rna8514, rna8514 (mRNA) Nannochloropsis gaditana

Overview
Namerna8514
Unique Namerna8514
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length928
Alignment locationKK037249.1:137336..137817 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103393g1.1263.mrna
Orig protein idgnl|cribi|Naga_103393g1.1263
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:137336..137817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103393g1gene8252Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22186.1cds8487Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8514rna8514-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8514 ID=rna8514|Name=rna8514|organism=Nannochloropsis gaditana|type=mRNA|length=928bp
AGTCTTGGCGACGAATCAATCAGTCGGAGCAAATGCGCTGTATTAAAATA
CACTCACAACGTGCGCATGCCGCATCCATTCACACTGCACAGAGACGCCG
AGCAAAGGCTTTGAAGGGCTTCTGGACTTATTCGTGCCCGATGTCCATTT
GTTTCCTCTGTTTCCCGGACGATGTCATCGCGTAAGTACCTGTGTGATGT
TCTCTGGGGTTGTATGCTGCTTCTCGACAAGTCCGCGCGACGTAACCATC
ATACAGCCTAATGTCCTTTCCTGAAGCTTTCTTTGTAGTACCACTCCCTG
TATATGTAATTGATATTGTATCGACTTACAGCGGGTATCCGAGATCGGAC
AATCCCTACACCTTCAAGGTTCCAATGAGCAAAACGTGCATCGCGGATCC
ATGCTGCTGCCTTGCATCTCTCGTTTGTCCTCTCCCTGTGGCCTGTGTCA
ACCGGCACCGGGCATTGGAGGGGAACATGGACGAATATAAGTGCTGTCAG
GGGTACTACCCCCTGTGCGGGTTTCGCGCCGGGGAGGTGGGCGAGAGTAC
TTGTCCCTCTATGTGTCTGTGCCTGGAGGCCACCTGTTGCTTTACCTGCG
CCGTCTCCGCCACCCGGAACTACTTGATGGACAAGTACCGCATTCACCCC
GACCCTATGGACTACCAGATTATCAGGTGCAGCAACGCGATGCAGTGTCT
GGCGTGCATCTGCTCGCTGGCCTCGATTTGCGTCAAGGACCTTCGGGAAG
GCGCGCGGATCCTCCGGCACGTGGCCCATATCACGTTCTGCACCGTCCAA
GGCTGTATGCAGACGCAAAGCGCCGTGGAGATTGCTTTTCAGGAGAAAAA
AGGAGTGCAAGCACCCACAGTTAACGCCATCCAAGACCGAAGCTGAATGA
GAGAGGGAAAGCGGGATAGAGAGACGGA
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protein sequence of rna8514

>rna8514-protein ID=rna8514-protein|Name=rna8514|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
MRLRRMMRLEGRRGRHGSMRGARQFDTRGIKHIKQTCPVRALAGDSRGVS
RPSSFPHGLGLARPRIRAIFTKYSNDMFPYGLPEGLPASLCTPFSLPPSL
SSLPPSLLPPMGMNSSSLSHTPGDTRV
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mRNA from alignment at KK037249.1:137336..137817-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8514 ID=rna8514|Name=rna8514|organism=Nannochloropsis gaditana|type=mRNA|length=482bp|location=Sequence derived from alignment at KK037249.1:137336..137817- (Nannochloropsis gaditana)
GGAGGGGAGAAATCTGAGCGAGGAAGGGGAAAGATGCTACTGTAAGGGCT
AGTGAAGGCACTAGGCCGGAAGCGCCCAAGACGAAGGAGGTTGGGCACGA
TGCGACTGAGGAGAATGATGAGACTGGAAGGGCGACGGGGCAGGCATGGA
TCCATGCGCGGAGCGAGGCAATTCGACACGAGAGGTATCAAGCACATAAA
GCAGACCTGCCCTGTCCGGGCATTGGCTGGAGACTCACGTGGTGTTTCTC
GTCCCTCTTCCTTTCCCCACGGGCTGGGATTGGCAAGGCCGAGAATTCGC
GCCATATTTACGAAATATTCGAACGACATGTTCCCCTACGGGTTGCCCGA
GGGTCTCCCTGCTTCACTTTGCACACCCTTCTCCCTCCCTCCCTCCCTCA
GCTCCCTCCCTCCCTCCCTCCTCCCCCCCATGGGAATGAACTCAAGTTCC
CTTTCTCACACGCCTGGAGACACTCGCGTGCA
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Coding sequence (CDS) from alignment at KK037249.1:137336..137817-

>rna8514 ID=rna8514|Name=rna8514|organism=Nannochloropsis gaditana|type=CDS|length=383bp|location=Sequence derived from alignment at KK037249.1:137336..137817- (Nannochloropsis gaditana)
ATGCGACTGAGGAGAATGATGAGACTGGAAGGGCGACGGGGCAGGCATGG
ATCCATGCGCGGAGCGAGGCAATTCGACACGAGAGGTATCAAGCACATAA
AGCAGACCTGCCCTGTCCGGGCATTGGCTGGAGACTCACGTGGTGTTTCT
CGTCCCTCTTCCTTTCCCCACGGGCTGGGATTGGCAAGGCCGAGAATTCG
CGCCATATTTACGAAATATTCGAACGACATGTTCCCCTACGGGTTGCCCG
AGGGTCTCCCTGCTTCACTTTGCACACCCTTCTCCCTCCCTCCCTCCCTC
AGCTCCCTCCCTCCCTCCCTCCTCCCCCCCATGGGAATGAACTCAAGTTC
CCTTTCTCACACGCCTGGAGACACTCGCGTGCA
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Synonyms
Publications