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Properties
| Property Name | Value |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
| Orig transcript id | gnl|cribi|Naga_101421g1.7092.mrna |
| Orig protein id | gnl|cribi|Naga_101421g1.7092 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:121328..122413 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8505 ID=rna8505|Name=rna8505|organism=Nannochloropsis gaditana|type=mRNA|length=884bp
AACGGTAAATGTTACCTTGAAAGGATTATCTTTCCTGTCGAAAGCTTCCC
GCATCTCGAAGTCAAACGTGCCCATACAGGCCAGGCGCTCCAGCCGGTAA
AAGAGGGCGGCACCCTCGCGGGTATTGCCGCATTTGGAGTGGTGGAAGCC
TGGGCGTGGCGGAGAAACACCAGGGCTCGTGAAAATGAGAGAGGGTCCTC
CAGGAAAGTCGGGGGGTTCAGCCACGGGGAGGACGGGTGGACGGCATTCA
TTTGAAGCTTCCTGGCATGCCCTGGTTGCTTTAACGACGATCGCACCATG
CCTTAATACCCGAGACTTGCGAGCACGTTACAGTCATTCCTCAAAAACGG
GCAGAGGCCTGGCTTGCGAACAGGAGGTGCGTGCACGCGGAGGCAGCACA
GAGGTACTTTCTTGCCTCCCTGCCTCCCTCCCTCCCTTCCTCCCTCCTTC
CCTCGACGTGTCCGTCGTCTTACCTGCTAGACCTGAAGATAAGAGGACAG
GGGAGAGGAGCTCGCGAAATACACGTTCGTCGACCTGGGAAGGAGGGAAG
GAGGGAGGGAGTGAGGGAGGGTATCGAATCTTGGAGAGTAGAGGGACGTG
GGGATGACAATGGCGGTTGCATCCTGAGTGGAAGGCAAAAGGAAGCATGA
GACGGATTCCATCCCAGAATAAAAAAGGGAAAGAAAAGGAAAAGGAAGGA
GGGGAGGAAAGAGGGGAGGAAGGGGGGAGGGAAGGCTTACCTCTTGGAGG
CAGACCAGGTCCGGAGAGTAGGAGAGCAGCTCTTTGAGGGTAAGGAGGCT
CCGGTACTCGGATTGCAAGTGGCTGGGATCCACGTAGGGATACAGGTGGG
TCTGAGCCCAGGCGGAGGTTGCGTAACTGGGTGG back to topprotein sequence of rna8505 >rna8505-protein ID=rna8505-protein|Name=rna8505|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEK
KYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFE
KSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG back to topmRNA from alignment at KK037249.1:121328..122413+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8505 ID=rna8505|Name=rna8505|organism=Nannochloropsis gaditana|type=mRNA|length=1086bp|location=Sequence derived from alignment at KK037249.1:121328..122413+ (Nannochloropsis gaditana)
ATGGCAGCAACTGCGCCAGTCGCTGCACCTACCAGTGCGTTGATAACCCA
GGCGCAACAGAAGACAGTGGCATATTTGCCGAGGATCGACTCCCAAAGAG
CTCACACAGTGAGTGCTACGGACTTGGAGGGGGCTTTCCAGTACGAAAAA
AAATACGTTGGTACGGCTTAAAGGGAGGACTCAGGGACTGTTGGTCTCGT
CAAAAACCCAAAATTGCACATTTGAGTCGTCGGAGGTGTATAGATTTTGA
AAAAGGAGTATGGAAAGATCCACAAATTCTAGCAAGGGAGGATGTaattc
ctcgtcttctcctcaaaccacccttcccccctcttcgatAAACCTCCGTC
TCTGACGTCCTCAGGCAAAGTAAGAGATGTCTATACCACGGCagactccc
tccttctcatttcCACGGACCGCCAAAGCGCATTCGACCGCAACCTTGCC
TCAATCCCGTTCAAAGGACAAGTGTTGAACTTAACCTCCCAATGGTACGG
CCCCAGAcaagcgaagagggaggtcaTCGACACCTTGCCTTTCACTttcc
tgcgtcctcccctcagCCGTGTTCTCTCGCCATTTCCCAATCCCAACTCC
TTGTTCACTGCTGTTCGCTCCTCACAGAcacttctcccctccctcttccc
ctcccttcctcaggtGGTTCGAGAAGAGTAAAGATCTGGTGCCCAACCAC
ATCCTTGCGGTTCCTCACCCAAACGCCTGCATCGGGAAGAAATGCACGAT
GTTTCCCGTCGAATTCGTCATGCGCGGGTGAGGGTGTCGCgccatctctt
tctttcccctgttgctccttccctccctccctttcctcgccctttcccct
cctctcatcTTTTTCTTACCCAAGGCGACGTGTCGTTCGCTCGTATGCTT
CTGATTACCAATCCTCTCATTTCCCTTGGCGATTGCACGCAAAACCCGCT
CATCTtgtccctttctccctccccctccccttctccctccccagctaCAT
TACGGGGTCGACCGACACCTCCCTCTGGACCAATTATAAGAAGGGCGTGC
GACAGTATTGCGGTCATGCCCTGCCCGAGGGGTTGA back to topCoding sequence (CDS) from alignment at KK037249.1:121328..122413+ >rna8505 ID=rna8505|Name=rna8505|organism=Nannochloropsis gaditana|type=CDS|length=2235bp|location=Sequence derived from alignment at KK037249.1:121328..122413+ (Nannochloropsis gaditana)
ATGGCAGCAACTGCGCCAGTCGCTGCACCTACCAGTGCGTTGATAACCCA
GGCGCAACAGAAGACAGTGGCATATTTGCCGAGGATCGACTCCCAAAGAG
CTCACACAGTGAGTGCTACGGACTTGGAGGGGGCTTTCCAGTACGAAAAA
AAATACGTTGGCAAAGTAAGAGATGTCTATACCACGGCagactccctcct
tctcatttcCACGGACCGCCAAAGCGCATTCGACCGCAACCTTGCCTCAA
TCCCGTTCAAAGGACAAGTGTTGAACTTAACCTCCCAATGgtGGTTCGAG
AAGAGTAAAGATCTGGTGCCCAACCACATCCTTGCGGTTCCTCACCCAAA
CGCCTGCATCGGGAAGAAATGCACGATGTTTCCCGTCGAATTCGTCATGC
GCGGctaCATTACGGGTATTGCGGTCATGCCCTGCCCGAGGGGTTGAATG
GCAGCAACTGCGCCAGTCGCTGCACCTACCAGTGCGTTGATAACCCAGGC
GCAACAGAAGACAGTGGCATATTTGCCGAGGATCGACTCCCAAAGAGCTC
ACACAGTGAGTGCTACGGACTTGGAGGGGGCTTTCCAGTACGAAAAAAAA
TACGTTGGCAAAGTAAGAGATGTCTATACCACGGCagactccctccttct
catttcCACGGACCGCCAAAGCGCATTCGACCGCAACCTTGCCTCAATCC
CGTTCAAAGGACAAGTGTTGAACTTAACCTCCCAATGgtGGTTCGAGAAG
AGTAAAGATCTGGTGCCCAACCACATCCTTGCGGTTCCTCACCCAAACGC
CTGCATCGGGAAGAAATGCACGATGTTTCCCGTCGAATTCGTCATGCGCG
GctaCATTACGGGTATTGCGGTCATGCCCTGCCCGAGGGGTTGAATGGCA
GCAACTGCGCCAGTCGCTGCACCTACCAGTGCGTTGATAACCCAGGCGCA
ACAGAAGACAGTGGCATATTTGCCGAGGATCGACTCCCAAAGAGCTCACA
CAGTGAGTGCTACGGACTTGGAGGGGGCTTTCCAGTACGAAAAAAAATAC
GTTGGCAAAGTAAGAGATGTCTATACCACGGCagactccctccttctcat
ttcCACGGACCGCCAAAGCGCATTCGACCGCAACCTTGCCTCAATCCCGT
TCAAAGGACAAGTGTTGAACTTAACCTCCCAATGgtGGTTCGAGAAGAGT
AAAGATCTGGTGCCCAACCACATCCTTGCGGTTCCTCACCCAAACGCCTG
CATCGGGAAGAAATGCACGATGTTTCCCGTCGAATTCGTCATGCGCGGct
aCATTACGGGTATTGCGGTCATGCCCTGCCCGAGGGGTTGAATGGCAGCA
ACTGCGCCAGTCGCTGCACCTACCAGTGCGTTGATAACCCAGGCGCAACA
GAAGACAGTGGCATATTTGCCGAGGATCGACTCCCAAAGAGCTCACACAG
TGAGTGCTACGGACTTGGAGGGGGCTTTCCAGTACGAAAAAAAATACGTT
GGCAAAGTAAGAGATGTCTATACCACGGCagactccctccttctcatttc
CACGGACCGCCAAAGCGCATTCGACCGCAACCTTGCCTCAATCCCGTTCA
AAGGACAAGTGTTGAACTTAACCTCCCAATGgtGGTTCGAGAAGAGTAAA
GATCTGGTGCCCAACCACATCCTTGCGGTTCCTCACCCAAACGCCTGCAT
CGGGAAGAAATGCACGATGTTTCCCGTCGAATTCGTCATGCGCGGctaCA
TTACGGGTATTGCGGTCATGCCCTGCCCGAGGGGTTGAATGGCAGCAACT
GCGCCAGTCGCTGCACCTACCAGTGCGTTGATAACCCAGGCGCAACAGAA
GACAGTGGCATATTTGCCGAGGATCGACTCCCAAAGAGCTCACACAGTGA
GTGCTACGGACTTGGAGGGGGCTTTCCAGTACGAAAAAAAATACGTTGGC
AAAGTAAGAGATGTCTATACCACGGCagactccctccttctcatttcCAC
GGACCGCCAAAGCGCATTCGACCGCAACCTTGCCTCAATCCCGTTCAAAG
GACAAGTGTTGAACTTAACCTCCCAATGgtGGTTCGAGAAGAGTAAAGAT
CTGGTGCCCAACCACATCCTTGCGGTTCCTCACCCAAACGCCTGCATCGG
GAAGAAATGCACGATGTTTCCCGTCGAATTCGTCATGCGCGGctaCATTA
CGGGTATTGCGGTCATGCCCTGCCCGAGGGGTTGA back to top
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