGCCCGCACCGATGGCC
CAGAAAGTGCTTCTTCTCCGTCGCTGCAGGCGTCCTGCGAGGCGTCATCG
AGCCAAACCACGGCAGGAAGGGAGGAAGGGAAGGAAGCAGGGAGGAGAGG
CGGGAGGGAATGTCCAGGGAAGAAGCGTGTAGGAGGGTCGGAGGCGGGAG
GGGAGGAGGAGAAGAGCTGGGAGGGAGCCGGCGTGAACTCGCGCAGGAGC
AAGAGAATAGCCAGGGGAGGTGATGAGGATGGCAACCGAATAGGTGGAAA
TGGAGACGGTGGGTCGTGGGAGAGGGGGTGGGAGGGGAAGAATGTGGTCG
GAGGAGAGGCTCCAGCGTTGGAGGAAGCGAGGGAGGTCGGGAAGGAGGGA
GGGGAGGAAGTCTGGGTTGGGGGGAGTCTCGGGGGCCCGGGGGAGGGAGG
GCAGGAAGGAGGGACTCAGGTCTCCGAGTCTCGGACGGCGTGGAGCGAGG
GCGAGGCGGAGGAGGAGGGAAGAAAAGAAAGCAAAGAGGGACGGGTCAAG
GACACAGCCGAGCAAGGACGTGTGGGCAAGGAGGGATCAGTCTCGGATCG
GTGTTTCTCGTCCCGTGGGAAGGCCCTTCCCTTCCGCTTGGCTGGTGCCG
AGGGTAGCGACCTAGCCGCCGGTCAAGTGAGTGAACAAAGGGAGGAGAGG
GTGGACACGGAGGCGTCGCGCGACCTGGGCGGCATTGGGAGGGACGTGCA
GGGGAAGGGCCATCAGAACAGGGACGATAAGGGAGAAGGCAGGGAAAGGG
GGGGTGAGGTACAGGTTTTCGACGAAGCTGAAGCGGTTGATGGGCTCGAT
ACGGCGGGTCTGAGCACTGGGGATATGATATGTCCCACGAAAATAGTGTC
GTGCGAAGAAGAGAGGGCTGGGGCGCCCGAGGACAGTGAGGGGGGCACCC
CTTCACAGTGAGAAGGGGACCTCGGTAGGTGAGTTTAGACGAAGGAAAAA
ATGCGTGAGTTCGAAGCAACGTGGGCACCTCACGCGTCAATGTTTGTCTC
CTTGTTCATTTGGCCACGAATGGTAGATTTCTCCCTTTATGCAATATTAC
TGAGTCTTT
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protein sequence of rna8523

>rna8523-protein ID=rna8523-protein|Name=rna8523|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISL
LAVRLDSLLDSLRVAADHAARARDSSSRLLSLCKEDPRVTALLPLLDQLQ
LQRRHDLTAYQEEVRQCTLALERHKELLGWSAGTHSSTAEQVGEMMPVLA
DAAMKM
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mRNA from alignment at KK037249.1:158244..158990-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8523 ID=rna8523|Name=rna8523|organism=Nannochloropsis gaditana|type=mRNA|length=747bp|location=Sequence derived from alignment at KK037249.1:158244..158990- (Nannochloropsis gaditana)
CTGGACTCACTTTTACAATGCACAGATGGTCGACGAAGAGGGTGGACATC
CTGGCCTTAGTGGAGCTCAGCAAGCATTTCCAGGGTTAGAAGCTCTCCTT
ACAGTCCCTTTCTCCTTCATCGCCAAATACACGCACAACAAAAAGTACGT
CGCGGGCGCCGAGGATGGTAAATTCGACGCGTGTCGCGTTCACATCCATC
ACATTTGACCTTGTTGATTGTTTGGGACACAGGGAGGCGGAGGCCCTGGT
TCAGATTTCCCTCCTAGCCGTCCGTCTGGATTCTCTGCTGGACTCCCTCC
GTGTCGCAGCCGATCATGCTGCGGTATGTCATCAGTGTCCTCCCTCTTCT
AAGCCCCCCCCCAAAGTCTCCACGCACTTAAATTTCCCTGACTTTCTGTG
CGCTTGTCTACCACTGCTTCAACCCCCATTGTGCCCACTGCCTTCCTTCC
CTCCCAGCGCGCCCGCGACTCCTCCTCTCGTCTCCTCTCCCTCTGCAAGG
AAGACCCTCGCGTCACCGCCCTCCTCCCCTTACTGGACCAGCTTCAACTC
CAACGTCGGCACGACCTGACCGCCTATCAAGAAGAGGTGAGACAGTGCAC
GCTCGCCCTGGAACGGCACAAGGAATTGCTGGGGTGGTCTGCGGGCACAC
ACAGCAGCACCGCGGAGCAAGTAGGGGAGATGATGCCTGTCTTGGCGGAC
GCGGCCATGAAAATGTGAGGGACTTGGCGAAGAGCCGGGTCGGAAAG
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Coding sequence (CDS) from alignment at KK037249.1:158244..158990-

>rna8523 ID=rna8523|Name=rna8523|organism=Nannochloropsis gaditana|type=CDS|length=1413bp|location=Sequence derived from alignment at KK037249.1:158244..158990- (Nannochloropsis gaditana)
CGCGCCCGCGACTCCTCCTCTCGTCTCCTCTCCCTCTGCAAGGAAGACCC
TCGCGTCACCGCCCTCCTCCCCTTACTGGACCAGCTTCAACTCCAACGTC
GGCACGACCTGACCGCCTATCAAGAAGAGGTGAGACAGTGCACGCTCGCC
CTGGAACGGCACAAGGAATTGCTGGGGTGGTCTGCGGGCACACACAGCAG
CACCGCGGAGCAAGTAGGGGAGATGATGCCTGTCTTGGCGGACGCGGCCA
TGAAAATGTGAGGAGGCGGAGGCCCTGGTTCAGATTTCCCTCCTAGCCGT
CCGTCTGGATTCTCTGCTGGACTCCCTCCGTGTCGCAGCCGATCATGCTG
CGATGGTCGACGAAGAGGGTGGACATCCTGGCCTTAGTGGAGCTCAGCAA
GCATTTCCAGGGTTAGAAGCTCTCCTTACAGTCCCTTTCTCCTTCATCGC
CAAATACACGCACAACAAAAACGCGCCCGCGACTCCTCCTCTCGTCTCCT
CTCCCTCTGCAAGGAAGACCCTCGCGTCACCGCCCTCCTCCCCTTACTGG
ACCAGCTTCAACTCCAACGTCGGCACGACCTGACCGCCTATCAAGAAGAG
GTGAGACAGTGCACGCTCGCCCTGGAACGGCACAAGGAATTGCTGGGGTG
GTCTGCGGGCACACACAGCAGCACCGCGGAGCAAGTAGGGGAGATGATGC
CTGTCTTGGCGGACGCGGCCATGAAAATGTGAGGAGGCGGAGGCCCTGGT
TCAGATTTCCCTCCTAGCCGTCCGTCTGGATTCTCTGCTGGACTCCCTCC
GTGTCGCAGCCGATCATGCTGCGATGGTCGACGAAGAGGGTGGACATCCT
GGCCTTAGTGGAGCTCAGCAAGCATTTCCAGGGTTAGAAGCTCTCCTTAC
AGTCCCTTTCTCCTTCATCGCCAAATACACGCACAACAAAAACGCGCCCG
CGACTCCTCCTCTCGTCTCCTCTCCCTCTGCAAGGAAGACCCTCGCGTCA
CCGCCCTCCTCCCCTTACTGGACCAGCTTCAACTCCAACGTCGGCACGAC
CTGACCGCCTATCAAGAAGAGGTGAGACAGTGCACGCTCGCCCTGGAACG
GCACAAGGAATTGCTGGGGTGGTCTGCGGGCACACACAGCAGCACCGCGG
AGCAAGTAGGGGAGATGATGCCTGTCTTGGCGGACGCGGCCATGAAAATG
TGAGGAGGCGGAGGCCCTGGTTCAGATTTCCCTCCTAGCCGTCCGTCTGG
ATTCTCTGCTGGACTCCCTCCGTGTCGCAGCCGATCATGCTGCGATGGTC
GACGAAGAGGGTGGACATCCTGGCCTTAGTGGAGCTCAGCAAGCATTTCC
AGGGTTAGAAGCTCTCCTTACAGTCCCTTTCTCCTTCATCGCCAAATACA
CGCACAACAAAAA
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Synonyms
Publications