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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100337g1.993.mrna |
| Orig protein id | gnl|cribi|Naga_100337g1.993 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:84254..85522 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8489 ID=rna8489|Name=rna8489|organism=Nannochloropsis gaditana|type=mRNA|length=1723bp
CGTGATCACTGGCTTTCTCTCGACTAATTAATGCCTGTACGCGCGCACAT
TTGCCATTAAGCGTGTCCGAGGGAGTCAATGTGCGACCATCTGGCCTTTA
ACGCGGTATATTGGCTTGCATTTTTGGCTTCTTCCAGATGCTAAGCTACT
GGGAAGCCTGAATACATAAGGCTCAGCTCTGATTTACATTTGCGTTTCCT
TTTTCAACATTGATTCAGTCGACAGGTGGATCGCTGAAGGGAAAGTACCT
TCTAAGTGGGGTTTCTGCTGGGAGCGCTGCACAAGTGTCAGCAGCAAGAC
TGACTTTCCATTCCTGCCAAGGCTGCGGCCTCAGCCTTGTCCTGTCGGCT
TGTGGCCTGTCATGGCGGACACCACTTCTGAGGAAAAAAAGAAGAAACTT
TCTCGTAAAGAACGCGAGCGGGAGCTGCGGGCGTTGACGTCGGACGGGCG
GGGTTGCGGTTTTAAGAAAGACTTAGTCGCAGACAGGCACTTGGACGACC
AAAGGTATGAACGTGAGATCGCGTTCAAGAAGCAGCAACAGGCTGCCGCT
GCCGCTGCAAAACACAGTAGCGGGGGCAAAGACAAGGCAGGCGCCATGAT
TCCAGGTGTGACGCTGGGGGCCCCACCACCTTCCGCGGCATTCGACGCGT
TGATTCGGATGGAAGCTGGCCTTGGACAACGGACCATCCACGACAATATC
AACGACCCCAACCGACCGAGCTGGGAGGATTACAAGAAGGCGAAGGCCGA
TAAACTCGACCTGGTGGGTGCCGATGAACGGAAAATGATTGAATATCGGG
CCCAGCTGGACGCAGAGCGGGCTCGGCGTTTGGCTCAAAACCGTGGGGAG
AAGGAGGAGAAGGATGGGAAGAAGAAGAGTCGGCGAAAGGAGGGAAGGAA
GAAAAAGGGGAGGAAGAAGGACGAGAGGAAGCGGGAGGGGAAAAAGAAGA
AGCATCACAAGAAGGAGGACAAGAAAAAATCTCACAGGAAGCGAAAGCGT
TCCTCGTCCGAGGAAGGGGAGGAGATCAAACGCTCAGAAGGGAGGAAAGA
AGAAAGGGGTGAGAAGAGGCAGAGAAACGACGAAGTAGGACAAGAAAGAG
CGGAGAATAAGGCCGACGGCGGCGGGGAGATGGAGACGGAGAGCGTCCCG
TTGGCAGGGGAGGGTCAAGAAGGAGAGAGAAAGCCACGGAGTCTGAAAAA
AAAGAGGCGACGTCGAGATGTTTCTTCGTCCTCGTCCTCCTCCCCCTCCT
CCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCGGATACCGAAGGCTCC
GGTAGCTCGGGCCCGGTACAGCTTTCCTCCTTCCTGCGGGGCGACAAGGA
CGGCAGCGACAGCGATTAATCGACCCATTCAAGAATAAACATGACAAAGC
ACGGACAATGCCCTGTCTAAAACGAGGGAATCTTTTGCTTTCCACGTTTC
AACGTTGCTTATGGCGCGTTTTCAAGGGCCTAAACCTTTCCTAGCGCATT
TCGTGGTCAAAAATGCATCGCATGCTGTCCCACGGCCCTTCGCAGGCCTC
GTCCACCGCTTGCACGTAACGCGTGTGCAGATGCCGTTTCAAGTCCGCGG
GGGCCAACAGTCCATCGGGCAATACATTTCCCTCTGTACCTGCTTTCCAA
CCTTCCTCTTCCCTTGAAATACGAGTCGAGTCTGCTATGGTTTGCGGGGT
GGGTAGTAACGAGGGCAGTCGCA back to topprotein sequence of rna8489 >rna8489-protein ID=rna8489-protein|Name=rna8489|organism=Nannochloropsis gaditana|type=polypeptide|length=254bp
PPSLPLSFPPSLLPSLPTRPARLRAPFHPARALHLRLYCLLDGRSRAQPL
CLPDLHGLLPFGSHLRRCSGLGRERPLPGRAHGHRPRPPCHHRLLALLRG
LHQREELAHGGAMVSLHVLHQVELQRLCRQSVQGDDLRLPGSGGQRLHEH
GGAGLGPLFHGRIWPVAMRACLGGDHPHLCRPGVRGLAGDESKILEDDPA
LQPSHAHHLVCGGSAFCVTDSHGREIKSSRVALGLQDMPYSASYIAIYSC
EAFR back to topmRNA from alignment at KK037249.1:84254..85522- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8489 ID=rna8489|Name=rna8489|organism=Nannochloropsis gaditana|type=mRNA|length=1269bp|location=Sequence derived from alignment at KK037249.1:84254..85522- (Nannochloropsis gaditana)
CCTCCTTCCCTCCCTCTCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCC
TACCCGCCCAGCTCGTCTCCGAGCTCCCTTTCACCCTGCTAGGGCCCTTC
ATCTTCGCCTGTATTGCCTACTGGATGGTCGGTCTCGAGCCCAGCCTCTC
TGCCTTCCTGATCTTCACGGGCTTCTGCCTTTTGGAAGCCATTTGCGCCG
TTGCTCTGGGCTTGGTCGTGAGCGCCCTCTCCCGGGACGTGCCCACGGCC
ACCGCCCTCGCCCCCCCTGTCACCATCGTCTTCTTGCTCTTCTCCGGGGT
CTTCATCAACGTGAAGAGCTTGCCCACGGGGGCGCAATGGTGTCCTTACA
TGTCCTTCATCAAGTGGAGCTTCAACGCCTTTGCCGTCAATCAGTTCAAG
GGGATGACCTTCGCCTGCCCGGATCCGGAGGGCAAAGGCTGCATGAGCAC
GGGGGAGCAGGTCTTGGCCCTTTATTCCATGGACGAATATGGCCTGTGGC
AATGCGCGCTTGCCTTGGTGGGGATCACCCTCATCTTTGCCGGCCTGGGG
TACGCGGTCTTGCGGGTGACGAGTCAAAAATACTTGAAGATGATCCCGCC
CTCCAACCCTCCCATGCCCACCATCTTGTCTGCGGAGGGTCCGCATTCTG
TGTAACGGACTCGCATGGTCGGGAAATAAAGAGCAGTCGGGTTGCCTTGG
GTCTGCAAGATATGCCTTATTCGGCAAGCTATATAGCCATATACTCTTGT
GAAGCCTTTCGTTGAATCGATACGGGCTGAAATTTACACATGAGGAGGCG
TGTGGGGACGTTTGTCAGAAGACCGTGCCACTCTTGACGCAGCATCGGGC
GTGATAAAAAAGTAGGAATATTAGACCATCGCTCTCCAGGGGCCTAGTAT
GTAAAATAAATGGCTTGCTGCTCTTGGGGAAAGAAGTGTCGAAACGGTCA
ACGAATGTGCTACAGGGGTCCCTGAGGTGTCCCCTGAGGTGTCCCAAAGG
TCGCTTCAGAGGAGGTGTGTCACTTCATACAAAATTATGGCTTGCGACGT
CGTGATTTGGTTCGTCTTCGGTAATTTATGCAGAACCATACGATCATTGA
TGCCATTAGTGCAGTTTGATTATTATAGGAGGCATACGATGTACGTAGGG
GCCTCGCTCGTATGTGTCAATGAAAGTGTGGAGTGAGCGTTGTCAGAACA
CGGAGAGACACTTGGGGCGTCCTGTCCTGAATTAAAAATGAAAACTGATT
GCAAACCATGTTTGTGTCA back to topCoding sequence (CDS) from alignment at KK037249.1:84254..85522- >rna8489 ID=rna8489|Name=rna8489|organism=Nannochloropsis gaditana|type=CDS|length=765bp|location=Sequence derived from alignment at KK037249.1:84254..85522- (Nannochloropsis gaditana)
CCTCCTTCCCTCCCTCTCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCC
TACCCGCCCAGCTCGTCTCCGAGCTCCCTTTCACCCTGCTAGGGCCCTTC
ATCTTCGCCTGTATTGCCTACTGGATGGTCGGTCTCGAGCCCAGCCTCTC
TGCCTTCCTGATCTTCACGGGCTTCTGCCTTTTGGAAGCCATTTGCGCCG
TTGCTCTGGGCTTGGTCGTGAGCGCCCTCTCCCGGGACGTGCCCACGGCC
ACCGCCCTCGCCCCCCCTGTCACCATCGTCTTCTTGCTCTTCTCCGGGGT
CTTCATCAACGTGAAGAGCTTGCCCACGGGGGCGCAATGGTGTCCTTACA
TGTCCTTCATCAAGTGGAGCTTCAACGCCTTTGCCGTCAATCAGTTCAAG
GGGATGACCTTCGCCTGCCCGGATCCGGAGGGCAAAGGCTGCATGAGCAC
GGGGGAGCAGGTCTTGGCCCTTTATTCCATGGACGAATATGGCCTGTGGC
AATGCGCGCTTGCCTTGGTGGGGATCACCCTCATCTTTGCCGGCCTGGGG
TACGCGGTCTTGCGGGTGACGAGTCAAAAATACTTGAAGATGATCCCGCC
CTCCAACCCTCCCATGCCCACCATCTTGTCTGCGGAGGGTCCGCATTCTG
TGTAACGGACTCGCATGGTCGGGAAATAAAGAGCAGTCGGGTTGCCTTGG
GTCTGCAAGATATGCCTTATTCGGCAAGCTATATAGCCATATACTCTTGT
GAAGCCTTTCGTTGA back to top
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