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Properties
| Property Name | Value |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
| Orig transcript id | gnl|cribi|Naga_100621g2.6229.mrna |
| Orig protein id | gnl|cribi|Naga_100621g2.6229 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:116279..118368 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8502 ID=rna8502|Name=rna8502|organism=Nannochloropsis gaditana|type=mRNA|length=2435bp
ATTAGAAAACACGTCTCCTCATATAACACATCTCATGTATCCAGACACGC
ATTTCGAACGTTGATCTTTCAGCAGGAAATGCATCTGTTCCTTCCTGCTA
ACTCAGGGAAATAGATTCCAGGATACTTCTGGGCAACATCCTCGCAAGAT
AACCTCGCCGGGATAATATGCTGCCATTTTCCCCACCTTCACATCCTGCG
AAACGAAAGCACTTCGCCACATCCCCGCTCGTCGTTTTTTATATTATACG
GCATGGTGAAAGCACCGGAAACCGGCAAGGTATTCTCCAGGGCCAACGAG
ATTATCCTTTGACAGACACGGGAAGGCAGCAAGCGCAGGAGACGGGCCGA
CGGCTTCGGCAAGATGCATCTTTACAAGACCTGGAAACAGGGGATGTCTC
TTGCTTCTTTGACCGCATATATTCTAGTGATTTAACAAGAGCGAAAAATA
CCGCCGAGATAATCGTCGAGGAACTGACAGGTGGAAAGCGCCAACCAAGC
AAGGATCCTAGTCATCACGGGAGCAACGACACCAGCAGCAATACCTGTCA
TAACGACGACAATGCGAATGACATTGGACTTGAAAGCCTGCTGACCCTTG
ACACCGATCTTAGGGAAATCTCAGGAGGCGCGCGGGAGGGCCAGCCGCTT
GGTCTTTCACTGCAGGAGGCAATGCGTCGGACGGCTTTGAAGCAGGTGCC
TGAGTGCGGTTTCTACTTTCCTCCCTTACCCTTGTGTCTTTAATTCTCTG
CCCCTTAGTTTCCGTTCAAGATCGATAGTTTTATGTAGGTGTGCCTGTTC
GTTATTGCTAGATTTCCTTTCTCTGTCGTTTGTCGATTTTCAGCCTTTAC
CTGCCTATCCCTCCCTTCCCCCCTGCGCTTACTCACTGCCTATTCCTATT
ATAAACATGCATTTTGCTACACCCTTGTTACCTTTCTAGGGCATTCCCCT
CGAACAGCTGCAACATATGCCATCGGAGACCCTTCACTCGCTTCATTGCC
GTGCCCGCTCCTTCGTCCGACGTGTCCTGACTGCAGCAGCAGAAATGCAA
GCCGGGGGCGAGAGAGAAGAGAAATGCACGGCCGATCTTGCCAAGGTAGA
AAATAGAGGAAGAGAGGGGGCTCCGGAAGCGGAAGGACAAAGAGGGCCCG
CGCGCGTCCTGCTCGTCTCCCACGGCGGCTTGCTCCTCCAGATGTTTCAG
AAGGTAATTGACGTGCTCGTCCCTGTTTCATGCTCACTCTTCAACGTATT
TGGCACGATTCTCTTTTGTTTCTTAAAGGCGTTTTTGAATATGTAATATG
CGATGCAATTCATGAATACCATTACATTTTTTGGGGTTTACGGTGCTTGC
TCCTTCGAGGAGACACCCATCCCTCTCTTTTGTATTTTTTGTCAACCCTC
TGCCCTCAAAATCCTCAATTATCGGCCGCTATGCTACACGCTCTTGTCAC
GGCCTTTCTTCGCGCCATTTGTCAGGTTTTCAAGTTTTACACAGTGCAAA
AAGTCTTAAATGCCTCCATAAGCGTGGTTGAGGCCTACCCTCTTGCGGGG
TCCAATAATTTGGCGAACAACGAGAGATATGAAGGGAAAGGAGGAGCTAA
AGAGGGGGAAGAACAAGACTCACAAGCGGACACCTGCCAATTAGCCTCTG
ACACTCTCTCCTCTCTGGGTACGGAGGATGGGAAGAAAGGGCAAGGAAAT
GAGGGAGGAAAGGTTGAAGGGCTGGAGGAGGAATTTATTTTTCAAGCGCG
GTCCCTGAATGACGTGGCGCATTTGCAGGCTTCTGGCTTGGTGACATCGA
GGAGCACGGCTTTGTAGGGGCTATGGGGTTGGAAACATATTTTGGGGAGG
GAAAGAAGGGCGGCTGGATTTCAAAAAGAGATCTTTTTTGGAAATATCAG
TCAGTCTAGATAGCTTTAAATAGCCAGGCATGGGCGCATTGATAACAAGG
CTGTGGTCTGAAAGTGGACCAGACTGGTGTATATGCTGCAGTCGTGTCTG
TGCGGGTGTGCACTGACATGCTTTGTAGAAATGACTGGGAATTTTGTAGA
GTATATCGGAGAGGAGGACCAAACATGCGAAATAAAGAAACAGAAACGGG
CCAGGCTTAGTTTTTGGAACATGAAAAATAGGGAGGATTGGGAGTCCAGA
GGGTAAAGGGTGGGGTATGACATGGGTGTATGATCAATGCGGGATGGGGA
ACATGGGGATGTTTCAAGGGAAGCGATCGACAAAGCAACAACCTGCGTGG
ATATTGGCAATTCTCGGCAGGATGAAGGACAGTGGAGAATTGAATGGGTC
AATGCACCGATCTCACCGTCCTCATTGCGAACGGTCAAGACTTGTGACTG
ACGAATAGAAAAAGGTTAAAACGATGATCGAATGCACTTGCTACAGGGAA
CAATACCCTCGAGTATTCCTATCGAAAGCCAAAAT back to topprotein sequence of rna8502 >rna8502-protein ID=rna8502-protein|Name=rna8502|organism=Nannochloropsis gaditana|type=polypeptide|length=278bp
MSVLTARQEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTAR
QGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVF
GWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRES
RGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFF
SACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTR
EEAGQDTALPSWQTPSDHVSILCDVRVE back to topmRNA from alignment at KK037249.1:116279..118368- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8502 ID=rna8502|Name=rna8502|organism=Nannochloropsis gaditana|type=mRNA|length=2090bp|location=Sequence derived from alignment at KK037249.1:116279..118368- (Nannochloropsis gaditana)
TTCATGGATTCATGAGCGTCCTCACCGCACGGCAGGAGGAGGAGGAGGAC
GGGCAAGAACGCCTCCTGCTCGTGGGGAATACCCACCTGTTTTATCATCC
CATGGCGCAGCATATCCGGCTCATGCAGGTAGGAGGGGGGGGAGGAAGAG
AAAGAGGAAAGAGAAATATTGCCTTTATGTCCTGGTGTCGGGGGGTATAT
CAGGCAAAGGCTCGATGCGAGCTAAGCACTTACACTTGAGAATTGCCTCC
CCCTCGCTATCTCTGCCTCGCTCCCTCCCTTTCCCCCTCCCTTTCCTCGT
CCAGATGGCCACCCTGGTGAGAGAAATGACTGCCCGGCAGGGCGAGATCG
AGGACAAGTTCGGCGTGCGACCTCGTCTGGTCCTGTGCGGCGACCTGAAT
AGGTGAGAAAGGGAGAGAGGGGGAGAAGGAGGGAGCCCAGGAGGAAGGAG
GGTACTTGGCTCGTCCACCTCCTTTACTGTAAAGGGCCAGGGAGGGTGCC
AGATGCGAGCGCGTCCGCTGCGTACCTCTTCGCTCCTCTAACCCTCTTCT
CTTGATTTCCCTTTCCCTCCCCTGCTTCTTCCCTGCCGCTCCTTTCCTAG
CACCCCCACTACCGCCACGATCCGCTACCTGCGCGGGGAGACGATCGGCC
CGGAGGACGAAGTCTGGGAGCACCTCCACGTCTTCGGGTGGGGCAAGCGG
CAAGGCGAGGGAGAGGAAAAGGAGGAAGGGGAGGCGGCAGCGACGGCGGC
GGTCCTCGAAGCAGAAGAGGGAAAGAAGGGCGGGGAGGAGGGAGGGGATG
GGAAGGCTGTAGCGGTTGATGTTGGCAGGGTAAGTGGTAGCGCAGGGGCC
AGAGGCATGACGGTCTTATTTTTTCTCCCTTTCTGCTCCTTCCCTTCCTC
CCTCTGCATTCCTGGACACGCACCCTACATGCAATGGCATTGCGAACGTC
ATGTGCTGTTCAAGTTGGGCAAACCAAAATGTTGTGTCTAAGCAAGCGTG
CGCGCCATACAACCTTTTCTTGTCTTGTCTCCATTGTCTCATAGGAGAGT
AGGGGAAGAGAGACTCTCCTTTCCAGCCGCGCGACGCCGCGAGTGGAGGC
GCGGGAAGAAAAAGAGAAGGAGAAGAACTCTAAGGAGAAAGGGAGCATGG
CCTCAGACGGGGACGTGATCCCCACGCTGTGCTTGACACGACCTTTTTTC
AGTGCCTGTGGCTTACCCGACTTCACGAACTACGTGCAGGTGAGGGTTGA
GGACACGGCGGGGGGGATAGAGGGAAAGGGCAGAAGAGCTCAAATTATTT
TATCTTCTTTCCCTGTCTCCATCCGCCCACCGGTGCCATTATTCCACGCT
TTTTTTCCATATTAGGGCTTTGTCGAGACTTTGGATTACATTTTCTTGGA
GTCGGAGGCCCCAGTCCCATTGGATCCCTCCGGTGCGAGCTTCTCCGTGC
TGTCGGTAGGCGCCATGCCGACCAGGGAGGAGGCGGGTCAGGACACGGCG
TTGCCGTCCTGGCAGACGCCCTCGGACCATGTGAGCATCCTTTGCGATGT
CCGCGTGGAGTGAGGGAGGCGGAATTAGAGGAGGGGAGAGAGGAAGATGG
GGGCTGAAAACAGACGGGGGACGGCACTACATCTTCACGATTTTTGGGAG
GGGAATCATAGGTGGTGTATTGCGGTGACATAGAGAAAAGTCTCGATTGA
AACATAAATTGGGTCTTAGAAAGCATAACGGAAGTACTGATTCCTCCTGC
AAGGGGACCCTGGCTGTGAATGGTGGCTGGGCGGGTCTGTTTTGAGCCTT
AAGGGAATTTTGGCTTTCGATAGGAATACTCGAGGGTATTGTTCCCTGTA
GCAAGTGCATTCGATCATCGTTTTAACCTTTTTCTATTCGTCAGTCACAA
GTCTTGACCGTTCGCAATGAGGACGGTGAGATCGGTGCATTGACCCATTC
AATTCTCCACTGTCCTTCATCCTGCCGAGAATTGCCAATATCCACGCAGG
TTGTTGCTTTGTCGATCGCTTCCCTTGAAACATCCCCATGTTCCCCATCC
CGCATTGATCATACACCCATGTCATACCCCACCCTTTACC back to topCoding sequence (CDS) from alignment at KK037249.1:116279..118368- >rna8502 ID=rna8502|Name=rna8502|organism=Nannochloropsis gaditana|type=CDS|length=4185bp|location=Sequence derived from alignment at KK037249.1:116279..118368- (Nannochloropsis gaditana)
GGCTTTGTCGAGACTTTGGATTACATTTTCTTGGAGTCGGAGGCCCCAGT
CCCATTGGATCCCTCCGGTGCGAGCTTCTCCGTGCTGTCGGTAGGCGCCA
TGCCGACCAGGGAGGAGGCGGGTCAGGACACGGCGTTGCCGTCCTGGCAG
ACGCCCTCGGACCATGTGAGCATCCTTTGCGATGTCCGCGTGGAGTGAGA
GAGTAGGGGAAGAGAGACTCTCCTTTCCAGCCGCGCGACGCCGCGAGTGG
AGGCGCGGGAAGAAAAAGAGAAGGAGAAGAACTCTAAGGAGAAAGGGAGC
ATGGCCTCAGACGGGGACGTGATCCCCACGCTGTGCTTGACACGACCTTT
TTTCAGTGCCTGTGGCTTACCCGACTTCACGAACTACGTGCAGCACCCCC
ACTACCGCCACGATCCGCTACCTGCGCGGGGAGACGATCGGCCCGGAGGA
CGAAGTCTGGGAGCACCTCCACGTCTTCGGGTGGGGCAAGCGGCAAGGCG
AGGGAGAGGAAAAGGAGGAAGGGGAGGCGGCAGCGACGGCGGCGGTCCTC
GAAGCAGAAGAGGGAAAGAAGGGCGGGGAGGAGGGAGGGGATGGGAAGGC
TGTAGCGGTTGATGTTGGCAGGATGGCCACCCTGGTGAGAGAAATGACTG
CCCGGCAGGGCGAGATCGAGGACAAGTTCGGCGTGCGACCTCGTCTGGTC
CTGTGCGGCGACCTGAATAGATGAGCGTCCTCACCGCACGGCAGGAGGAG
GAGGAGGACGGGCAAGAACGCCTCCTGCTCGTGGGGAATACCCACCTGTT
TTATCATCCCATGGCGCAGCATATCCGGCTCATGCAGGGCTTTGTCGAGA
CTTTGGATTACATTTTCTTGGAGTCGGAGGCCCCAGTCCCATTGGATCCC
TCCGGTGCGAGCTTCTCCGTGCTGTCGGTAGGCGCCATGCCGACCAGGGA
GGAGGCGGGTCAGGACACGGCGTTGCCGTCCTGGCAGACGCCCTCGGACC
ATGTGAGCATCCTTTGCGATGTCCGCGTGGAGTGAGAGAGTAGGGGAAGA
GAGACTCTCCTTTCCAGCCGCGCGACGCCGCGAGTGGAGGCGCGGGAAGA
AAAAGAGAAGGAGAAGAACTCTAAGGAGAAAGGGAGCATGGCCTCAGACG
GGGACGTGATCCCCACGCTGTGCTTGACACGACCTTTTTTCAGTGCCTGT
GGCTTACCCGACTTCACGAACTACGTGCAGCACCCCCACTACCGCCACGA
TCCGCTACCTGCGCGGGGAGACGATCGGCCCGGAGGACGAAGTCTGGGAG
CACCTCCACGTCTTCGGGTGGGGCAAGCGGCAAGGCGAGGGAGAGGAAAA
GGAGGAAGGGGAGGCGGCAGCGACGGCGGCGGTCCTCGAAGCAGAAGAGG
GAAAGAAGGGCGGGGAGGAGGGAGGGGATGGGAAGGCTGTAGCGGTTGAT
GTTGGCAGGATGGCCACCCTGGTGAGAGAAATGACTGCCCGGCAGGGCGA
GATCGAGGACAAGTTCGGCGTGCGACCTCGTCTGGTCCTGTGCGGCGACC
TGAATAGATGAGCGTCCTCACCGCACGGCAGGAGGAGGAGGAGGACGGGC
AAGAACGCCTCCTGCTCGTGGGGAATACCCACCTGTTTTATCATCCCATG
GCGCAGCATATCCGGCTCATGCAGGGCTTTGTCGAGACTTTGGATTACAT
TTTCTTGGAGTCGGAGGCCCCAGTCCCATTGGATCCCTCCGGTGCGAGCT
TCTCCGTGCTGTCGGTAGGCGCCATGCCGACCAGGGAGGAGGCGGGTCAG
GACACGGCGTTGCCGTCCTGGCAGACGCCCTCGGACCATGTGAGCATCCT
TTGCGATGTCCGCGTGGAGTGAGAGAGTAGGGGAAGAGAGACTCTCCTTT
CCAGCCGCGCGACGCCGCGAGTGGAGGCGCGGGAAGAAAAAGAGAAGGAG
AAGAACTCTAAGGAGAAAGGGAGCATGGCCTCAGACGGGGACGTGATCCC
CACGCTGTGCTTGACACGACCTTTTTTCAGTGCCTGTGGCTTACCCGACT
TCACGAACTACGTGCAGCACCCCCACTACCGCCACGATCCGCTACCTGCG
CGGGGAGACGATCGGCCCGGAGGACGAAGTCTGGGAGCACCTCCACGTCT
TCGGGTGGGGCAAGCGGCAAGGCGAGGGAGAGGAAAAGGAGGAAGGGGAG
GCGGCAGCGACGGCGGCGGTCCTCGAAGCAGAAGAGGGAAAGAAGGGCGG
GGAGGAGGGAGGGGATGGGAAGGCTGTAGCGGTTGATGTTGGCAGGATGG
CCACCCTGGTGAGAGAAATGACTGCCCGGCAGGGCGAGATCGAGGACAAG
TTCGGCGTGCGACCTCGTCTGGTCCTGTGCGGCGACCTGAATAGATGAGC
GTCCTCACCGCACGGCAGGAGGAGGAGGAGGACGGGCAAGAACGCCTCCT
GCTCGTGGGGAATACCCACCTGTTTTATCATCCCATGGCGCAGCATATCC
GGCTCATGCAGGGCTTTGTCGAGACTTTGGATTACATTTTCTTGGAGTCG
GAGGCCCCAGTCCCATTGGATCCCTCCGGTGCGAGCTTCTCCGTGCTGTC
GGTAGGCGCCATGCCGACCAGGGAGGAGGCGGGTCAGGACACGGCGTTGC
CGTCCTGGCAGACGCCCTCGGACCATGTGAGCATCCTTTGCGATGTCCGC
GTGGAGTGAGAGAGTAGGGGAAGAGAGACTCTCCTTTCCAGCCGCGCGAC
GCCGCGAGTGGAGGCGCGGGAAGAAAAAGAGAAGGAGAAGAACTCTAAGG
AGAAAGGGAGCATGGCCTCAGACGGGGACGTGATCCCCACGCTGTGCTTG
ACACGACCTTTTTTCAGTGCCTGTGGCTTACCCGACTTCACGAACTACGT
GCAGCACCCCCACTACCGCCACGATCCGCTACCTGCGCGGGGAGACGATC
GGCCCGGAGGACGAAGTCTGGGAGCACCTCCACGTCTTCGGGTGGGGCAA
GCGGCAAGGCGAGGGAGAGGAAAAGGAGGAAGGGGAGGCGGCAGCGACGG
CGGCGGTCCTCGAAGCAGAAGAGGGAAAGAAGGGCGGGGAGGAGGGAGGG
GATGGGAAGGCTGTAGCGGTTGATGTTGGCAGGATGGCCACCCTGGTGAG
AGAAATGACTGCCCGGCAGGGCGAGATCGAGGACAAGTTCGGCGTGCGAC
CTCGTCTGGTCCTGTGCGGCGACCTGAATAGATGAGCGTCCTCACCGCAC
GGCAGGAGGAGGAGGAGGACGGGCAAGAACGCCTCCTGCTCGTGGGGAAT
ACCCACCTGTTTTATCATCCCATGGCGCAGCATATCCGGCTCATGCAGGG
CTTTGTCGAGACTTTGGATTACATTTTCTTGGAGTCGGAGGCCCCAGTCC
CATTGGATCCCTCCGGTGCGAGCTTCTCCGTGCTGTCGGTAGGCGCCATG
CCGACCAGGGAGGAGGCGGGTCAGGACACGGCGTTGCCGTCCTGGCAGAC
GCCCTCGGACCATGTGAGCATCCTTTGCGATGTCCGCGTGGAGTGAGAGA
GTAGGGGAAGAGAGACTCTCCTTTCCAGCCGCGCGACGCCGCGAGTGGAG
GCGCGGGAAGAAAAAGAGAAGGAGAAGAACTCTAAGGAGAAAGGGAGCAT
GGCCTCAGACGGGGACGTGATCCCCACGCTGTGCTTGACACGACCTTTTT
TCAGTGCCTGTGGCTTACCCGACTTCACGAACTACGTGCAGCACCCCCAC
TACCGCCACGATCCGCTACCTGCGCGGGGAGACGATCGGCCCGGAGGACG
AAGTCTGGGAGCACCTCCACGTCTTCGGGTGGGGCAAGCGGCAAGGCGAG
GGAGAGGAAAAGGAGGAAGGGGAGGCGGCAGCGACGGCGGCGGTCCTCGA
AGCAGAAGAGGGAAAGAAGGGCGGGGAGGAGGGAGGGGATGGGAAGGCTG
TAGCGGTTGATGTTGGCAGGATGGCCACCCTGGTGAGAGAAATGACTGCC
CGGCAGGGCGAGATCGAGGACAAGTTCGGCGTGCGACCTCGTCTGGTCCT
GTGCGGCGACCTGAATAGATGAGCGTCCTCACCGCACGGCAGGAGGAGGA
GGAGGACGGGCAAGAACGCCTCCTGCTCGTGGGGAATACCCACCTGTTTT
ATCATCCCATGGCGCAGCATATCCGGCTCATGCAG back to top
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