EWM22195.1, cds8478 (CDS) Nannochloropsis gaditana

Overview
NameEWM22195.1
Unique Namecds8478
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:121328..121487 +
Alignment locationKK037249.1:121692..121821 +
Alignment locationKK037249.1:121991..122104 +
Alignment locationKK037249.1:122322..122333 +
Alignment locationKK037249.1:122383..122413 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22195.1
Productphosphoribosylaminoimidazole-succinocarboxamide synthase
Orig transcript idgnl|cribi|Naga_101421g1.7092.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:121328..121487 +
KK037249.1supercontigKK037249.1:121692..121821 +
KK037249.1supercontigKK037249.1:121991..122104 +
KK037249.1supercontigKK037249.1:122322..122333 +
KK037249.1supercontigKK037249.1:122383..122413 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR028923SAICAR_synt/ADE2_N
Homology
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|585102633|gb|EWM22195.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase [Nannochloropsis gaditana])

HSP 1 Score: 311.227 bits (796), Expect = 1.752e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
Query:    1 MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG 148
            MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG
Sbjct:    1 MAATAPVAAPTSALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITGIAVMPCPRG 148          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|301108175|ref|XP_002903169.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase, putative [Phytophthora infestans T30-4] >gi|262097541|gb|EEY55593.1| phosphoribosylaminoimidazole-succinocarboxamide synthase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 155.221 bits (391), Expect = 7.678e-46
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0
Query:   12 SALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYE----KKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            S ++ +A+++T  YLP+I++ R  T++AT L  A   E    K+  GKVRDVY   D +LL+STDRQSAFDR LAS+PFK +VL LTS WWF ++K +V NH+L VPHP+A + KKCT+FPVEFV+RGYITG
Sbjct:    2 SVIVAEAEKRTQTYLPKIENGR--TLTATSL-AALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITG 130          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1032150539|gb|OAO14286.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase / phosphoribosylaminoimidazole carboxylase fusion protein [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 159.844 bits (403), Expect = 1.880e-45
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 0
Query:   12 SALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            S  +  +  +T +Y   ID+ RA+T+S T+LEG       YVGKVRD + + D ++LI+TDR S FDR L ++PFKGQVLNLTS WWF+ ++ ++PNH+LAVP PN  IG+KCT FP+EFVMRGYITG
Sbjct:  150 SLYVADSDIRTKSYFSTIDAARANTLSKTNLEG-INTTNLYVGKVRDRFESGDKVVLITTDRMSGFDRELCTVPFKGQVLNLTSAWWFKHTEHIIPNHVLAVPDPNVTIGRKCTPFPIEFVMRGYITG 276          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1032147362|gb|OAO11721.1| (phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 157.532 bits (397), Expect = 6.575e-44
Identity = 69/116 (59.48%), Postives = 90/116 (77.59%), Query Frame = 0
Query:   24 AYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            +Y+  ID+ RA+T+S T+LEG       YVGKVRD + + D ++LI+TDR S FDR L ++PFKGQVLNLTS WWF+ ++ ++PNH+LAVP PN  IG+KCT FP+EFVMRGYITG
Sbjct:  162 SYISTIDAARANTLSKTNLEG-INTTNLYVGKVRDRFESGDKVVLITTDRMSGFDRELCTVPFKGQVLNLTSAWWFKHTEHIIPNHVLAVPDPNVTIGRKCTPFPIEFVMRGYITG 276          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|298715710|emb|CBJ28207.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 155.992 bits (393), Expect = 1.658e-43
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 0
Query:   14 LITQAQQKTVAYLPRI-----DSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            ++  AQ+KT  YL RI     DS R     +   +    + K+ VGKVRD Y   D+++L++TDRQSAFDR LA +PFKG VLN TS WWFEK++ + PNH+L  PHPN C+GKKC +FP+EFVMRGY+TG
Sbjct:   20 VVADAQEKTKKYLGRIEAAVDDSARQCIAESRLDQQLVGHSKRTVGKVRDTYICDDAIVLVTTDRQSAFDRQLARVPFKGAVLNQTSAWWFEKTRHIAPNHLLGSPHPNVCVGKKCKVFPIEFVMRGYLTG 150          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1083708924|gb|OGH94645.1| (phosphoribosylaminoimidazolesuccinocarboxamide synthase [Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_41_14])

HSP 1 Score: 154.066 bits (388), Expect = 3.051e-43
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 0
Query:   50 KKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            KK VGKVRD Y  +D ++LI+TDRQSAFDR LASIPFKGQVLNLTS WWFE++K +VPNH+++VPHPN  IGKKC +FPVEFV+RGYITG
Sbjct:   24 KKKVGKVRDSYELSDKIILITTDRQSAFDRVLASIPFKGQVLNLTSAWWFEQTKQIVPNHVISVPHPNVTIGKKCQVFPVEFVVRGYITG 113          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|855305157|ref|XP_012895326.1| (uncharacterized protein [Blastocystis hominis] >gi|300175735|emb|CBK21278.2| unnamed protein product [Blastocystis hominis])

HSP 1 Score: 156.377 bits (394), Expect = 8.397e-43
Identity = 68/126 (53.97%), Postives = 93/126 (73.81%), Query Frame = 0
Query:   14 LITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
             +  +  +T +YL +ID  R +T+S T+LEG    +  Y+GKVRD +   D ++LI+TDR S FDR L ++PFKGQVLNLTS WWF++++ +VPNH+LA+P  N  IG+KCT FP+EFVMRGYITG
Sbjct:  143 FVADSDIRTKSYLSKIDQARCNTLSKTNLEG-INVQNLYIGKVRDRFECNDKVVLITTDRMSGFDRQLCTVPFKGQVLNLTSAWWFKQTEHIVPNHVLAIPDANVTIGRKCTPFPIEFVMRGYITG 267          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|1214694803|gb|OWZ08753.1| (Phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora megakarya])

HSP 1 Score: 153.295 bits (386), Expect = 1.072e-42
Identity = 72/129 (55.81%), Postives = 98/129 (75.97%), Query Frame = 0
Query:   12 SALITQAQQKTVAYLPRIDSQRAHTV-SATDLEGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            S ++ +A+++T +YLP+I++ +A TV S   L       ++  GKVRDVY   D +LL+STDRQSAFDR LAS+PFK +VL LTS WWF ++K++V NH+L VPHP+A + KKCT+FPVEFV+RGYITG
Sbjct:    2 SVIVAEAEKRTKSYLPKIENGQALTVTSLAALSKELPAFRQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKNIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITG 130          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|301108181|ref|XP_002903172.1| (phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora infestans T30-4] >gi|262097544|gb|EEY55596.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Phytophthora infestans T30-4])

HSP 1 Score: 153.295 bits (386), Expect = 1.210e-42
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0
Query:   12 SALITQAQQKTVAYLPRIDSQRAHTVSATDLEGAFQYE----KKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            S ++ +A+++T  YLP+I++ R  T++AT L  A   E    K+  GKVRDVY   D +LL+STDRQSAFDR LAS+PFK +VL LTS WWF ++K +V NH+L VPHP+A + KKCT+FPVEFV+RGYITG
Sbjct:    2 SVIVAEAEKRTQTYLPKIENGR--TLTATSL-AALSKELPAFKQITGKVRDVYVFEDRVLLVSTDRQSAFDRALASVPFKSRVLTLTSVWWFNQTKHIVANHLLGVPHPSAMLCKKCTVFPVEFVVRGYITG 130          
BLAST of EWM22195.1 vs. NCBI_GenBank
Match: gi|406914569|gb|EKD53736.1| (hypothetical protein ACD_60C00159G0016 [uncultured bacterium])

HSP 1 Score: 152.14 bits (383), Expect = 2.362e-42
Identity = 66/97 (68.04%), Postives = 81/97 (83.51%), Query Frame = 0
Query:   43 EGAFQYEKKYVGKVRDVYTTADSLLLISTDRQSAFDRNLASIPFKGQVLNLTSQWWFEKSKDLVPNHILAVPHPNACIGKKCTMFPVEFVMRGYITG 139
            E  F + KKY GKVRD Y T D+L+LI+TDRQSAFDR LAS+PFKGQVLN TS WWF+K++D++PNH+L+VP PN  I KKC +FPVEFV+RG+ITG
Sbjct:   23 ETHFTFGKKYQGKVRDTYDTGDTLILITTDRQSAFDRVLASVPFKGQVLNQTSAWWFKKTEDILPNHVLSVPDPNVTIAKKCKVFPVEFVVRGFITG 119          
The following BLAST results are available for this feature:
BLAST of EWM22195.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102633|gb|EWM22195.1|1.752e-107100.00phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
gi|301108175|ref|XP_002903169.1|7.678e-4656.82phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
gi|1032150539|gb|OAO14286.1|1.880e-4555.47phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
gi|1032147362|gb|OAO11721.1|6.575e-4459.48phosphoribosylaminoimidazole carboxylase / phospho... [more]
gi|298715710|emb|CBJ28207.1|1.658e-4353.44conserved unknown protein [Ectocarpus siliculosus][more]
gi|1083708924|gb|OGH94645.1|3.051e-4374.44phosphoribosylaminoimidazolesuccinocarboxamide syn... [more]
gi|855305157|ref|XP_012895326.1|8.397e-4353.97uncharacterized protein [Blastocystis hominis] >gi... [more]
gi|1214694803|gb|OWZ08753.1|1.072e-4255.81Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
gi|301108181|ref|XP_002903172.1|1.210e-4256.82phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
gi|406914569|gb|EKD53736.1|2.362e-4268.04hypothetical protein ACD_60C00159G0016 [uncultured... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8505rna8505Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications