EWM22172.1, cds8496 (CDS) Nannochloropsis gaditana

Overview
NameEWM22172.1
Unique Namecds8496
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:158847..158965 -
Alignment locationKK037249.1:158668..158758 -
Alignment locationKK037249.1:158273..158533 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22172.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100153g6.4146.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:158847..158965 -
KK037249.1supercontigKK037249.1:158668..158758 -
KK037249.1supercontigKK037249.1:158273..158533 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22172.1 vs. NCBI_GenBank
Match: gi|585102599|gb|EWM22172.1| (hypothetical protein Naga_100153g6 [Nannochloropsis gaditana])

HSP 1 Score: 315.464 bits (807), Expect = 6.741e-109
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISLLAVRLDSLLDSLRVAADHAARARDSSSRLLSLCKEDPRVTALLPLLDQLQLQRRHDLTAYQEEVRQCTLALERHKELLGWSAGTHSSTAEQVGEMMPVLADAAMKM 156
            MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISLLAVRLDSLLDSLRVAADHAARARDSSSRLLSLCKEDPRVTALLPLLDQLQLQRRHDLTAYQEEVRQCTLALERHKELLGWSAGTHSSTAEQVGEMMPVLADAAMKM
Sbjct:    1 MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISLLAVRLDSLLDSLRVAADHAARARDSSSRLLSLCKEDPRVTALLPLLDQLQLQRRHDLTAYQEEVRQCTLALERHKELLGWSAGTHSSTAEQVGEMMPVLADAAMKM 156
[Close]
BLAST of EWM22172.1 vs. NCBI_GenBank
Match: gi|553189612|ref|XP_005855039.1| (hypothetical protein NGA_0396700 [Nannochloropsis gaditana CCMP526] >gi|422294024|gb|EKU21324.1| hypothetical protein NGA_0396700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 143.665 bits (361), Expect = 8.738e-42
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 
Query:    1 MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISLLAVRLDSLLDSLRVAADHAA 70
            MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISLLAVRLDSLLDSLRVAADHAA
Sbjct:    1 MVDEEGGHPGLSGAQQAFPGLEALLTVPFSFIAKYTHNKKEAEALVQISLLAVRLDSLLDSLRVAADHAA 70
The following BLAST results are available for this feature:
BLAST of EWM22172.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102599|gb|EWM22172.1|6.741e-109100.00hypothetical protein Naga_100153g6 [Nannochloropsi... [more]
gi|553189612|ref|XP_005855039.1|8.738e-42100.00hypothetical protein NGA_0396700 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8523rna8523Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications