EWM22186.1, cds8487 (CDS) Nannochloropsis gaditana

Overview
NameEWM22186.1
Unique Namecds8487
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:137336..137718 -

Link to JBrowse

Properties
Property NameValue
Start range137336
Start range.
Protein idEWM22186.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_103393g1.1263.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:137336..137718 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22186.1 vs. NCBI_GenBank
Match: gi|585102619|gb|EWM22186.1| (hypothetical protein Naga_103393g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 251.521 bits (641), Expect = 1.880e-84
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 
Query:    1 MRLRRMMRLEGRRGRHGSMRGARQFDTRGIKHIKQTCPVRALAGDSRGVSRPSSFPHGLGLARPRIRAIFTKYSNDMFPYGLPEGLPASLCTPFSLPPSLSSLPPSLLPPMGMNSSSLSHTPGDTRV 127
            MRLRRMMRLEGRRGRHGSMRGARQFDTRGIKHIKQTCPVRALAGDSRGVSRPSSFPHGLGLARPRIRAIFTKYSNDMFPYGLPEGLPASLCTPFSLPPSLSSLPPSLLPPMGMNSSSLSHTPGDTRV
Sbjct:    1 MRLRRMMRLEGRRGRHGSMRGARQFDTRGIKHIKQTCPVRALAGDSRGVSRPSSFPHGLGLARPRIRAIFTKYSNDMFPYGLPEGLPASLCTPFSLPPSLSSLPPSLLPPMGMNSSSLSHTPGDTRV 127
The following BLAST results are available for this feature:
BLAST of EWM22186.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102619|gb|EWM22186.1|1.880e-84100.00hypothetical protein Naga_103393g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8514rna8514Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications