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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100645g3.7187.mrna |
| Orig protein id | gnl|cribi|Naga_100645g3.7187 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:144258..145098 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8517 ID=rna8517|Name=rna8517|organism=Nannochloropsis gaditana|type=mRNA|length=2820bp
ATGATAAACACCTGTAAGAGAGTTCGCTGGCTTCTAATAGGATTGATAGG
CTATCTGGAATGGAGCTGTTGTCGAAACAGAATAAGAAACCAGACAGCGG
CCTTTTCTTTCAAGCCTCACCCGTCCTGGAGCGGAGCCAATCTCCTGGAG
GGAAGTCGGGTGACGGCCTTCTTCTTTCATGCCTCACGGCATTATAATTT
GAATCAGCAAAAATATTCGTATAGACTGGTAGCAGATGGAGGACCGCTTG
CCTTCTCCGCGTTGACCTCGGGGGAGGGCGCCGGGTCGGGGAGTAGCAGT
AGCAGCAGCAGGAAGGATAGCAATAGTAGCAATAAGAGGAAAGTGACAGA
CAGGAAGCGCACCAGCGGTAGCGATGACGAAATCATGGGCACGGGTCGTA
GAGATGGAGGCCAGGGCCAGGAGCAGCATGTCCTTCCCTCCCACCACAAG
CAGCCCCCGCATCCGTCTCATCGGCATCAGCGACAGGAGGGATGGGGCCA
TCGGCGATGGCGGGAGGCTTCGGAGGGGCGCCAGCGGGGCGGGGTGGGAG
GAGCGGGGCAAAGTCAGTGGCCTGTGGGAGATCTGGAAGACGTGACGCAG
CTTCGCAACTTGGAGCGGACGGTGGAAGAGATCACCGGACCCTTGGATGC
CACTATGTGTCGCGGCGCCTTGACGGCCTGCTCGCGCCTGCACCAGCCCG
ACAAAGCCGCCTGGATCATCGAAAAAATGCGCGAACGCGGTCCTCCCCCG
GACGAGACTTGCTACGCGACGGCGATCGACACCTGTGCCCGCAAAGGTCG
ATGGTCGGTCGCGGTGTCCCTTTTGTCGACAATGCGGCACACGGACGGAT
TGGCGGTGGAAAACCCGACATTCGCCGTGGTTATGGCCGCCTGCCACCGG
GCGGGGCAAACCGAACGGGTCCTGGCCCTCTTGACGGAGATGGAGGAGGC
AGGGACAGGGGGAGGGAACCGGGGAGGAGCGTACGCCACGGCCGTCCACT
CTACCTTGGCCTCGAGAGAGTATGGGGAGATGCTGCGGGTGCTGGAGCGG
ATGATCGCGCAGGGTTTGGACGTAGAGGAACGTCTTATCCACCTGGTGAT
GGGCGATTTGGTGCGGGAGGGTCGCTGGCAGGAAGCGAAGGCCATGCTGG
ACCTCGCGCGGCGGGCGGGGAAGTTAACGGCCGATATCTACGTCAAGGCG
GTGGAGGCCTGCGTCCCAGAGGGGCAGTGGGCGGAAGCCTTTCGACACTT
GGAAACCATGCACCAGGAAGGCTTTCTCAGGCACGTCCGCGTCCCCCTCG
ATGGGGCGACCGCCTCGACCATGACGCTGTCGTCCTCCCCTCCTTCTGGA
CCTGCTACTTTGTCCTCTTCTCGTCCGTACTCCTCTCCCGGACTGGACAC
GACTGCCCCCGGCACTCTAGCAAATTACGGCAGTGGGGGCGCTGGCGCGA
GCAGCAGCGGGAGCCTGAGCTCCAGCAATGGGTTGCCCCACCACGGGGGG
GCGGGGTCCACGGGAAGCAATCCTCTTCCAATGGAAGCCAGCGAAGCCGC
CTTCCGCGGCGCCATGTCCGCCTGTCGACAGGCGGGGGACATCGAGCGGG
TCTTCTCCCTCCTGGACCTGCGGGACAGCTTGCTCGACAAGGACCTGGCC
GACTACGGGCATGGCCCAGACCCCGGGAGGCGGCAGGAAAGGCGGACCCC
TTCCATGGAACTCTATACCCTTGCCTTCGCCACGTGCTTTGAGCAAGAAC
GCTGGGACGCACTGCCCATCCTCCTCAAACACATGGCCGGGCACGGGCGC
CGTCCCGAGTCGGTGTTTTTCGACGAGCTGGTCCGGGTCTTGGCCACCTC
CCCCACGCGCCGACCCTCCCAGACCCTGGCCAGCCAAATCTCCGCCTTGC
GCCGCCTCCCCTTGAGCCAAGCCCAAGAGGGAGGGACGGGGGTCTCGGTG
CCCTGTTCCTCCACCCTTCTCCTGGTCTTCAACACGGCCATCCATGCCTG
CGCGGCGGGGGGCGATTGGCGGCTGGCCTTGGACCTCCTCCACGAGCTGA
AAGGCGAGAAATTACGGCCGGACTACTACTCTTTCCAAGCGGCCATTGCC
GCCTGCCAACGCGTGGGCGAGTGGGAGCAAGTCTTGTCCCTGCTCCAGGA
GATGGAGGCGTCGGGGTATCCCCCGACCCTGGCGTCCTACGAGGCGGTCA
TGAACGCCTGCTTGCGCGCCCAAGACTGGCCGCGGGTGGTGGAAATTTTG
GAGGGAATGAAACAGGTAGGGGTGAGTCCGGATGCTCATTTCATCGAGTG
GATTTTGAAGGCGTTGGCGAGCCGAGGGCAATGGCGCCAGAGCCTGGAGG
TGGTAGAGTCTTTGAAAGGAGACCGAAAGAAAGGCGGGAAGGAGGGCGGG
AAGGAGGGCGGGTTGTTGAACAACGTGGTTTATAACCTCGCCATCAAGGC
CTGCGACGCGGGCGGGGAATGGAAGGCGGCGGTGAAGCTGGTGGAGGACA
TGCGGGTCAAGGAAGGCATCCGTCCCGACCTGTACTCTTTCAACACCGCC
GTCTCGGCCTGTCAAAAAGCCGGCCAAGTCGTGCAGATCACGCGCTTGCT
CGGGCGCATGGAAATCTTGCAAATTCGCCCCAACACGTACACCTTTATCA
TGGCCACGGCCACCTGCCTGCAGACGGCGGCCTTTGACAAGCTTTTTGAG
GTCTTTGCCGCCATGGAACGGTGCGGATTGGACCCCGACGAACGGTTTTT
CCGCGTCCTTCTCCAGAAATTCGAGGGGGAAGGCCGGTGGAAAGAGAGCA
TATCCACCTCTTGCATGTGA back to topprotein sequence of rna8517 >rna8517-protein ID=rna8517-protein|Name=rna8517|organism=Nannochloropsis gaditana|type=polypeptide|length=108bp
MSAPAATDDAKSTPPASAGAATTATTHDGPAGAYEDPELLHKLADTVRRT
MKIRNGVLQETRVDYFKGTKLIKYLTTDSLSKADGKLPSVASEEQAIAIG
NLLLRAKG back to topmRNA from alignment at KK037249.1:144258..145098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8517 ID=rna8517|Name=rna8517|organism=Nannochloropsis gaditana|type=mRNA|length=841bp|location=Sequence derived from alignment at KK037249.1:144258..145098+ (Nannochloropsis gaditana)
GGACACGATTTCCCTTCCTTATGAAAGACTCGACCTGCGGTAACGCGCGC
GAATAGGTTGACAGGCATGTAGaaaaggtggtggaggggtgCGTCGTGCT
TGGTAACGCGTAAAGGCGTGGATTTGACGACCGTAATGCCAGCCTTGGCG
GAATGAGGGTACCTGACCATGATGATTGTCTGTCTGCCGTCCACCTTCTT
GTGCCAAAAATAGGAGCCACCCAGGCCTTTATGCCCCACCCGTAGAAGTA
TTCTGCAGACACTGATGGTAATTCCTTATCACTTGTAAAGTTGCATTGTT
TCGCCCCCACAAAAGTGTTCGCAATGAGTGCTCCAGCGGCCACAGATGAC
GCGAAGTCCACCCCCCCTGCGTCTGCGGGCGCCGCGACAACTGCCACTAC
TCATGACGGGCCAGCGGGAGCGTATGAAGATCCGGAATTACTCCACAAAC
TTGCAGACACGGTGCGGCGGACAATGAAAATCCGAAACGGAGTCCTTCAA
GAGACTCGTGTGGATTACTTCAAAGGTAgtaagaggggggaggggacgag
aaaaGACAAGAAGCAAGGACGTGTGCTGAATCTCCTTGAGGCCATCGAAA
AGTCTGTAAAAGGCATCCAAAATGCAGGAGCAAGAACAATGGCACAGTTG
CGCTGTCCGTGACCTTCCCCTGCCaattccttcctttccaggcACGAAAC
TAATCAAATACCTGACCACGGACTCGCTGAGCAAAGCAGACGGGAAACTT
CCCAGTGTAGCctcggaggagcaggccatCGCCATCGGCAACCTGCTGCT
GCGAGCCAaggggtagggaaggagggagggagggagggagg back to topCoding sequence (CDS) from alignment at KK037249.1:144258..145098+ >rna8517 ID=rna8517|Name=rna8517|organism=Nannochloropsis gaditana|type=CDS|length=654bp|location=Sequence derived from alignment at KK037249.1:144258..145098+ (Nannochloropsis gaditana)
ATGAGTGCTCCAGCGGCCACAGATGACGCGAAGTCCACCCCCCCTGCGTC
TGCGGGCGCCGCGACAACTGCCACTACTCATGACGGGCCAGCGGGAGCGT
ATGAAGATCCGGAATTACTCCACAAACTTGCAGACACGGTGCGGCGGACA
ATGAAAATCCGAAACGGAGTCCTTCAAGAGACTCGTGTGGATTACTTCAA
AGgcACGAAACTAATCAAATACCTGACCACGGACTCGCTGAGCAAAGCAG
ACGGGAAACTTCCCAGTGTAGCctcggaggagcaggccatCGCCATCGGC
AACCTGCTGCTGCGAGCCAaggggtagATGAGTGCTCCAGCGGCCACAGA
TGACGCGAAGTCCACCCCCCCTGCGTCTGCGGGCGCCGCGACAACTGCCA
CTACTCATGACGGGCCAGCGGGAGCGTATGAAGATCCGGAATTACTCCAC
AAACTTGCAGACACGGTGCGGCGGACAATGAAAATCCGAAACGGAGTCCT
TCAAGAGACTCGTGTGGATTACTTCAAAGgcACGAAACTAATCAAATACC
TGACCACGGACTCGCTGAGCAAAGCAGACGGGAAACTTCCCAGTGTAGCc
tcggaggagcaggccatCGCCATCGGCAACCTGCTGCTGCGAGCCAaggg
gtag back to top
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