EWM22185.1, cds8490 (CDS) Nannochloropsis gaditana

Overview
NameEWM22185.1
Unique Namecds8490
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:144581..144782 +
Alignment locationKK037249.1:144949..145073 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22185.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100645g3.7187.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:144581..144782 +
KK037249.1supercontigKK037249.1:144949..145073 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22185.1 vs. NCBI_GenBank
Match: gi|585102617|gb|EWM22185.1| (hypothetical protein Naga_100645g3 [Nannochloropsis gaditana])

HSP 1 Score: 216.468 bits (550), Expect = 2.552e-71
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 
Query:    1 MSAPAATDDAKSTPPASAGAATTATTHDGPAGAYEDPELLHKLADTVRRTMKIRNGVLQETRVDYFKGTKLIKYLTTDSLSKADGKLPSVASEEQAIAIGNLLLRAKG 108
            MSAPAATDDAKSTPPASAGAATTATTHDGPAGAYEDPELLHKLADTVRRTMKIRNGVLQETRVDYFKGTKLIKYLTTDSLSKADGKLPSVASEEQAIAIGNLLLRAKG
Sbjct:    1 MSAPAATDDAKSTPPASAGAATTATTHDGPAGAYEDPELLHKLADTVRRTMKIRNGVLQETRVDYFKGTKLIKYLTTDSLSKADGKLPSVASEEQAIAIGNLLLRAKG 108
The following BLAST results are available for this feature:
BLAST of EWM22185.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102617|gb|EWM22185.1|2.552e-71100.00hypothetical protein Naga_100645g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8517rna8517Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications