EWM22200.1, cds8475 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|585102639|gb|EWM22200.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 Query: 1 MSVLTARQEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 278 MSVLTARQEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE Sbjct: 1 MSVLTARQEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 278
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|585102638|gb|EWM22199.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0 Identity = 272/276 (98.55%), Postives = 273/276 (98.91%), Query Frame = 0 Query: 3 VLTARQEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 278 VL +EEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE Sbjct: 44 VLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 319
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|553185093|ref|XP_005854200.1| (2 -phosphodiesterase 12-like protein [Nannochloropsis gaditana CCMP526] >gi|422294864|gb|EKU22164.1| 2 -phosphodiesterase 12-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 481.485 bits (1238), Expect = 1.610e-169 Identity = 236/241 (97.93%), Postives = 239/241 (99.17%), Query Frame = 0 Query: 38 MQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 278 ++MATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVD GRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQ PSDHVSILCDVRV+ Sbjct: 106 LEMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDDGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQAPSDHVSILCDVRVQ 346
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|298711454|emb|CBJ32593.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 115.161 bits (287), Expect = 3.187e-25 Identity = 88/288 (30.56%), Postives = 128/288 (44.44%), Query Frame = 0 Query: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPR-----VEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFS---ACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVL--------------------SVGAMPTREEA---GQDTALPSWQTPSDHVSILCDV 275 L+V NTHL++HP A HIRLMQ+ TLV ++ + ++ + G+RP ++L GDLNS P +RYL G+ IGP+ ++WE++ F WG R + G AA AA + +E +S A+PR E + + GS A +P + R F A G P FTN+ F +TLDY+F+E P+ A+ +VL + P EE LPS PSDHVS++ D+ Sbjct: 451 LIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLAR-GLRPAVILGGDLNS-PPDGPVRYLMGDLIGPDSDLWENMGTFKWGDRFFDELPTTSGAAATAAAPPPPPPTSRIPDEK---------------------ASTASPRPNNATNNNDNETARASHPSVAGSKAKPSPFLPNVPYLRTPFDLQLASGTPAFTNFTPDFTDTLDYVFIEGAGADSGTPTTAAEAVLAVEGAGGTGGGGEGGGGGAAAAAVAPMPEEGPLRATTPGLPSETFPSDHVSLVVDL 715
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|407425222|gb|EKF39341.1| (hypothetical protein MOQ_000436 [Trypanosoma cruzi marinkellei]) HSP 1 Score: 94.3597 bits (233), Expect = 3.783e-18 Identity = 71/257 (27.63%), Postives = 102/257 (39.69%), Query Frame = 0 Query: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 275 L+VGNTHLFYH A HIRL+Q+ TL+ ++ +P +VLCGD N TPTT R + E W+ +F WG + G EE E A EEG + E + + P + + + + G +P +TNY F E +DYIF S SVL +P E ++ ALP+ Q PSDH++++ D+ Sbjct: 407 LIVGNTHLFYHANACHIRLLQVYTLLHKLKIFAAS-------QPSVVLCGDFNFTPTTGGYRLVTKGQTEAEHHSWKKGELFYWGCDRMLGLSTEEMEGVEETA-----------EEGASSSVPVTQPDKRQPPFEAFRETISAPL-------------QLRDAYSETGQELP----------------WTNYAMTFREVIDYIFF----------SPTRLSVLRTVPIPPESELSENVALPNKQYPSDHLALIADL 606
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|588320623|emb|CCW60623.1| (unnamed protein product [Phytomonas sp. isolate EM1]) HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-16 Identity = 74/276 (26.81%), Postives = 115/276 (41.67%), Query Frame = 0 Query: 14 GQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMT------ARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDG--------DVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 275 GQE +++G+THLFYH A HIR++Q L+ + ++ E+ + G R +VLCGD N T T R + + WE +F WG + G +EE A + A AVD G + + +V E+ +EK K S A+ D+ L L + +TNY F E +DY+F S+ S VL +P E ++ ALP+ + PSDH++++ D+ Sbjct: 631 GQE--VVLGSTHLFYHANACHIRILQAYMLLHRLYQMATAGIKEAELAEGRGRRRSVVLCGDFNFTHCTGAYRLVTTGQVEATHHSWEKGRLFWWGCDRQLGCSEEELLAL-----------------NPNTPAAAVDAGDRTDAQS------GPEKVAPAEDNSQEKGEASKPSGAAKSPLEVFFKDDLHTPLALIDAYDRTDPAMQWTNYTLTFREVIDYVFFSSD----------SIDVLQTVPIPPEFELSENHALPNAKYPSDHLALIADL 871
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|554938412|gb|ESL08899.1| (hypothetical protein TRSC58_03390 [Trypanosoma rangeli SC58]) HSP 1 Score: 85.8853 bits (211), Expect = 2.849e-15 Identity = 77/261 (29.50%), Postives = 110/261 (42.15%), Query Frame = 0 Query: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGV-RPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEG---EEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 275 LLVGNTHLFYH A HIRL+Q L++++ + F RP ++LCGD N T TT R L E W+ +F WG + EE E GE A++A E+ K TP +EA E K + K + + G+ + ++NY F E +DYIF AP L SVL +P E ++ ALP+ + PSDH++++ D+ Sbjct: 407 LLVGNTHLFYHANACHIRLLQAYMLLQKL--------NNFAASRPCVLLCGDFNFTHTTGGYRLLTSGQAEAEHHSWKKGELFYWGCDRMLNVGTEETEVGEKVASSAAPATEQVK-----------------------------HQTP-LEAFRETLKAP-LQLKDAYSETGEKM----------------TWSNYTMTFREVIDYIFF---APTRL-------SVLRTVPIPPESELSENVALPNKRYPSDHLALIADL 602
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|1115872847|emb|SCU69012.1| (Endonuclease/Exonuclease/phosphatase family, putative [Trypanosoma equiperdum]) HSP 1 Score: 84.7297 bits (208), Expect = 7.129e-15 Identity = 74/269 (27.51%), Postives = 110/269 (40.89%), Query Frame = 0 Query: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMAS-DGDVIPTLCLTRP-------FFSACGLPD----FTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 275 L+VGNTHLFYH A HIRL+Q+ L+ ++ +R R +VLCGD N T TT + + W VF WG + G EG A +A V + ++G E + + S A+ A S + G +S D P + R F A G+ D +TNY F E +DY+F + V+ +P E ++ ALP+ + PSDHV+++ D+ Sbjct: 409 LVVGNTHLFYHANACHIRLLQVYMLLHKLKSRSDS-------RRGVVLCGDFNFTHTTGGYKLVTTGRTEASHHSWAKGEVFHWGCDRMLGINAAEG-AGGSAEVETGLDVRRGKGESATCASKNNKNDTNNNNESNGNSVDASTSCAA--------TSADTGVASSVKADYRPPFDVFRADMEAPMQFTDAYGVTDPEMPWTNYTMTFREVIDYVFFNPD----------RLLVVQTIPIPPESELSENVALPNRKYPSDHVALIADL 651
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|72387938|ref|XP_844393.1| (hypothetical protein [Trypanosoma brucei brucei TREU927] >gi|62358601|gb|AAX79061.1| hypothetical protein, conserved [Trypanosoma brucei] >gi|70800926|gb|AAZ10834.1| hypothetical protein, conserved [Trypanosoma brucei brucei TREU927]) HSP 1 Score: 84.7297 bits (208), Expect = 7.613e-15 Identity = 74/269 (27.51%), Postives = 110/269 (40.89%), Query Frame = 0 Query: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMAS-DGDVIPTLCLTRP-------FFSACGLPD----FTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 275 L+VGNTHLFYH A HIRL+Q+ L+ ++ +R R +VLCGD N T TT + + W VF WG + G EG A +A V + ++G E + + S A+ A S + G +S D P + R F A G+ D +TNY F E +DY+F + V+ +P E ++ ALP+ + PSDHV+++ D+ Sbjct: 409 LVVGNTHLFYHANACHIRLLQVYMLLHKLKSRSDS-------RRGVVLCGDFNFTHTTGGYKLVTTGRTEASHHSWAKGEVFHWGCDRMLGINAAEG-AGGSAEVETGLDVRRGKGESATCASKNNKNDTNNNNESNGNSVDASTSCAA--------TSADTGVASSVKADYRPPFDVFRADMEAPMQFTDAYGVTDPEMPWTNYTMTFREVIDYVFFNPD----------RLLVVQTIPIPPESELSENVALPNRKYPSDHVALIADL 651
BLAST of EWM22200.1 vs. NCBI_GenBank
Match: gi|1177798715|gb|ORC93613.1| (2,5-phosphodiesterase [Trypanosoma theileri]) HSP 1 Score: 83.5741 bits (205), Expect = 1.610e-14 Identity = 78/267 (29.21%), Postives = 109/267 (40.82%), Query Frame = 0 Query: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDG------KAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPD----FTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 275 LLVGNTHLFYH A HIRL+Q+ L+ ++ + E++ +VLCGD N T T R + W+ +F WG + G +E EAEEG +E + ++ E + R P V RE D+ L LT A GL D +TNY F E +DYIF S + SVL +P E Q+ ALP+ PSDH++++ D+ Sbjct: 440 LLVGNTHLFYHANACHIRLLQIYMLLHKLKS-LSELQSL-----PVVLCGDFNFTHITGGYRLVTAGRTEASHPSWDKGELFHWGCDRLLGISEE-----------EAEEGIPTSDENHPALPPITKTTTEKEKETKTEKDEEMQVERQPPFVAFRE------------------DLDAPLQLT----DAYGLTDPNLPWTNYTMTFREVIDYIFF----------SPSRLSVLRTVPIPAESELSQNVALPNKLYPSDHIALIADL 657 The following BLAST results are available for this feature:
BLAST of EWM22200.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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