EWM22195.1, cds8478 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|585102633|gb|EWM22195.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase [Nannochloropsis gaditana]) HSP 1 Score: 311.227 bits (796), Expect = 1.752e-107 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 Query: 1 MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG 148 MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG Sbjct: 1 MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG 148
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|301108175|ref|XP_002903169.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase, putative [Phytophthora infestans T30-4] >gi|262097541|gb|EEY55593.1| phosphoribosylaminoimidazole-succinocarboxamide synthase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 155.221 bits (391), Expect = 7.678e-46 Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0 Query: 12 SALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYE----KKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 S ++ +A+++T YLP+I++ R T++AT L A E K+ GKVRDVY D +LL+STDRQSAFDR LAS+PFK +VL LTS WWF ++K +V NH+L VPHP+A + KKCT+FPVEFV+RGYITG Sbjct: 2 SVIVAEAEKRTQTYLPKIENGR--TLTATSL-AALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITG 130
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1032150539|gb|OAO14286.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase / phosphoribosylaminoimidazole carboxylase fusion protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 159.844 bits (403), Expect = 1.880e-45 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 0 Query: 12 SALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 S + + +T +Y ID+ RA+T+S T+LEG YVGKVRD + + D ++LI+TDR S FDR L ++PFKGQVLNLTS WWF+ ++ ++PNH+LAVP PN IG+KCT FP+EFVMRGYITG Sbjct: 150 SLYVADSDIRTKSYFSTIDAARANTLSKTNLEG-INTTNLYVGKVRDRFESGDKVVLITTDRMSGFDRELCTVPFKGQVLNLTSAWWFKHTEHIIPNHVLAVPDPNVTIGRKCTPFPIEFVMRGYITG 276
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1032147362|gb|OAO11721.1| (phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 157.532 bits (397), Expect = 6.575e-44 Identity = 69/116 (59.48%), Postives = 90/116 (77.59%), Query Frame = 0 Query: 24 AYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 +Y+ ID+ RA+T+S T+LEG YVGKVRD + + D ++LI+TDR S FDR L ++PFKGQVLNLTS WWF+ ++ ++PNH+LAVP PN IG+KCT FP+EFVMRGYITG Sbjct: 162 SYISTIDAARANTLSKTNLEG-INTTNLYVGKVRDRFESGDKVVLITTDRMSGFDRELCTVPFKGQVLNLTSAWWFKHTEHIIPNHVLAVPDPNVTIGRKCTPFPIEFVMRGYITG 276
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|298715710|emb|CBJ28207.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 155.992 bits (393), Expect = 1.658e-43 Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 0 Query: 14 LITQAQQKTVAYLPRI-----DSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 ++ AQ+KT YL RI DS R + + + K+ VGKVRD Y D+++L++TDRQSAFDR LA +PFKG VLN TS WWFEK++ + PNH+L PHPN C+GKKC +FP+EFVMRGY+TG Sbjct: 20 VVADAQEKTKKYLGRIEAAVDDSARQCIAESRLDQQLVGHSKRTVGKVRDTYICDDAIVLVTTDRQSAFDRQLARVPFKGAVLNQTSAWWFEKTRHIAPNHLLGSPHPNVCVGKKCKVFPIEFVMRGYLTG 150
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1083708924|gb|OGH94645.1| (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_41_14]) HSP 1 Score: 154.066 bits (388), Expect = 3.051e-43 Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 0 Query: 50 KKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 KK VGKVRD Y +D ++LI+TDRQSAFDR LASIPFKGQVLNLTS WWFE++K +VPNH+++VPHPN IGKKC +FPVEFV+RGYITG Sbjct: 24 KKKVGKVRDSYELSDKIILITTDRQSAFDRVLASIPFKGQVLNLTSAWWFEQTKQIVPNHVISVPHPNVTIGKKCQVFPVEFVVRGYITG 113
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|855305157|ref|XP_012895326.1| (uncharacterized protein [Blastocystis hominis] >gi|300175735|emb|CBK21278.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 156.377 bits (394), Expect = 8.397e-43 Identity = 68/126 (53.97%), Postives = 93/126 (73.81%), Query Frame = 0 Query: 14 LITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 + + +T +YL +ID R +T+S T+LEG + Y+GKVRD + D ++LI+TDR S FDR L ++PFKGQVLNLTS WWF++++ +VPNH+LA+P N IG+KCT FP+EFVMRGYITG Sbjct: 143 FVADSDIRTKSYLSKIDQARCNTLSKTNLEG-INVQNLYIGKVRDRFECNDKVVLITTDRMSGFDRQLCTVPFKGQVLNLTSAWWFKQTEHIVPNHVLAIPDANVTIGRKCTPFPIEFVMRGYITG 267
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1214694803|gb|OWZ08753.1| (Phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora megakarya]) HSP 1 Score: 153.295 bits (386), Expect = 1.072e-42 Identity = 72/129 (55.81%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 12 SALITQAQQKTVAYLPRIDSQRAHTV-SATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 S ++ +A+++T +YLP+I++ +A TV S L ++ GKVRDVY D +LL+STDRQSAFDR LAS+PFK +VL LTS WWF ++K++V NH+L VPHP+A + KKCT+FPVEFV+RGYITG Sbjct: 2 SVIVAEAEKRTKSYLPKIENGQALTVTSLAALSKELPAFRQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKNIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITG 130
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|301108181|ref|XP_002903172.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora infestans T30-4] >gi|262097544|gb|EEY55596.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora infestans T30-4]) HSP 1 Score: 153.295 bits (386), Expect = 1.210e-42 Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0 Query: 12 SALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYE----KKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 S ++ +A+++T YLP+I++ R T++AT L A E K+ GKVRDVY D +LL+STDRQSAFDR LAS+PFK +VL LTS WWF ++K +V NH+L VPHP+A + KKCT+FPVEFV+RGYITG Sbjct: 2 SVIVAEAEKRTQTYLPKIENGR--TLTATSL-AALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITG 130
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|406914569|gb|EKD53736.1| (hypothetical protein ACD_60C00159G0016 [uncultured bacterium]) HSP 1 Score: 152.14 bits (383), Expect = 2.362e-42 Identity = 66/97 (68.04%), Postives = 81/97 (83.51%), Query Frame = 0 Query: 43 EGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139 E F + KKY GKVRD Y T D+L+LI+TDRQSAFDR LAS+PFKGQVLN TS WWF+K++D++PNH+L+VP PN I KKC +FPVEFV+RG+ITG Sbjct: 23 ETHFTFGKKYQGKVRDTYDTGDTLILITTDRQSAFDRVLASVPFKGQVLNQTSAWWFKKTEDILPNHVLSVPDPNVTIAKKCKVFPVEFVVRGFITG 119 The following BLAST results are available for this feature:
BLAST of EWM22195.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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