EWM22211.1, cds8462 (CDS) Nannochloropsis gaditana

Overview
NameEWM22211.1
Unique Namecds8462
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:84758..85522 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22211.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100337g1.993.mrna
GbkeyCDS
End range.
End range85522
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:84758..85522 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22211.1 vs. NCBI_GenBank
Match: gi|585102659|gb|EWM22211.1| (hypothetical protein Naga_100337g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 490.73 bits (1262), Expect = 5.141e-175
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 
Query:    1 PPSLPLSFPPSLLPSLPTRPARLRAPFHPARALHLRLYCLLDGRSRAQPLCLPDLHGLLPFGSHLRRCSGLGRERPLPGRAHGHRPRPPCHHRLLALLRGLHQREELAHGGAMVSLHVLHQVELQRLCRQSVQGDDLRLPGSGGQRLHEHGGAGLGPLFHGRIWPVAMRACLGGDHPHLCRPGVRGLAGDESKILEDDPALQPSHAHHLVCGGSAFCVTDSHGREIKSSRVALGLQDMPYSASYIAIYSCEAFR 254
            PPSLPLSFPPSLLPSLPTRPARLRAPFHPARALHLRLYCLLDGRSRAQPLCLPDLHGLLPFGSHLRRCSGLGRERPLPGRAHGHRPRPPCHHRLLALLRGLHQREELAHGGAMVSLHVLHQVELQRLCRQSVQGDDLRLPGSGGQRLHEHGGAGLGPLFHGRIWPVAMRACLGGDHPHLCRPGVRGLAGDESKILEDDPALQPSHAHHLVCGGSAFCVTDSHGREIKSSRVALGLQDMPYSASYIAIYSCEAFR
Sbjct:    1 PPSLPLSFPPSLLPSLPTRPARLRAPFHPARALHLRLYCLLDGRSRAQPLCLPDLHGLLPFGSHLRRCSGLGRERPLPGRAHGHRPRPPCHHRLLALLRGLHQREELAHGGAMVSLHVLHQVELQRLCRQSVQGDDLRLPGSGGQRLHEHGGAGLGPLFHGRIWPVAMRACLGGDHPHLCRPGVRGLAGDESKILEDDPALQPSHAHHLVCGGSAFCVTDSHGREIKSSRVALGLQDMPYSASYIAIYSCEAFR 254
The following BLAST results are available for this feature:
BLAST of EWM22211.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102659|gb|EWM22211.1|5.141e-175100.00hypothetical protein Naga_100337g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8489rna8489Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications